mRNA_Ecto-sp13_S_contig16636.4756.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16636.4756.1
Unique NamemRNA_Ecto-sp13_S_contig16636.4756.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: D7G998_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G998_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.670e-67
Identity = 117/131 (89.31%), Postives = 120/131 (91.60%), Query Frame = 1
Query:    1 CILSCFIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAATLKENEAKLARIHKQAEQLIKR 393
            C    F   +  KVCSWNQKRRLLRHLGSFVARYKEAEQKLMKME LSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQT+LENCSVEQEAATLKENE KLARIHKQAEQL+KR
Sbjct:  154 CTFDTFQEMVQEKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEGLSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTKLENCSVEQEAATLKENEVKLARIHKQAEQLMKR 284          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S2D6M9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6M9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.720e-15
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    1 CILSCFIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAATLKENEAKLA 357
            C  + F   +  K  SW Q++ L+  L    A +  AEQK+M+ME L+DEEQE+YD    D ++EK  WL++  KAMVENG++T  E++Q+  Q+  +L   + E+ AA   EN+ K A
Sbjct:   56 CEFATFQKMVQSKTQSWTQRKALMAELQERKAAFDAAEQKMMRMEPLTDEEQELYDLTSGDAIQEKLTWLSAHCKAMVENGEITMGEKQQLREQVGEKL-TAAREELAAAEAENKPKKA 173          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A835ZCH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.470e-15
Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 1
Query:    1 CILSCFIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRL 297
            C    F   ++ K  SW Q++RL R L     R++ AE K+++MEALS EEQ +YDS   D + EK  WLT+ +K M + GQLTA E+ QVL+QI  +L
Sbjct:  130 CEFDTFKEMVAVKTQSWGQRKRLCRALQDMAERFEVAEAKMIRMEALSPEEQVLYDSTSADLLAEKVTWLTAALKRMADEGQLTAREKTQVLAQIDAKL 228          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S2ST43_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST43_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.720e-13
Identity = 38/97 (39.18%), Postives = 65/97 (67.01%), Query Frame = 1
Query:   37 KVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAA 327
            K  SW Q+R+LL  L +   ++++ E K+M ++ L++EEQE+YD    D +++K  WL + +KAMV+ GQLT  E++Q+L Q++ R++  + E E A
Sbjct:  184 KTQSWAQRRQLLAELQAMARQFRDIENKMMLVQPLTEEEQELYDVSSTDALQQKITWLEAELKAMVDQGQLTMGEKQQLLDQVEQRIQTATEELELA 280          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S1T2D8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2D8_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 2.690e-11
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 1
Query:   31 SRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAATLKENEAKLARIHKQAEQLIKR 393
            S K+ ++ Q++ LL  +     +Y+  EQK++ ME+L+DEEQ++YD  D   + EK  W+T  ++ MVE+G LTAAE+  +L Q+ T++E    E E A     + K  ++ +  EQ+  R
Sbjct:   37 SFKITTFAQRKNLLAAMKEAQKKYEACEQKMISMESLTDEEQQLYD--DAQALPEKVAWVTKTLEDMVESGSLTAAEKSDMLEQLGTKVELLDKEIEMAKSNGKDKKAEKLQEGREQVATR 155          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S4BKD7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKD7_CHRCT)

HSP 1 Score: 67.4 bits (163), Expect = 8.830e-11
