prot_Ecto-sp13_S_contig16622.4747.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16622.4747.1
Unique Nameprot_Ecto-sp13_S_contig16622.4747.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length164
Homology
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A6C0DUT3_9ZZZZ (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DUT3_9ZZZZ)

HSP 1 Score: 101 bits (251), Expect = 8.250e-22
Identity = 60/160 (37.50%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIP--DDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLDAN 158
            +QKL+  E +L R  M +GS     ++   F +  + + +K  V  +PG L +  E L NA D V+   +P     V T K+  D    +I ++ NG+G+PV L + H +Y+ EL+FGH+ + S+Y+DN  R   GLNGLG+KLT+I SK+  IE +D++
Sbjct:   10 YQKLSQREHVLVRSGMYIGSIAKTNEEQWVFDVTQNKMIKKF-VEFSPGFLKIFDEVLTNATDHVTR--DP----TVTTIKIDYDKKTGEISIWNNGSGVPVVLHKEHNLYVPELIFGHLLSGSNYDDNQQRTGAGLNGLGVKLTSIFSKSFTIETIDSD 162          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A427BA93_ENSVE (HATPase_c domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427BA93_ENSVE)

HSP 1 Score: 95.1 bits (235), Expect = 2.210e-21
Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GS        +  E+  +  +  V   PGL  +  E L+NAAD      +P ++      KV IDV+ ++I ++ NG G+PVE+ +  GVY+ EL+FGH+   S+Y+DN+ +   G NG G KLTNI S    IE  D
Sbjct:   34 YQKKTQLEHILLRPDTYIGSVEKHAQTLWVYENGEMVHRP-VTYVPGLYKIFDEILVNAADNKQR--DPSMD----AVKVEIDVNANRISIYNNGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 182          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A2I0B5J6_9ASPA (DNA topoisomerase 2 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B5J6_9ASPA)

HSP 1 Score: 99.8 bits (247), Expect = 2.890e-21
Identity = 62/156 (39.74%), Postives = 84/156 (53.85%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    VGS      L +  ED G+  +A V   PGL  +  E L+NAAD      +P ++    + KV ID  G+ I V+ NG G+PVE+ +  GVY+ E++FGH+   S+Y+DN  +   G NG G KL NI S    IE  D
Sbjct:   37 YQKKTQLEHILLRPDTYVGSVEKHTQLLWVFEDDGMVHRA-VSYVPGLYKIFDEILVNAADNKQR--DPSMD----SIKVEIDAEGNCISVYNNGDGVPVEIHQEEGVYVPEMIFGHLLTSSNYDDNAKKTTGGRNGYGAKLANIFSTEFTIETAD 185          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A1E5VIM9_9POAL (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VIM9_9POAL)

HSP 1 Score: 95.9 bits (237), Expect = 7.520e-21
Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GS        +  E   +  +A V   PGL  +  E L+NAAD      +P ++    + +V IDV GS I V+ NG GIPVE+ +  GVY+ E++FGH+   S+YNDN  +   G NG G KLTNI S    IE  D
Sbjct:   27 YQKKTQLEHILLRPDTYIGSVEKHTQTLWVYEGGAMVNRA-VTYVPGLYKIFDEILVNAADNKQR--DPRMD----SLRVEIDVEGSCISVYNNGDGIPVEVHQEEGVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETAD 175          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A397HFF7_9GLOM (DNA topoisomerase 2 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HFF7_9GLOM)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-20
Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIE-DSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GST       +T + DS   +   V + PGL  +  E L+NAAD  + + +P ++    T KV ID   + I ++ NG GIP+++ +  G+Y+ EL+FGH+   S+Y+DN  ++  G NG G KLTNI SK   +E  D
Sbjct:  115 YQKKTQLEHILLRPDTYIGSTESITEKLWTYDSDSDTMQFGEVDIVPGLYKIVDEILVNAAD--NKIRDPSMD----TLKVTIDKEQNLISIYNNGKGIPIKIHKEEGIYVPELIFGHLLTSSNYDDNEKKVTGGRNGYGAKLTNIFSKKFIVETAD 265          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A2V0P049_9CHLO (DNA topoisomerase 2 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P049_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 1.870e-20
Identity = 61/156 (39.10%), Postives = 88/156 (56.41%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GST       +  + +G+  + ++  APGL  +  E L+NAAD  + V +P ++    T +V ID S + I V+ NG GIPVE+ +  GVY+ EL+FGH+   S+YND   ++  G NG G KL NI S   C+E  D
Sbjct:   61 YQKKTQLEHILLRPDTYIGSTEKQQQQLWVHDGTGMAYR-QITYAPGLFKIFDEILVNAAD--NKVRDPSMD----TVRVDIDQSTNTIRVYNNGLGIPVEVHKEEGVYVPELIFGHLLTSSNYNDKDAKVTGGRNGYGAKLANIFSTHFCVETAD 209          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: B6AEK2_CRYMR (DNA topoisomerase 2 n=2 Tax=Cryptosporidium TaxID=5806 RepID=B6AEK2_CRYMR)

