mRNA_Ecto-sp13_S_contig16638.4757.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16638.4757.1
Unique NamemRNA_Ecto-sp13_S_contig16638.4757.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 1.140e-133
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSSS 645
            MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEV+ EGDLGNDAFWILALGG+GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVL KAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSSS
Sbjct:  295 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVTTEGDLGNDAFWILALGGIGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSSS 509          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 1.930e-127
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETT 636
            MNQ+NQDIHSSVKDS YVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFA IY+VY+TG VS EGDLG+DAFWILALGG GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVL KAVFGWI+TI+VCALTCSVIFAQGAYAPYVYDTIILPETT
Sbjct:  239 MNQINQDIHSSVKDSGYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAAIYLVYSTGVVSSEGDLGDDAFWILALGGFGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIVTIIVCALTCSVIFAQGAYAPYVYDTIILPETT 450          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 2.340e-124
Identity = 196/215 (91.16%), Postives = 207/215 (96.28%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSSS 645
            +NQ+N+D+HSSVK+SEYVSQIHDNAE+FDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFA IYIVYTTG VS EGDLG++AFWILALGG GIV GLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMM+IIGTRLEIPLSTTHCQVGATTGVALLEG GGVNGTVLGKAVFGWIITI+VCALTCSVIFAQGAYAPYVYDTI LP +TSSS
Sbjct:  296 INQLNKDVHSSVKESEYVSQIHDNAEQFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVSSEGDLGDNAFWILALGGFGIVTGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMIIIGTRLEIPLSTTHCQVGATTGVALLEGTGGVNGTVLGKAVFGWIITIIVCALTCSVIFAQGAYAPYVYDTIDLPTSTSSS 510          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 1.970e-113
Identity = 180/215 (83.72%), Postives = 196/215 (91.16%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSSS 645
            MNQMNQDI+SSVKDSEYV+QIHDNAEKFDPR EE FKYVQ+FTAICDSFSHGANDVANAMGPFA IY VYTTGEV ++G+LGN+AFWILA GGLG+VAGLA+YGY IIAAIGVKIAKITPSRGFAIELGSA+ VIIGTRLEIPLSTTHCQVGAT GVALLEG+GGVNG VL KA+FGW++TIVVC LTCS +FAQGAYAPY YD I    +TSSS
Sbjct:  306 MNQMNQDIYSSVKDSEYVNQIHDNAEKFDPRTEEVFKYVQIFTAICDSFSHGANDVANAMGPFASIYFVYTTGEVREDGNLGNNAFWILAFGGLGMVAGLALYGYNIIAAIGVKIAKITPSRGFAIELGSALTVIIGTRLEIPLSTTHCQVGATAGVALLEGSGGVNGIVLAKAIFGWVVTIVVCGLTCSALFAQGAYAPYAYDIIDDLASTSSS 520          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 2.360e-97
Identity = 157/212 (74.06%), Postives = 183/212 (86.32%), Query Frame = 1
Query:    7 QMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPETTSS 642
            Q++QD+H++VKD++YV  IH+NAE+ DPR E+AFKYVQVFTAICDSFSHGANDVANAMGPFA IYIVYTTG V +E +LGND FWILALGG GIVAGL IYGYKII+AIGVKI K+TPSR F+I+LGSA+M+IIGTRLEIP S THC+VGATTGVALLEG  G+N  V+GK V GWI T +VC +TCS +FAQGAYAPY YDTI +  +TSS