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   16 FIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAA 327
            F   ++ K  +++Q++R L  L +  AR    E+ L  M+ LSD+EQ  YD++D +G+  K  WL   ++ MV++GQLTA ERE+VLS+++ + E  S++  AA
Sbjct:   74 FKAMIAAKTPTFSQRKRALDALKASKARIASLEEALTAMKPLSDDEQSWYDAVDAEGLGLKISWLAQTLEKMVDDGQLTAKEREEVLSRMEEKAEELSLKLSAA 177          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S4BKC2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKC2_CHRCT)

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-10
Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   16 FIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAA 327
            F   ++ K  +++Q++R L  L +  AR    E+ L  M+ LSD+EQ  YD++D +G+  K  WL   ++ MV++GQLTA ERE+VLS+++ + E  S++  AA
Sbjct:  149 FKAMIAAKTPTFSQRKRALDALKASKARIASLEEALTAMKPLSDDEQSWYDAVDAEGLGLKISWLAQTLEKMVDDGQLTAKEREEVLSRMEEKAEELSLKLSAA 252          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A7S2CP10_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CP10_9DINO)

HSP 1 Score: 59.7 bits (143), Expect = 1.500e-8
Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   16 FIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQE 321
            F   L   V S+ QK+RLL  +   +++ +E E K+ ++EALS EEQ ++D +  D + EK   LT  ++ MV+ GQLTA E+   L Q++ +L   +VE+E
Sbjct:    2 FSRLLGDYVTSYQQKKRLLDTIKGRISKLEEIEAKMTRLEALSPEEQTLFDDVGADVLREKAKSLTGEMQRMVDEGQLTANEKANFLEQLEGKL--AAVEEE 101          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A061RDY0_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RDY0_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 8.070e-8
Identity = 39/116 (33.62%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   31 SRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAATLKENEAKLARIHKQAE 378
            S KV S+ Q++ +L  L +   +Y+  E+K++ MEAL+DEEQ++YD  +   + EK  W T L++ M+E GQLT  E+  +L  + +++E    E   A  ++   +LA++ +  E
Sbjct:  154 SPKVRSFAQRKAMLAALKAEQEKYEACERKMITMEALTDEEQKLYD--EAQALPEKIEWATKLLEEMIEEGQLTVREKSDMLENLGSKVEALDREIAKARGEDKPKRLAKLQEARE 267          
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Match: A0A485LK90_9STRA (Aste57867_22506 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK90_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.830e-7
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 1
Query:   37 KVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDEEQEIYD-SIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLENCSVEQEAATLKENE 345
            K  SW QK+RLL+ L   +A + + E+KLM+ E L   EQ +YD +   D   +K  WL S +K M + G+LT AE+ ++L  ++  L   + E E+A+ K+ +
Sbjct:  162 KARSWLQKKRLLKALQGSMAAFTQLEEKLMRGETLQPVEQMMYDGNAGSDVNADKCAWLQSEIKRMADAGELTKAEKTELLGNLEQNLATLATELESASGKKKD 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16636.4756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G998_ECTSI3.670e-6789.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2D6M9_9STRA1.720e-1540.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZCH2_9STRA3.470e-1545.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2ST43_9STRA1.720e-1339.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1T2D8_9CHLO2.690e-1135.54Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S4BKD7_CHRCT8.830e-1138.46Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BKC2_CHRCT1.400e-1038.46Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2CP10_9DINO1.500e-838.24Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A061RDY0_9CHLO8.070e-833.62Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A485LK90_9STRA2.830e-736.54Aste57867_22506 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16636contigEcto-sp13_S_contig16636:254..3675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score219.2
Seed ortholog evalue1.2e-54
Seed eggNOG ortholog2880.D7G998
Model size396
Hectar predicted targeting categorymitochondrion
Exons4
EggNOG OGs2AYR8@1,2S03Y@2759
Cds size396
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462872.8462884-CDS-Ecto-sp13_S_contig16636:253..3511681462872.8462884-CDS-Ecto-sp13_S_contig16636:253..351Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16636 254..351 +
1681462872.865606-CDS-Ecto-sp13_S_contig16636:1456..15771681462872.865606-CDS-Ecto-sp13_S_contig16636:1456..1577Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16636 1457..1577 +
1681462872.8747606-CDS-Ecto-sp13_S_contig16636:2166..22291681462872.8747606-CDS-Ecto-sp13_S_contig16636:2166..2229Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16636 2167..2229 +
1681462872.8842528-CDS-Ecto-sp13_S_contig16636:3561..36751681462872.8842528-CDS-Ecto-sp13_S_contig16636:3561..3675Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16636 3562..3675 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16636.4756.1prot_Ecto-sp13_S_contig16636.4756.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16636 254..3675 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16636.4756.1

>prot_Ecto-sp13_S_contig16636.4756.1 ID=prot_Ecto-sp13_S_contig16636.4756.1|Name=mRNA_Ecto-sp13_S_contig16636.4756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp
CILSCFIPRLSRKVCSWNQKRRLLRHLGSFVARYKEAEQKLMKMEALSDE
EQEIYDSIDPDGVEEKTVWLTSLVKAMVENGQLTAAEREQVLSQIQTRLE
NCSVEQEAATLKENEAKLARIHKQAEQLIKR*
back to top

mRNA from alignment at Ecto-sp13_S_contig16636:254..3675+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16636.4756.1 ID=mRNA_Ecto-sp13_S_contig16636.4756.1|Name=mRNA_Ecto-sp13_S_contig16636.4756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16636:254..3675+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGTATTCTGTCATGTTTTATCCCACGTCTTTCGCGGAAGGTCTGTTCCTG GAACCAGAAGAGGCGTCTCCTCCGACATCTTGGGTCCTTTGTCGCAAGGT GTGCCATCCAATACATTGGGAGGCGTTTCGTCCCCTGTTCTGCATCATCA TCATCGTGTCTTTCTTCCTGCTTCGATTGCCGGGTCTTTTGCCTCAGGAC GGCGGGGTTATTCATCTCTCTGGTATATGTTTCGCGACCCCCTTTTTGTT GAACAAGATTGACCAATATATCGCCTTTGAAACCATAACAATCGAATCAG AGGTAGGCTATTCATTCGAGATAACATCCCGATCGATGGGATGTGATTGA CCAATATATCGCCTTGGAAACCGTAACAATCGAATCAGAGGTAGGCTGTT CATTCGAGATACCATCCCGATCGATAGGATGTGATTGGCATAGATATCGC CTTTGAAACATTCGAATCAGAGATGGGCCACTCATTCGAGATAACGTCCC GACCAATGGGATGTGTTGAAGTATTTACAATGAGGGTTGAGGGAAATCTA CTGGATGATGATACTGGACTTTGTTTAAGCTGTTTAGGCTTGTGTGAACT GAGAGATGAGTGACACCAGGCCCAACACCTTTTATTGTTTCGCGTGTATT TTCCCCATCTGGCGTGCCCCGATGCTTCCGTTGACAGTGGCATCTTAGCG GCTATGTTCCTGATCTACACCAATCTTGTGCCTGTTTGCTGCCGTCCTTG CGGTGGAACCTGCGCTTTCTTTTTCTGTTCCATCGCCGACACGATGGCCC GTGCCGGACGTCTGGCTGCTTGATGGTACACGGCTCGCGATCACGGTCAC GGCCGTAAAGAGTTCACAAATAGTTATGTGCGGCCACCACCTAAACTTTC ATGCACAACGAGCAAAGTCTTCGTTGAAATGTGTGCTCTCCCCGGGCTTT ATTGAAAAAGGAGTACACAGAGATGGAAATATTTGCGTCGATAACCATGA AAGAAACATTTGCGGCCACGATCTTTTTTGAAAACAGACAGCCAAAGGAA AAACGCACGAAAAATGTGCCACAAAATGCAAAGCCGACACATGCCCTACG CGAACGGCAGTTCTATTTAGCTGTTCCTCGTGCACCAAGTAATTGTTGTT TTGGATTGTTTCTCCGACTTTTCCGACGCCACAACCGGGCGGGCGCTTTC CAGATATAAAGAGGCGGAGCAGAAGCTGATGAAGATGGAAGCTCTTTCGG ACGAGGAACAGGAGATCTACGACAGCATTGACCCGGATGGCGTGGAAGAG AAGACCGTGTGGCTTACTTCTCTGGTAAGGGATGACGATGGTTTGTTGTT GTTGTTATTGTTGTTGTTGTTGCTGCTGCCGCTGTGGTAACGTCCTCTGT TTCACTCTTGTGGGGAAACAGACGGCGGCGTAACTGTGCAACGAAGGTGG GGCTAAGGCCAGACTCGAGCCTTCCGGGTCAGCATTACATCCACAAAAAA CAAAAAAATACTCCGGTAGTGTCGGGTCGGTCTGGTCGCACGCACGCCTG CTTGGTTTTAGAAAATGTTCGAAGCGCACCTCCGGAGTGCCTCATCAGAG CATGTAGCAGCCGTGTCATCAAGAAGGCGTGATACAAGATAAAGAAAGGC ATGTGCTGGCGTGAACCGGCTGGCTGCCGATATCAGTGACGTTTCCGAAG CTCGAACAGCTCACACAGCTTGCGTGTTTTTGACACGAAGAGCCCAGCGA ACCCCAGCGAAGCAAACCGAAAATAACCAAAACCTGTGTTCAGTCGTACA CAGAATGAAAGGTGAAGACCCGTCGCAGATAATACCATAGTCGACGGGGA TGCGTTGAAGTTTTTTTCGTTGTCATGTTTTCCTGTGCGTTGCCTCTTTG GTGCTTTTTACAGGTGAAGGCGATGGTGGAGAACGGACAACTTACCGCGG CCGAGCGTGAGCAAGTCTTATCGCAGGTACACAGGTGCCAAAAGTCCTTT GCCCTATACCTGCCGCTCTTCTTGCCCTCAGTAGTCCTGTGTGCAATAGC TTTTACTCTTCTCGCTGACGTATTCCTGTCCTATGGCGTTCACTCCTCTT GCTGCAGCAAGTCGTGTCGCAGATAGGTGCCTATAGTGCTACTCCTAGCT CCCCATTGGTGGTTGCCGTTATTCGTGTTGCTCCCTCTGCTGTTGTTGAT CCCAGCACACCCGTTGAGATTGTTTTTTGAGCAAGACTTTTTTGTAAGCA CGAGTGATATTCTTCAGCACACCTGTTGGGTAACCTTATCTAAAGTCGTT TTTTTTTTTTTCCTTGGAATGCGGCGTCGTAGACTCTACAGGAGACTAAG AACTTGGAAATTTTGGCGGTCGGAGGATGGCGAACTTGTCGTGATATCTT CCTAGAGAGGCGATAACGCGTTTTTGTTATCGGGGGTTTTGTTGGGTGCC GAGATCCACCTTGAAGCGCTACGAAGACACAATCCGCCAGATATGGCGGG GAGGCAGATGCAAGGTTTCCCCTTGTGAGGAGTGTGATCAACCCTTAAAA GGGCCAGGGGGGCGCCGTGAATACTGGCGCGGAGGTTCGAGCCCCCAAAC CCCTCCGTACCTTGGCACTTGTCTGCATTTTGTTTGTAGGGTGAAGGGTA GTATGCTGGACCCTGAACAGAGCCTGGTGCATGGTATAGTGCCGGTGTTT TCGGCTAGTACACACTGGAACACCAAGTCTTTCTGTACTTTGAATTGTGC CGGTGTCCGATATAGTGTCGGTACTGTATTACAGGCGCTTGTAGCAACGC GTTCGAACCAACCTCATCAAAATCACCGAGTGATACTCTTGCAACCGCTC CGAAGGCCTACATACGCTTGCATTTTGTTGATCTACAACAACCACCATTT TTGTGTTTTTTTTCATGCGTGTTGTGCGCCTGCACGGATTAAGACGAATC CCGAGAAAAATTCCATCGAGGACGTTTCATTGAGTCTACAAGGTTGCATA CTTTTACATACTTATACGACAAACAGTAACTCGATAGGTTCGGTTTTGTT GCATGCGCGCCTTACACTTGGACACATTCAGACGGAGCTCGGAAAACAGT TCCGTATGCTCTACGGCACACCCCTTCTTTTGTCTGCAAGCCATCATCGG TTTCCTTTTGAATTTTTGTTGGTGTGGGTTGCGGTTCGCCTGGACAGATT CAGACGAAACTCGAGCAATTGTTCCACTGGACGCACGGTGTTTTTTTTTT CTTTCAGTCACACTCGATGTGTTCGCCTTTGTTGCGTGCGTCCTTCGCGC CTGGACAGATCCAAACGAGGCTCGAGAACTGCTCCGTTGAGCAAGAAGCG GCCACCCTCAAGGAGAACGAGGCCAAGCTGGCCAGGATACACAAGCAGGC GGAGCAGCTCATAAAGAGGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16636:254..3675+

>mRNA_Ecto-sp13_S_contig16636.4756.1 ID=mRNA_Ecto-sp13_S_contig16636.4756.1|Name=mRNA_Ecto-sp13_S_contig16636.4756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16636:254..3675+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGTATTCTGTCATGTTTTATCCCACGTCTTTCGCGGAAGGTCTGTTCCTG
GAACCAGAAGAGGCGTCTCCTCCGACATCTTGGGTCCTTTGTCGCAAGAT
ATAAAGAGGCGGAGCAGAAGCTGATGAAGATGGAAGCTCTTTCGGACGAG
GAACAGGAGATCTACGACAGCATTGACCCGGATGGCGTGGAAGAGAAGAC
CGTGTGGCTTACTTCTCTGGTGAAGGCGATGGTGGAGAACGGACAACTTA
CCGCGGCCGAGCGTGAGCAAGTCTTATCGCAGATCCAAACGAGGCTCGAG
AACTGCTCCGTTGAGCAAGAAGCGGCCACCCTCAAGGAGAACGAGGCCAA
GCTGGCCAGGATACACAAGCAGGCGGAGCAGCTCATAAAGAGGTAG
back to top