mRNA_Ecto-sp13_S_contig16628.4751.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16628.4751.1
Unique NamemRNA_Ecto-sp13_S_contig16628.4751.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: D8LKE0_ECTSI (Thioredoxin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE0_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 1.380e-142
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFLHS 630
            QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKS+IIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSS+IMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDA ELLPCSGAFLAIGHKPMTKFLHS
Sbjct:  109 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSIIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSRIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAVELLPCSGAFLAIGHKPMTKFLHS 318
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A822X8T3_9ARCH (Thioredoxin-disulfide reductase n=17 Tax=Archaea TaxID=2157 RepID=A0A822X8T3_9ARCH)

HSP 1 Score: 274 bits (701), Expect = 1.570e-89
Identity = 133/208 (63.94%), Postives = 169/208 (81.25%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSD+ENFPGY + + GP++M DLR QAERFG E++ ++V  VD S RPF++ V   EF A+++II TGAEAIWLGAEGE++ KGRG+STCATCDGAF+ G EV+VVGGGDSAMEEA FLT+FA KVTIVHRRD FR+SK+MLER K++PKI +K HR VK+W+S+   L+GA LED R   + E + C+GAF+AIGH+P+T+FL
Sbjct:   42 QLMLTSDIENFPGYPKGIGGPEMMIDLRSQAERFGLEVIDKNVEKVDFSSRPFKIWVEGEEFRAETVIICTGAEAIWLGAEGEQEQKGRGISTCATCDGAFFRGDEVIVVGGGDSAMEEATFLTRFAEKVTIVHRRDVFRASKVMLERAKNHPKIEIKTHRQVKEWLSDDKGLTGAVLEDSR-DGSLEEIECAGAFIAIGHRPITEFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A2E0PQV3_9EURY (Thioredoxin-disulfide reductase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0PQV3_9EURY)

HSP 1 Score: 273 bits (697), Expect = 6.350e-89
Identity = 134/208 (64.42%), Postives = 166/208 (79.81%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSDVENFPGY + + GP++M D+R+QAERFG E+  ++V  VDLS+RPF V V   E+ A+SLII TGAEAIWLGA+GE++ KGRG+STCATCDGAF++ +E++VVGGGDSAMEEA FLT+FASKVTI+HRRD FR+SK+M ER  D+PKI +K HR VK WV+    L GA LEDPR     E + C+GAF+AIGHKP+T FL
Sbjct:   42 QLMLTSDVENFPGYPKGIGGPEMMIDMREQAERFGLEIQDKNVERVDLSKRPFTVWVEGEEYRAQSLIICTGAEAIWLGADGEDEQKGRGISTCATCDGAFFKDEEIIVVGGGDSAMEEATFLTRFASKVTIIHRRDVFRASKVMYERAADHPKIEIKTHRQVKSWVAGENGLEGAILEDPR-DGKIEEITCTGAFIAIGHKPITAFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A6V8DS78_9ARCH (Thioredoxin-disulfide reductase n=6 Tax=Archaea TaxID=2157 RepID=A0A6V8DS78_9ARCH)

HSP 1 Score: 272 bits (696), Expect = 9.000e-89
Identity = 134/210 (63.81%), Postives = 167/210 (79.52%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFLHS 630
            QL LTSD+ENFPGY E + GP++M  LR+QAERFG E+  ++V  VDLS  P++V V   E+ +KS+II TGAE+IWLG EGE+  KGRG+STCATCDGAF+  +EV+VVGGGDSAMEEA FLT+FASKVTIVHRRD FR+SK+M ER  ++PKI +K HRTVK W+S+   L+GA LEDPR   + E + CSGAF+AIGHKP+TKFL +
Sbjct:   42 QLMLTSDIENFPGYPEGIGGPEMMMQLREQAERFGLEVHDKNVERVDLSEIPYKVWVEGVEYRSKSIIICTGAESIWLGVEGEDAQKGRGISTCATCDGAFFRDEEVIVVGGGDSAMEEATFLTRFASKVTIVHRRDVFRASKVMYERAVNHPKIEIKTHRTVKSWLSDDNGLTGAVLEDPR-DGSTETMNCSGAFIAIGHKPITKFLEN 250
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A327GYD5_9EURY (Thioredoxin-disulfide reductase n=3 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A327GYD5_9EURY)

HSP 1 Score: 272 bits (696), Expect = 9.000e-89
Identity = 133/208 (63.94%), Postives = 170/208 (81.73%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSDVENFPGY + + GP++M D+R+QAERFG E+  ++V  VD+S+RPFRV V  +EF A+SLII TGAEAIWLGA+GEE  KGRG+STCATCDGAF+  +E++VVGGGDSAMEEA FLT+FASKVTI+HRR+ F++SK+M ER  ++PKI +K  R V++WV++   LSGA LEDPR   + EL+ C+GAF+AIGHKP+T FL
Sbjct:   42 QLMLTSDVENFPGYPQGIGGPEMMVDMREQAERFGLEVQDKNVERVDVSKRPFRVWVEGQEFSAESLIICTGAEAIWLGAKGEEGQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEATFLTRFASKVTIIHRREVFKASKVMYERALNHPKIEIKTFRQVREWVADDSGLSGALLEDPR-DGSEELINCTGAFIAIGHKPITGFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A2A5VFF7_9ARCH (Thioredoxin-disulfide reductase n=1 Tax=Marine Group II euryarchaeote MED-G36 TaxID=2007297 RepID=A0A2A5VFF7_9ARCH)

HSP 1 Score: 272 bits (695), Expect = 1.280e-88
Identity = 133/210 (63.33%), Postives = 168/210 (80.00%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFLHS 630
            QL LTSD+ENFPGY + + GP++M  LR+QAERFG ++  ++V  VDLS RPF+V V   EF A+SLII+TGAE+IWLG EGEE  KGRG+STCATCDGAF+  +E++V+GGGDSAMEEA FLT+FASKVTI+HRRD FRSSK+M ER  ++PKI +K  R+VKKW+S+   L+GA LEDPR   + E + C+GAF+AIGHKP+T FL S
Sbjct:   42 QLMLTSDIENFPGYPQGIGGPEMMMQLREQAERFGLQVEDKNVERVDLSSRPFKVWVEGEEFQAQSLIISTGAESIWLGVEGEEAQKGRGISTCATCDGAFFRDEEIIVIGGGDSAMEEATFLTRFASKVTIIHRRDVFRSSKVMYERAANHPKIEIKTFRSVKKWLSDDNGLTGAVLEDPR-DGSIEEISCTGAFIAIGHKPITGFLES 250
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A075FW64_9EURY (Thioredoxin reductase (TrxB) n=13 Tax=Archaea TaxID=2157 RepID=A0A075FW64_9EURY)

HSP 1 Score: 272 bits (695), Expect = 1.320e-88
Identity = 133/208 (63.94%), Postives = 164/208 (78.85%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSDVENFPGY E + GP++M DLR QAERFG E+  R+V SVD S RPF+V     EFFA ++II TGAEAIWLG EGE+  KGRG+STCATCDGAF+  +E++VVGGGDSAMEEA FLT+FASKVT+VHRRD FR+SK+M ER  ++PKI ++  R VKKW+S+   L+GA L DPR  D+   + C+GAF+AIGHKP+T+FL
Sbjct:   42 QLMLTSDVENFPGYPEGIGGPEMMLDLRAQAERFGLEVQDRNVGSVDFSSRPFKVETEGEEFFANAIIICTGAEAIWLGVEGEDAQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEATFLTRFASKVTLVHRRDVFRASKVMYERAVNHPKIEIQTFRQVKKWLSDENGLTGAVLTDPR-DDSEHEIACTGAFIAIGHKPITQFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A3A5V6W3_9ARCH (Thioredoxin-disulfide reductase n=12 Tax=Archaea TaxID=2157 RepID=A0A3A5V6W3_9ARCH)

HSP 1 Score: 270 bits (691), Expect = 5.160e-88
Identity = 132/208 (63.46%), Postives = 167/208 (80.29%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSDVENFPGY + + GP++M ++R+QAERFG E+  ++V  VDLS+RPF V V   EF A+SLII TGAEAIWLGAEGEE+ KGRG+STCATCDGAF+  +E++VVGGGDSAMEEA+FLT+FASKVT++HRR+ F++SK+M ER  ++PKI +K  R VKKW++    L GA LEDPR   + E + CSGAF+AIGHKP+T FL
Sbjct:   42 QLMLTSDVENFPGYPKGIGGPEMMVEMREQAERFGLEVQDKNVERVDLSQRPFSVWVEGEEFKAESLIICTGAEAIWLGAEGEEEQKGRGISTCATCDGAFFRDEEIIVVGGGDSAMEEAIFLTRFASKVTVIHRREVFKASKVMYERAAEHPKIEIKTFRQVKKWIAGDQGLIGAVLEDPR-DGSEEEISCSGAFIAIGHKPITSFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A367I5M4_9ARCH (Thioredoxin-disulfide reductase n=18 Tax=cellular organisms TaxID=131567 RepID=A0A367I5M4_9ARCH)

HSP 1 Score: 269 bits (687), Expect = 2.080e-87
Identity = 131/208 (62.98%), Postives = 166/208 (79.81%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSD+ENFPGY E + GP++M  LR+QAE+FG E+  ++V  VD S +PF+V V   EF +KS+II TGAE+IWLGAEGEE+ KGRG+STCATCDGAF+  +EV+V+GGGDSAMEEA FLT+FASKVT++HRRD FR+SK+M ER  +NPKI +K  RTV+ W+S+   LSGA LEDPR   + E + C+GAF+AIGHKP+T FL
Sbjct:   42 QLMLTSDIENFPGYPEGIGGPEMMIQLREQAEKFGLEVQDKNVERVDFSEKPFKVWVEGEEFRSKSVIICTGAESIWLGAEGEEEQKGRGISTCATCDGAFFREQEVLVIGGGDSAMEEATFLTRFASKVTLLHRRDVFRASKVMYERALNNPKIEIKTFRTVRSWLSDETGLSGAVLEDPR-DGSTEEISCTGAFIAIGHKPITNFL 248
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Match: A0A327GZF4_9EURY (Thioredoxin-disulfide reductase n=3 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A327GZF4_9EURY)

HSP 1 Score: 268 bits (686), Expect = 2.860e-87
Identity = 129/208 (62.02%), Postives = 167/208 (80.29%), Query Frame = 1 
Query:    1 QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSRRPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGAFYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVKDNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIGHKPMTKFL 624
            QL LTSD+ENFPGY + + GP++M +LR QAERFG ++  ++V  VDL  RPF+V V  +EF A+SLII TGAEA WLG EGEE+ KGRG+STCATCDGAF++ +EV+V+GGGDSAMEEA FLT+FA KVTI+HRRD F++SK+MLER K +PKI ++ HR V KW+S+   L+GA +EDPR   + E + C+GAF+AIGHKP+T+FL
Sbjct:   41 QLMLTSDIENFPGYPQGIGGPEMMLELRTQAERFGLKVQDKNVEKVDLGSRPFKVWVEGQEFNAESLIICTGAEATWLGVEGEEEQKGRGISTCATCDGAFFKNEEVIVIGGGDSAMEEATFLTRFAEKVTIIHRRDVFKASKVMLERAKAHPKIEIRTHRQVTKWLSDEKGLTGALIEDPR-DGSTEEIACTGAFIAIGHKPITEFL 247
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16628.4751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE0_ECTSI1.380e-14298.57Thioredoxin reductase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A822X8T3_9ARCH1.570e-8963.94Thioredoxin-disulfide reductase n=17 Tax=Archaea T... [more]
A0A2E0PQV3_9EURY6.350e-8964.42Thioredoxin-disulfide reductase n=1 Tax=Euryarchae... [more]
A0A6V8DS78_9ARCH9.000e-8963.81Thioredoxin-disulfide reductase n=6 Tax=Archaea Ta... [more]
A0A327GYD5_9EURY9.000e-8963.94Thioredoxin-disulfide reductase n=3 Tax=Euryarchae... [more]
A0A2A5VFF7_9ARCH1.280e-8863.33Thioredoxin-disulfide reductase n=1 Tax=Marine Gro... [more]
A0A075FW64_9EURY1.320e-8863.94Thioredoxin reductase (TrxB) n=13 Tax=Archaea TaxI... [more]
A0A3A5V6W3_9ARCH5.160e-8863.46Thioredoxin-disulfide reductase n=12 Tax=Archaea T... [more]
A0A367I5M4_9ARCH2.080e-8762.98Thioredoxin-disulfide reductase n=18 Tax=cellular ... [more]
A0A327GZF4_9EURY2.860e-8762.02Thioredoxin-disulfide reductase n=3 Tax=Euryarchae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16628contigEcto-sp13_S_contig16628:539..3865 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score416.0
Seed ortholog evalue1e-113
Seed eggNOG ortholog2880.D8LKE0
Model size630
KEGG rclassRC00013,RC02518,RC02873
KEGG koko:K00384
KEGG ReactionR02016,R03596,R09372
KEGG Pathwayko00450,map00450
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.thioredoxin-disulfide reductase activity
EggNOG OGsCOG0492@1,KOG0404@2759
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Ec32 orthologEc-16_002640.1
EC1.8.1.9
Cds size630
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16628.4751.1prot_Ecto-sp13_S_contig16628.4751.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16628 539..3865 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462872.542994-CDS-Ecto-sp13_S_contig16628:538..6341681462872.542994-CDS-Ecto-sp13_S_contig16628:538..634Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 539..634 +
1681462872.5644739-CDS-Ecto-sp13_S_contig16628:950..10481681462872.5644739-CDS-Ecto-sp13_S_contig16628:950..1048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 951..1048 +
1681462872.5756729-CDS-Ecto-sp13_S_contig16628:1513..16371681462872.5756729-CDS-Ecto-sp13_S_contig16628:1513..1637Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 1514..1637 +
1681462872.584147-CDS-Ecto-sp13_S_contig16628:2138..22071681462872.584147-CDS-Ecto-sp13_S_contig16628:2138..2207Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 2139..2207 +
1681462872.5922546-CDS-Ecto-sp13_S_contig16628:2734..28411681462872.5922546-CDS-Ecto-sp13_S_contig16628:2734..2841Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 2735..2841 +
1681462872.6009927-CDS-Ecto-sp13_S_contig16628:3729..38651681462872.6009927-CDS-Ecto-sp13_S_contig16628:3729..3865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16628 3730..3865 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16628.4751.1

>prot_Ecto-sp13_S_contig16628.4751.1 ID=prot_Ecto-sp13_S_contig16628.4751.1|Name=mRNA_Ecto-sp13_S_contig16628.4751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
QLQLTSDVENFPGYAEAVSGPDLMEDLRKQAERFGTEMMYRDVTSVDLSR
RPFRVSVRKREFFAKSLIIATGAEAIWLGAEGEEQVKGRGVSTCATCDGA
FYEGKEVVVVGGGDSAMEEALFLTKFASKVTIVHRRDGFRSSKIMLERVK
DNPKIHLKLHRTVKKWVSEGGDLSGAELEDPRGQDAAELLPCSGAFLAIG
HKPMTKFLHS
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mRNA from alignment at Ecto-sp13_S_contig16628:539..3865+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16628.4751.1 ID=mRNA_Ecto-sp13_S_contig16628.4751.1|Name=mRNA_Ecto-sp13_S_contig16628.4751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16628:539..3865+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCTCCAGCTGACGTCAGACGTGGAGAACTTCCCGGGGTACGCAGAGGC
CGTGTCTGGCCCCGATCTCATGGAAGATCTCCGAAAACAGGCAGAGGTGA
TCGGCTACGTGGGGACGCTTTTGCTCACGCACACTCCAGGGAAGGGGGAA
GGGGGTGACGCAAAATCGCAGCGAGATGCCGACCGACCTTGCACGTAGCG
CTGTTCCGCGTTTCCTCTCTCTCAAAAATTTAAGCACAACACGCGTGGTT
CCTTCCGGTTCCTCGATGGTGTCTGGCTCTTCTCTCTGTTTCTGTCTCTC
TAGTCCCTCTTTCTCTATGTCCCTCTAATCTCTCTCTCTCTCTCTCTTCT
CTCTCGTTCTCTCTCCGCCGCTCTCTGTTGCCTGTTTCTCAACAACTTGC
TCCCAACCATAGCGCTTCGGCACGGAAATGATGTACAGAGACGTGACCTC
GGTGGATCTGTCCCGCAGACCCTTCAGGGTATCGGTTCGGAAGCGGGAAT
TCTTCGCCAAGTAAGGCGGGTCCTCCCTTTCGCTGTTGCCCTTGTCGCGG
TCGTAGTCGTGGTTGTCGTTGTTGCTGCTGCTGCTGCTGCTACTGCTGCT
GCTGTTGCTGCTGTTGTGCTGTTGTTGCTGATGCTGCGGTGATGCAACAC
TAACGCTTGACTGTCCTGTGTTCCATGTTCGGTACCCTCCAATTTTCCAA
CAAAAGCCAAGACTATCCCGGTGAGACTGGTTTCGGGCGCCTCAAAAGGA
GTTTACAAACCACAGCGGTGGAACAGCCAACACTAAGAACATGAAGACGC
CAGAAAATTCCCCCGTCCTCCCAAACTAGGACAAAGAAGGTCGACGCCGC
GGTTACGCGATGATTTGAACCAATCAGAGGGTTGCTGCCACCATCAGAGA
ATAGGCGAGGAAGCGTAGAGGGGGCGATGTGCGAATTAAGAGCTCCTACG
TGTTGTATGTATGTGGATGCATCAGATCGCTCATCATTGCCACCGGAGCG
GAGGCGATCTGGCTTGGGGCTGAGGGGGAGGAGCAGGTTAAGGGGAGGGG
CGTCAGCACGTGCGCCACGTGTGATGGCGCCTTCTACGAAGGCAAAGAGG
TCAGTGTCCTCTCCCCCCTCCCCCTAATCACCTCTCACCCCCTCTCTCTC
TCACACACACACACACTCTCTCTCTCTCGCTGTCTGAATTACCACTGTTT
CCGTGTCTCGATCACTCCCCGTCCTCTTTCCGCCCCCCGGTGTGTGTGTT
GTGTGGTTCCTCAACGCTCTGTCCGTTGTCTCTTTGCCTCTTCCGGTTGC
CAACATCAACATTATCATGCGTCGTGTTTCTCCTAGCCTTCGTCGAGCCG
ACAATACCAACTCTCCCGCATTTCCACAATTTCACACGGTTTGTTGTGCT
TTCCGTGTCGCGTGTGCTCGCCGCCTGCCACCACCCCCCTCGTCACGTTA
TCCCTTGTTGTGTTTTCAACTTCGAATAGTCAAGAATAACGCTTCGCTGC
TCACATGAAATTGTTTTTTTTTTCTCCACATGTGCTTTGATGCACGACTT
AAACCGGTCGTACCCATGCTTTCGCTTTATTCGTTTCGTCGAAAATACAG
GTTGTGGTTGTAGGCGGGGGCGATAGCGCGATGGAAGAAGCTCTGTTCTT
GACTAAGTTCGCCTCGAAGGTTTGTTGTGAAAGAAACCCTCCCTCGTTTT
TTTTCTTCTGTTTTTTCTTGTCTATTTGTGCGTGTGCGTGCCGCCGAGCG
GAGGGGATGCAACAGACAAAGCTTGTCTATTGTCGCTAGCCACGGCTAAG
CCGGCATGCTCCTGTTGTATCAGTTTGTCCAGATTCACGAGCACGTGCGG
TATTTCCTAGAACGCTTTTTTTTTTTGTCCCTGTAGGATGTTCTGGATGA
CACAAGGAGCGAGCGTGTCAAGTCAATCAATCAAACCCCCTTCATATTTT
TTCTCCGTGGCCGCTTCGACTATGACTTAGAAGCTTGTCCGTTAATTGTA
TACATGCTTGTACAAGGACCCCGTAGGTCAGTGCCCACTTACCGAATTCT
GCGGGTTCTGTGTTTTTTTTCCGGTCTTGGGTGCAACACGAGGCCAGGGG
ACGGTCATCTAAAATTCCATCAACAATGACACAACAACATCCGCCGACAG
CAATCCACACACACCCCCGCCCCATCCCCGCCCACGGTTCCGCTAGGTAA
CCATTGTGCACCGAAGGGACGGCTTTCGGTCGAGTAAGATCATGCTGGAG
CGAGTGAAGGACAACCCCAAGATTCATCTCAAGCTGCATCGTACGGTTAA
GAAGTAAGACGCACTTGCTGTGTTGTTTGCTGTTTGTCTTGTGCTTTTGT
TTGTTCCTGCTGTTGTTTTGTTGTTGATGTTGGTTTTTACGATCGTTTTT
GTATTGTTCATTGTTGTAGCTGTTGTTCTTTATCGTTGCTGTTGTTGTTG
TTGTGATTGTTGGGGGGGGGGGGTTGCAGCCGCTGTCAACGGTTGTTTTG
AAATGTGTTAACTGCGTGCGCGCTATCTCTGGCGTCGCGTTTGCGTATCG
GAAACGGTCTCCCCCACTACAAGGCCGTACAGCCACGAAACAACCTCAGC
GCGGCACAAAAATGTGGTTGTAAAGATAGCAGTGTCGGGGTACCTAAATT
TGTCGCGGCACCTAGTCTTCCTTAGCGACATGGCGACCTCATACCACACC
AAGTGTGTCCCCGCCCGCTCTGCTGAGTACGTTGTAAAAACTTGGACCTT
GTGCGCTATCTCGCGACTGTTCGGGTGGTTCGCGGATAAAGCACTGTCCC
ACCCCGCAAGACCTTGTCTGCACCATGCCATGTTTGTGTCTTGTGTTATC
GCCTTCGTGTGTGTATATGTTCGGTTTGAATGTTCTCAGACGCAAATGGT
GTGGGTGGGGTATTGTCCGTTTGTTGTTTTGATTGCAAAATCTCGAGGGC
TTTTCGTTCTCCTGTGTAACTCTTAAGCACCAACCTGTCTTGGGCTAGGA
GACAGAGACACAGACACACGCAGAAAGAGAGAGAGTGAGAGAGAGACGGG
GTCCGGGGGAATAGAGAAAGAGAAGAGGGGGAGGGAGACAGACAGACAGA
CTGGTAAGACTGAAAGAGCGACATAGACAGAGAGAGACGTGAGATTCCTC
GCCCTGACTGTTTTATATCCCGATGTTGTTACATGTCGCAGGTGGGTTTC
TGAAGGAGGCGATCTCTCCGGAGCCGAGCTAGAAGACCCGCGAGGGCAAG
ACGCGGCGGAACTCCTGCCGTGCAGCGGGGCGTTCCTAGCCATAGGCCAC
AAGCCGATGACAAAGTTTTTACACAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16628:539..3865+

>mRNA_Ecto-sp13_S_contig16628.4751.1 ID=mRNA_Ecto-sp13_S_contig16628.4751.1|Name=mRNA_Ecto-sp13_S_contig16628.4751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16628:539..3865+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCTCCAGCTGACGTCAGACGTGGAGAACTTCCCGGGGTACGCAGAGGC
CGTGTCTGGCCCCGATCTCATGGAAGATCTCCGAAAACAGGCAGAGCGCT
TCGGCACGGAAATGATGTACAGAGACGTGACCTCGGTGGATCTGTCCCGC
AGACCCTTCAGGGTATCGGTTCGGAAGCGGGAATTCTTCGCCAAATCGCT
CATCATTGCCACCGGAGCGGAGGCGATCTGGCTTGGGGCTGAGGGGGAGG
AGCAGGTTAAGGGGAGGGGCGTCAGCACGTGCGCCACGTGTGATGGCGCC
TTCTACGAAGGCAAAGAGGTTGTGGTTGTAGGCGGGGGCGATAGCGCGAT
GGAAGAAGCTCTGTTCTTGACTAAGTTCGCCTCGAAGGTAACCATTGTGC
ACCGAAGGGACGGCTTTCGGTCGAGTAAGATCATGCTGGAGCGAGTGAAG
GACAACCCCAAGATTCATCTCAAGCTGCATCGTACGGTTAAGAAGTGGGT
TTCTGAAGGAGGCGATCTCTCCGGAGCCGAGCTAGAAGACCCGCGAGGGC
AAGACGCGGCGGAACTCCTGCCGTGCAGCGGGGCGTTCCTAGCCATAGGC
CACAAGCCGATGACAAAGTTTTTACACAGC
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