mRNA_Ecto-sp13_S_contig16629.4752.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: D8LBY9_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY9_ECTSI) HSP 1 Score: 274 bits (701), Expect = 1.850e-87 Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLADHKRDGKLKEA 405
+DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLADHKRDGKLKEA
Sbjct: 446 EDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLADHKRDGKLKEA 580
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A6V1R1E5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R1E5_HETAK) HSP 1 Score: 130 bits (327), Expect = 3.280e-35 Identity = 63/128 (49.22%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLADHKR 384
+DPRVRAW AGC+LA+PCW + +FY ++A L EY+AAECWFG +LQ+ LP NVRGVGQG+F L G LAP MG +++G LQ LL+ V Y +AL F +GE LA+ +R
Sbjct: 100 RDPRVRAWTCAAGCLLALPCWAALCLSPSFYGAMAALFLEYVAAECWFGPVTAVLQDALPANVRGVGQGLFGFLITVGNLAPVAMGLAMERGA-TLQATLLWGVGGLYLAAALLFLRLGEVQLAEQRR 226
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A7S0J9A7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9A7_9EUKA) HSP 1 Score: 121 bits (304), Expect = 4.300e-32 Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESV 366
+ R+ W+P AGC+LA+P W+G + + +SLA L AEY+ AECWFG TV+ LQ P +G+ QG+F+TL+ G LAP L+GYL++ G EL L Y V A YA SAL F G V
Sbjct: 76 SEQRMAQWIPAAGCVLAVPFWLGTMFAGSLELSLAALFAEYLVAECWFGPTVSSLQRAAPAGAQGLAQGLFNTLTLAGNLAPALVGYLLKYGNVELPVALAYIVPALYAASALAFVVAGGPV 197
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: R1D5J9_EMIHU (MFS domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5J9_EMIHU) HSP 1 Score: 108 bits (271), Expect = 3.290e-25 Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 4 DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVL 369
+PR R WVP AG ++A+P W+ ++ +SLA L EY+AAE WFG TV LQ P ++G+ QGVFSTL+ G LAP +G L++ GFEL L V+ Y +A F GE+ L
Sbjct: 347 EPRARQWVPAAGSLVAVPFWLAALSAPTLQLSLAALFLEYLAAESWFGPTVAALQAATPARLQGLSQGVFSTLTLVGNLAPLAIGVLLRDQGFELAPTLGVLVSVLYVAAAAAFVVAGEAGL 468
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A0G4GFP1_VITBC (MFS domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GFP1_VITBC) HSP 1 Score: 103 bits (256), Expect = 5.500e-23 Identity = 53/124 (42.74%), Postives = 70/124 (56.45%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLA 372
KD +RAW+P G LA P W+GV +F +S LL EY+AAECWFG TV ILQ P RG QG+F + P L+G L+ F L+DV+ + VAA Y +S F +G+ + A
Sbjct: 429 KDESIRAWIPAVGSFLAAPLWMGVCLADSFELSAFLLLLEYLAAECWFGPTVAILQSNTPSQYRGTAQGLFQFSNLLSNTLPVLLGSLMTS--FALKDVVAWGVAAAYMVSGGLFVALGQRIKA 550
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A7S3UPA2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPA2_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 6.130e-22 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 4 DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAP 246
PRVRAWVP GC+LA+P W V+ +FY+S+ L EY+ AE WFG + ILQ+ LP NV+G+ QG+F A G AP
Sbjct: 21 SPRVRAWVPAGGCLLAVPLWTISVSVDSFYLSIGILFIEYLCAESWFGPFIAILQDELPLNVQGITQGLFGMAFALGNCAP 101
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A7S4B9C8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9C8_CHRCT) HSP 1 Score: 92.0 bits (227), Expect = 8.180e-21 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFSTLSAFGTLAPPLMGYLIQQGGFELQDVLLYTVAAFYAISALFFFFVGESVLADHK 381
+ P VP+ G +LA+P W+GV+ +F +S+A LL Y+AAECW+G T++ LQ LPP+V G QGV + + G +P L+G L + L+ +L + + + +A+ FF S+ AD K
Sbjct: 45 RQPDRALLVPLCGSMLAVPLWLGVLQARSFSMSMACLLGAYLAAECWWGATMSSLQVALPPSVWGTVQGVVNAVQIVGNGSPLLIGTLARAQVGSLRTLLSFVIPSAHAVCVALFFCAKRSLKADAK 171
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Match: A0A835ZCI8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.140e-13 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 KDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQ 168
+DPR RAWVPMAG +LA+P W+G V +F +++ L +Y+ AECWFG TV +LQ
Sbjct: 440 RDPRFRAWVPMAGSLLAVPMWVGTVNCGDFGLAMTCLFLKYVLAECWFGPTVAVLQ 495 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16629.4752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16629.4752.1 >prot_Ecto-sp13_S_contig16629.4752.1 ID=prot_Ecto-sp13_S_contig16629.4752.1|Name=mRNA_Ecto-sp13_S_contig16629.4752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp MAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPback to top mRNA from alignment at Ecto-sp13_S_contig16629:308..1258+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16629.4752.1 ID=mRNA_Ecto-sp13_S_contig16629.4752.1|Name=mRNA_Ecto-sp13_S_contig16629.4752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16629:308..1258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16629:308..1258+ >mRNA_Ecto-sp13_S_contig16629.4752.1 ID=mRNA_Ecto-sp13_S_contig16629.4752.1|Name=mRNA_Ecto-sp13_S_contig16629.4752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16629:308..1258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |