prot_Ecto-sp13_S_contig16644.4763.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16644.4763.1
Unique Nameprot_Ecto-sp13_S_contig16644.4763.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16644.4763.1 vs. uniprot
Match: D7FMZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ7_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 5.090e-169
Identity = 245/253 (96.84%), Postives = 249/253 (98.42%), Query Frame = 0 
Query:    1 MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRWSVRQLLSISSSLPDNSRFIFSGALVPKQIKRILKMKGLSAVVARDAESVVSMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANPRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVTTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPESSEWFTGLRGARRGPIMWTFNYEL 253
            MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSR SVRQLLSISSSLPDNSRFIFSGAL+PKQIKRILKMKGLSAVVARDAESVV+MEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGAN RGPVGSLVSGLRTFVRIQEGQSVDDVAEIV TIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGP+S+ WFTGLRGARRGPIMWTFNYEL
Sbjct:   13 MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSR-SVRQLLSISSSLPDNSRFIFSGALIPKQIKRILKMKGLSAVVARDAESVVAMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANQRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVNTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPKSAGWFTGLRGARRGPIMWTFNYEL 264
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BLAST of mRNA_Ecto-sp13_S_contig16644.4763.1 vs. uniprot
Match: A0A836CMK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.280e-52
Identity = 101/255 (39.61%), Postives = 160/255 (62.75%), Query Frame = 0 
Query:    1 MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRWSVRQLLSISSSLPDNSRFIFSGALVPKQIKRILKMKGLSAVVARDAESVVSMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANPRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVTTIE--QTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPESS-EWFTGLRGARRGPIMWTFNYE 252
            ++ D ++L+   T IT+VK +G VPASS++VYDC+HG+WLL Q+AYDRKI+LF+SR S   +  +++ +PD+++ +F+GA +PK  KR+LK++ L +VV  DA +  ++ +++  ER RLAAKGLS++S++RERYL   GG    A    P  +++  +R F+++ E  S    A   T  E  + C  + V+GLWG   +      +L+ V+       L+V + + G E S +W  GL G  RG I+WTF +E
Sbjct:   47 VDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASR-SAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGG----AQLAPPDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWG---EGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGL-GEGRGSIIWTFEFE 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16644.4763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMZ7_ECTSI5.090e-16996.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMK3_9STRA2.280e-5239.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16644contigEcto-sp13_S_contig16644:1252..3355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16644.4763.1mRNA_Ecto-sp13_S_contig16644.4763.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16644 1228..3355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16644.4763.1 ID=prot_Ecto-sp13_S_contig16644.4763.1|Name=mRNA_Ecto-sp13_S_contig16644.4763.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKI
RLFSSRWSVRQLLSISSSLPDNSRFIFSGALVPKQIKRILKMKGLSAVVA
RDAESVVSMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANPRG
PVGSLVSGLRTFVRIQEGQSVDDVAEIVTTIEQTCRNISVVGLWGGDMDP
ETCLNMLEAVRTKSGISNLRVAMEHLGPESSEWFTGLRGARRGPIMWTFN
YEL*
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