prot_Ecto-sp13_S_contig16643.4762.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16643.4762.1
Unique Nameprot_Ecto-sp13_S_contig16643.4762.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16643.4762.1 vs. uniprot
Match: A0A6H5LAX6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAX6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.870e-10
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:   59 DPVRRRGSRIFKPSKDGFAVRQRQHHNDHLSP 90
            DPVRRRGSRI KP KDGFAVRQRQHHNDHLSP
Sbjct:    9 DPVRRRGSRIIKPWKDGFAVRQRQHHNDHLSP 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16643.4762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LAX6_9PHAE1.870e-1093.75EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16643contigEcto-sp13_S_contig16643:1135..3010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16643.4762.1mRNA_Ecto-sp13_S_contig16643.4762.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16643 1135..3010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16643.4762.1 ID=prot_Ecto-sp13_S_contig16643.4762.1|Name=mRNA_Ecto-sp13_S_contig16643.4762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MGTSRELGAGLAGRTCLHKHQRRRRREKERECRARSPRAENTNAWTILLT
GQAARSTIDPVRRRGSRIFKPSKDGFAVRQRQHHNDHLSP
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