prot_Ecto-sp13_S_contig16632.4754.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16632.4754.1
Unique Nameprot_Ecto-sp13_S_contig16632.4754.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16632.4754.1 vs. uniprot
Match: D8LFN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN7_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 6.380e-13
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    1 MADDVAIGAYLGMIEHAKSFKDVLCSKDMDVILS 34
            MADDVA+GA+LGMIEHAKSFKDVLCSKD DVILS
Sbjct:   33 MADDVALGAHLGMIEHAKSFKDVLCSKDTDVILS 66
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BLAST of mRNA_Ecto-sp13_S_contig16632.4754.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 3.610e-6
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    1 MADDVAIGAYLGMIEHAKSFKDVLCSKDMDVIL 33
            MAD V + A LG+I+HAKSFKDVLCS+D DVIL
Sbjct:   29 MADGVELEACLGIIQHAKSFKDVLCSEDTDVIL 61
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16632.4754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFN7_ECTSI6.380e-1391.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIG7_9PHAE3.610e-672.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16632contigEcto-sp13_S_contig16632:3740..3841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16632.4754.1mRNA_Ecto-sp13_S_contig16632.4754.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16632 3647..3841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16632.4754.1 ID=prot_Ecto-sp13_S_contig16632.4754.1|Name=mRNA_Ecto-sp13_S_contig16632.4754.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MADDVAIGAYLGMIEHAKSFKDVLCSKDMDVILS
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