Sbjct:  298 QLDQDVHATVKDNDYVDAIHENAERSDPRTEQAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVEEEKNLGNDMFWILALGGAGIVAGLTIYGYKIISAIGVKIPKVTPSRCFSIKLGSAIMIIIGTRLEIPFSPTHCKVGATTGVALLEGLDGINLNVVGKTVLGWITTSLVCGITCSGLFAQGAYAPYAYDTIDMSPSTSS 509          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A7S4F699_CHRCT (Phosphate transporter n=5 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F699_CHRCT)

HSP 1 Score: 270 bits (689), Expect = 1.200e-78
Identity = 131/197 (66.50%), Postives = 163/197 (82.74%), Query Frame = 1
Query:   10 MNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAP 600
            MN DIH+S+++ E V  +HDNAEKFDP AE  F+Y+QVFTAICDSF+HGANDVANAMGPF  IY++Y TG+VSK+ D+G+DA+WILALGG GI  GL +YGYKI+ AIGVK+A ITPSRGF+IELG+A+++IIG+ L +PLSTTHCQVGATTGVALLEGA G+N  VLGK   GW+IT++V   +  ++ AQG  AP
Sbjct:  342 MNVDIHASIEEDEKVQALHDNAEKFDPMAEAVFRYIQVFTAICDSFAHGANDVANAMGPFMAIYVIYDTGKVSKKADVGDDAYWILALGGAGIGIGLLLYGYKIMRAIGVKLAVITPSRGFSIELGAAIVIIIGSYLGLPLSTTHCQVGATTGVALLEGAKGINKWVLGKTCVGWVITLIVVGFSTGLLMAQGINAP 538          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A7S3YL38_9EUKA (Phosphate transporter n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YL38_9EUKA)

HSP 1 Score: 259 bits (663), Expect = 4.340e-75
Identity = 127/199 (63.82%), Postives = 155/199 (77.89%), Query Frame = 1
Query:    4 NQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAP 600
            N +N+D+H   +  +    IHDNAE FDPRAEE FKY+QVFTA+CD+F+HGANDVANAMGPFA  Y+++  GEVSK+ +LG DA+WILA+GGLGIV GLA YGY I+ AIG+K+AKITPSRG  IELGSA ++I G+RLE+PLSTTHCQVGAT GVA LEG+ G+N  + GK V GW+IT+ V     SV  AQ  YAP
Sbjct:  367 NGVNKDLHEITEIDDRTKSIHDNAEVFDPRAEEVFKYLQVFTAMCDAFAHGANDVANAMGPFAACYMIWREGEVSKKAELGADAYWILAIGGLGIVVGLATYGYHIVRAIGIKLAKITPSRGTCIELGSAAVIITGSRLELPLSTTHCQVGATMGVAALEGSAGINWWIFGKTVVGWVITLAVVGAMASVFMAQAIYAP 565          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A7S4BSB8_CHRCT (Phosphate transporter n=7 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BSB8_CHRCT)

HSP 1 Score: 258 bits (660), Expect = 5.610e-74
Identity = 125/197 (63.45%), Postives = 160/197 (81.22%), Query Frame = 1
Query:   10 MNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAP 600
            +N D+H ++++   V  +HDNAEKFDP AE  F+Y+QVFTAICDSF+HGANDVANAMGPF  IY++Y TG+VSK+ D+G+DA+WILALGG+GI  GL +YGY I+ AIGVK+A ITPSRGF+IELG+A+++IIG+ L +PLSTTHCQVGATTGVALLEGA G+N  VL K   GW+IT++V   +  ++ AQG  AP
Sbjct:  388 INVDVHKAIQEDVEVQALHDNAEKFDPMAEAVFRYIQVFTAICDSFAHGANDVANAMGPFMAIYVIYDTGKVSKKADVGDDAYWILALGGVGIGIGLLLYGYNIMRAIGVKLAVITPSRGFSIELGAAIVIIIGSYLGLPLSTTHCQVGATTGVALLEGAKGINKWVLLKTAVGWVITLIVVGFSTGLLVAQGINAP 584          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 252 bits (644), Expect = 6.560e-73
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1
Query:   10 MNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYV 606
            +N D+H+++ D    + IHD AEKFD + EE FK +QVFTA CD+F HGANDVAN++GP+A IYI+YT   V    DLG DA+WIL LGGLGIV GLA YGYKI+AAIGV+I++ITPSRGF IE+G+ ++V++G+RLE+PLSTTHCQVGAT GVAL+E  GG+N  +LG   FGW+ T+VV   T +++F QGAYAP V
Sbjct:  314 INADVHAALDDDIIAADIHDKAEKFDEKTEEVFKALQVFTACCDAFGHGANDVANSIGPYAAIYIIYTDNAVVSSRDLGADAYWILFLGGLGIVLGLATYGYKIMAAIGVQISRITPSRGFCIEMGATVIVVMGSRLEMPLSTTHCQVGATMGVALVERVGGLNWKLLGTVAFGWVATLVVVGFTSAILFCQGAYAPCV 512          
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Match: G9E5G8_9PHYC (Phosphate transporter (Fragment) n=1 Tax=Ostreococcus lucimarinus virus OlV4 TaxID=754063 RepID=G9E5G8_9PHYC)

HSP 1 Score: 244 bits (623), Expect = 1.420e-72
Identity = 117/185 (63.24%), Postives = 149/185 (80.54%), Query Frame = 1
Query:   52 VSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAPYV 606
            V  IHDNAE+FD R E + +Y+Q+ TA CDSF+HGANDVAN++GPFA IY +Y +G+VSK  D+GNDA+WIL+LG  GIVAGL++YGYKI+ A+G K+AK+TPSRG  IELG+A ++I+G+RL  PLSTTHCQVGAT GVAL EG GGVN  +L K + GW++T+VV   T + +FAQGAYAP V
Sbjct:   97 VQAIHDNAEQFDARTEYSMRYLQILTACCDSFAHGANDVANSIGPFAAIYAIYKSGKVSKNADMGNDAYWILSLGATGIVAGLSLYGYKILNALGTKMAKLTPSRGICIELGAAAVIILGSRLGWPLSTTHCQVGATVGVALFEGTGGVNWKLLYKTIAGWLLTLVVVGSTTAFLFAQGAYAPMV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16638.4757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNE7_9PHAE1.140e-13398.14Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNL8_9PHAE1.930e-12794.34Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI2.340e-12491.16Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI1.970e-11383.72Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI2.360e-9774.06Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A7S4F699_CHRCT1.200e-7866.50Phosphate transporter n=5 Tax=Chrysotila carterae ... [more]
A0A7S3YL38_9EUKA4.340e-7563.82Phosphate transporter n=3 Tax=Lotharella globosa T... [more]
A0A7S4BSB8_CHRCT5.610e-7463.45Phosphate transporter n=7 Tax=Chrysotila carterae ... [more]
A0A6S9IV20_HETAK6.560e-7361.31Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]
G9E5G8_9PHYC1.420e-7263.24Phosphate transporter (Fragment) n=1 Tax=Ostreococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16638contigEcto-sp13_S_contig16638:90..3174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score412.9
Seed ortholog evalue9.1e-113
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
Model size1863
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Exons4
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
Cds size648
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462872.9152071-UTR-Ecto-sp13_S_contig16638:89..13041681462872.9152071-UTR-Ecto-sp13_S_contig16638:89..1304Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16638 90..1304 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462872.9289348-CDS-Ecto-sp13_S_contig16638:1304..15021681462872.9289348-CDS-Ecto-sp13_S_contig16638:1304..1502Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16638 1305..1502 -
1681462872.9458327-CDS-Ecto-sp13_S_contig16638:1904..20431681462872.9458327-CDS-Ecto-sp13_S_contig16638:1904..2043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16638 1905..2043 -
1681462872.9567907-CDS-Ecto-sp13_S_contig16638:2324..25151681462872.9567907-CDS-Ecto-sp13_S_contig16638:2324..2515Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16638 2325..2515 -
1681462872.9649282-CDS-Ecto-sp13_S_contig16638:3054..31741681462872.9649282-CDS-Ecto-sp13_S_contig16638:3054..3174Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16638 3055..3174 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16638.4757.1prot_Ecto-sp13_S_contig16638.4757.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16638 1305..3174 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16638.4757.1

>prot_Ecto-sp13_S_contig16638.4757.1 ID=prot_Ecto-sp13_S_contig16638.4757.1|Name=mRNA_Ecto-sp13_S_contig16638.4757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFS
HGANDVANAMGPFAGIYIVYTTGEVSKEGDLGNDAFWILALGGLGIVAGL
AIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQ
VGATTGVALLEGAGGVNGTVLGKAVFGWIITIVVCALTCSVIFAQGAYAP
YVYDTIILPETTSSS*
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mRNA from alignment at Ecto-sp13_S_contig16638:90..3174-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16638.4757.1 ID=mRNA_Ecto-sp13_S_contig16638.4757.1|Name=mRNA_Ecto-sp13_S_contig16638.4757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3085bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16638:90..3174- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCAGATGAACCAGGACATCCACTCGAGCGTCAAGGATTCGGAGTA CGTGAGCCAGATCCACGACAACGCGGAGAAGTTCGACCCCCGGGCGGAGG AGGCCTTCAAGTACGTGCAGGTAAGATATTCGAAGGGATGACGGCTTCTC GCGGAGGAACAACGAAAAATTTCTCCATCGGGGTTGTATCGCTTGAACAG GGTGCACGTGTGAGATTCGAATTCAAGAAATGATTTTTTTATTTCTTGTG GGGGCAGCTGAACGTTGCAAGTCGAACTCATCCACGCGAGACTCTCTTGG CAGTCAAGGGCTCCATGAGGGGATTTCCCCCCCCCTCCATCCCCGATGGT GGGCACGAGTGAGATGCCTTTGTCGAAAATAAACAAATTCACGCACCCAC GAGAGGATTGCGACGTTACGAGACGTGTCGAGTTGATGTCGGCCTTGCAT GTCCTGCTCTTGCTGCACCATCGATTGCACCTTATGGCATTCACCGCCGT GCACCCCAAGGAATTCTATTTTTACCAGATCGTGATGAACATACAGTACA CGATTTTGTGCCACTCGACTTATCTGCTCTACATGCAGACCCGACGCCCC ACCGCACAGCGGCGCCGTCTCACTTGAGACTCACGAACGTTTGCATTCCC CCCCCCCAGGTGTTCACGGCTATCTGCGACTCCTTCTCTCACGGAGCCAA CGACGTCGCCAACGCCATGGGACCCTTCGCCGGCATCTACATCGTCTACA CAACGGGAGAGGTTAGCAAGGAGGGAGACCTCGGAAACGACGCCTTCTGG ATCCTCGCCCTCGGCGGCCTTGGTATCGTTGCCGGGCTTGCCATCTACGG GTAAGCAAGTTTGCCAAGGCGACAAAGCAGACATCAAGTCGTTCGCCATA CCTTGCCGAGCCGTATGCATATGTTAACGTCAAGCTGAAATGAAGCCGTG CCTAAGCCCTTCCTTAAAGGAACGTCGAAAATGAGTAGACCTGTCCAGAA GATACCTAGGACACATGCGGGGATTCTGGTGTGGTGTACTTACCAGGCCC TGCTTTCTCGTGACGTATGACACTCACATTCTCTGACATGGTGCCTCACG CCTTGCCATTTCTACCATCTGACGACGTCAGGTACAAGATCATCGCCGCC ATCGGCGTGAAGATCGCGAAGATCACGCCTTCCCGTGGTTTCGCGATCGA GCTCGGTTCCGCAATGATGGTCATCATCGGCACCCGGCTCGAGATCCCCC TCTCCACCACCCACTGCCAGGTAAGCCAACCAACCTATTGATGTCCCCCC AATAATATGTTTTCATTTTCACTTTGTAAGAAACGTTTGAATTTTATCTT CGTTGTTGGAATCTCAACACACCAAAGCTCTCGTGTCGCGCATGATACAT TAGTATGAAAGCGATTTCGTCTTTCGGTGGATGTTAACTCATGCGCTGTT TCTTAGAATGTTCCTGGCTGGAAAACCATGGGTTCTGCGATGTAATTGCC TTGTGTTGAGTATTGTTTTCGGTTCGGCAAGACTGTCGTTCTTATGCCCG CTGTTACGGTTTTGTTTCTCACGGAAAACATTTTTTCAACTGTGTTCGGC GAAGGTTTTCCTCCTGAAACACCGTTTTTCTCTGTCCTATTCTCAAACCT CTAATGTTTCTGAAACAAACAGGTCGGGGCCACCACCGGTGTCGCCCTCC TCGAGGGAGCCGGCGGCGTGAACGGGACCGTGCTCGGGAAGGCCGTCTTC GGGTGGATCATCACGATCGTCGTGTGCGCTCTTACCTGCTCTGTTATATT CGCGCAGGGAGCCTACGCCCCCTACGTGTACGACACCATCATCCTTCCGG AGACCACCTCGTCCTCGTAAAAAGAAAAAAAGACGACAGGGTGTTTTTTA CAGCAACTGAAGCGGCAACGCCTTTTTGCCGTCGTCACCTGGCTTGTTAG CGCAACCGTGTGCCAGGGGTCAGGCGACGGACGATGAGCGAAGAACACGG TTCAGTTCATTAATTTGTAGAGTTGTGTACCACGTTATTTTGTTTTGAAT ACGAACGCGTTGCTCGGGCCCGCGGCGACGGCAGCAGGGAGTTTTATGGC GTTGCGAATAGGGGTCTATTTTCTTTGGGGCGATGTGTCCGTTGCGCGAG GCCCTTCTTCCGCAACTAGGGACCCAGCCTGTCTACCATGGGGGAAAGAT ATGGTGTACCCTTCCCCACCCCAGGGTGCCCGACGCTCTGGCCCGTGTTT TGTATGTTGGAAGTGATGTTGCACCGATCGAGGCCAATCGGGTGCTAGCT TCCTTGCTTGCCTGCGCGCTGGTTGCGTGGATGTATGTTTTTCATCTTGT AGGAGGAGCGGAACATTTTTACGAGACATCAAAAAGGCTGTGCGACATGG GGAAGACTTTTACCGAACTAGCGTTGGCAGCTACTGCCCGTGGCAGAATA GTGAAACACAGCGGGAGAAATGTTGGAACAGCTTCGAAGTCCGAGACTGC GTGAAGTTTTTCCTCCTACTTCGTAGACCGCTACCACATCTTGTATGTTG GGGACTCCCATCGTTCGGTTGCCACATTCTCCAAATTTTTTGTCTTTCGC ACGTTTTTCGCGCCGGGTCTGTTTGTTTTTGTTGTCTCTTCACGTCATTC AGCTAGCGCTAGGGAATATCGCGTCACTTTTCTCCTGGGGGTGGGTTCGT GGCTGACGTTGCATTGTTTTCGCAGTTGGTGTTTATAATGGACAACATTT TCTTGCCACATCTGTTTCAAGTCTGGGAGAAGACAACTCTTGCAGTGTTT CGCCCCGAAGCGGTTGTGCCGGTTGGTGGCTTCACCCGTGGATTTTCTCG CCACGACTGATGGCAGTCCTCGTTCGTTCGTCTTAGCGAGGAGACTGAAT GAAAATTAACATTGAACGATAATTTTTATTACTCACTCGATGTGCCTTCG CCGACAGCTGTTCCTAAAGTGTTCATGTTGGCCGGCGCAACATTTCTGTT GCTCAACAACAAATGTAGTCCCGCAAAGGCATTCATTTCCCGCCAAACAG TACAACGCGTACGAATGATATTCCTTTCCTTTTTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16638:90..3174-

>mRNA_Ecto-sp13_S_contig16638.4757.1 ID=mRNA_Ecto-sp13_S_contig16638.4757.1|Name=mRNA_Ecto-sp13_S_contig16638.4757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16638:90..3174- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCAGATGAACCAGGACATCCACTCGAGCGTCAAGGATTCGGAGTA
CGTGAGCCAGATCCACGACAACGCGGAGAAGTTCGACCCCCGGGCGGAGG
AGGCCTTCAAGTACGTGCAGGTGTTCACGGCTATCTGCGACTCCTTCTCT
CACGGAGCCAACGACGTCGCCAACGCCATGGGACCCTTCGCCGGCATCTA
CATCGTCTACACAACGGGAGAGGTTAGCAAGGAGGGAGACCTCGGAAACG
ACGCCTTCTGGATCCTCGCCCTCGGCGGCCTTGGTATCGTTGCCGGGCTT
GCCATCTACGGGTACAAGATCATCGCCGCCATCGGCGTGAAGATCGCGAA
GATCACGCCTTCCCGTGGTTTCGCGATCGAGCTCGGTTCCGCAATGATGG
TCATCATCGGCACCCGGCTCGAGATCCCCCTCTCCACCACCCACTGCCAG
GTCGGGGCCACCACCGGTGTCGCCCTCCTCGAGGGAGCCGGCGGCGTGAA
CGGGACCGTGCTCGGGAAGGCCGTCTTCGGGTGGATCATCACGATCGTCG
TGTGCGCTCTTACCTGCTCTGTTATATTCGCGCAGGGAGCCTACGCCCCC
TACGTGTACGACACCATCATCCTTCCGGAGACCACCTCGTCCTCGTAA
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