HSP 1 Score: 96.7 bits (239), Expect = 3.470e-20
Identity = 61/160 (38.12%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGST-IPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLDANA 159
            +QK T  E IL R    +GS    + SL    E +       +   PGL  +  E L+NAAD  +       N      KV I  S  +I +F +G GIPVE+ + +GVY+ EL+FGH+    +Y+DN DR+  G NG G KLTNI S   C+E  D+N+
Sbjct:   29 YQKKTQIEHILLRPDTYIGSIEYHEQSLWVWDEINNKMVYKLINYVPGLYKIFDEILVNAADVKAREISMINNERCTCIKVDISKSNKRISIFNDGDGIPVEIHKEYGVYVPELIFGHLLTSDNYDDNEDRVTGGRNGFGAKLTNIFSTEFCVECADSNS 188          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A1D6Q7U3_MAIZE (DNA topoisomerase 2 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6Q7U3_MAIZE)

HSP 1 Score: 96.3 bits (238), Expect = 3.860e-20
Identity = 61/156 (39.10%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GS        +  ED  +  ++ V   PGL  +  E L+NAAD      +P ++      +V IDV G  I V+ NG GIPVE+ +  GVY+ E++FGH+   S+YNDN  +   G NG G KLTNI S    IE  D
Sbjct:   26 YQKKTQLEHILLRPDTYIGSVEKHTQTLWVYEDGAMVNRS-VTYVPGLYKIFDEILVNAADNKQR--DPKMD----ALRVEIDVDGCSISVYNNGDGIPVEVHQEEGVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETAD 174          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: A0A3L6F299_MAIZE (DNA topoisomerase 2 n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6F299_MAIZE)

HSP 1 Score: 96.3 bits (238), Expect = 4.460e-20
Identity = 61/156 (39.10%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLD 156
            +QK T  E IL R    +GS        +  ED  +  ++ V   PGL  +  E L+NAAD      +P ++      +V IDV G  I V+ NG GIPVE+ +  GVY+ E++FGH+   S+YNDN  +   G NG G KLTNI S    IE  D
Sbjct:   26 YQKKTQLEHILLRPDTYIGSVEKHTQTLWVYEDGAMVNRS-VTYVPGLYKIFDEILVNAADNKQR--DPKMD----ALRVEIDVDGCSISVYNNGDGIPVEVHQEEGVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETAD 174          
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Match: R1C6H3_EMIHU (DNA topoisomerase 2 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C6H3_EMIHU)

HSP 1 Score: 96.3 bits (238), Expect = 4.670e-20
Identity = 60/168 (35.71%), Postives = 87/168 (51.79%), Query Frame = 0
Query:    1 FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLA-------PGLLNVTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPVELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTLCIEPLDANAGQ 161
            +QKLT  E ILQR    VGS      +    +D  +++ A  R+A       PGL  +  E L+NAAD          +  +   +V ID +  +I V  NG G+PV + + HG+Y+ EL+FGH+   S+YNDN  ++  G NG G KL NI S    +E  D+  G+
Sbjct:   20 YQKLTQREHILQRPDTYVGS------VEAVTQDGWVFDAAAGRMAQRKLTYVPGLYKIFDEILVNAADNKQR------DTSMSEIRVEIDAAAGRISVQNNGKGVPVVMHQEHGIYVPELIFGHLLTSSNYNDNQKKVTGGRNGYGAKLANIFSSEFVVETSDSAEGK 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16622.4747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6C0DUT3_9ZZZZ8.250e-2237.50DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=viral ... [more]
A0A427BA93_ENSVE2.210e-2137.18HATPase_c domain-containing protein n=2 Tax=Ensete... [more]
A0A2I0B5J6_9ASPA2.890e-2139.74DNA topoisomerase 2 n=1 Tax=Apostasia shenzhenica ... [more]
A0A1E5VIM9_9POAL7.520e-2139.74DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A397HFF7_9GLOM1.730e-2037.58DNA topoisomerase 2 n=1 Tax=Diversispora epigaea T... [more]
A0A2V0P049_9CHLO1.870e-2039.10DNA topoisomerase 2 n=1 Tax=Raphidocelis subcapita... [more]
B6AEK2_CRYMR3.470e-2038.13DNA topoisomerase 2 n=2 Tax=Cryptosporidium TaxID=... [more]
A0A1D6Q7U3_MAIZE3.860e-2039.10DNA topoisomerase 2 n=1 Tax=Zea mays TaxID=4577 Re... [more]
A0A3L6F299_MAIZE4.460e-2039.10DNA topoisomerase 2 n=2 Tax=Zea mays TaxID=4577 Re... [more]
R1C6H3_EMIHU4.670e-2035.71DNA topoisomerase 2 n=2 Tax=Emiliania huxleyi TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00418TPI2FAMILYcoord: 47..62
score: 39.02
coord: 133..147
score: 53.01
coord: 90..103
score: 42.51
NoneNo IPR availablePANTHERPTHR10169DNA TOPOISOMERASE/GYRASEcoord: 2..161
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 5..162
e-value: 2.0E-29
score: 104.8
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 2..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16622contigEcto-sp13_S_contig16622:2440..2931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16622.4747.1mRNA_Ecto-sp13_S_contig16622.4747.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16622 2440..2931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16622.4747.1 ID=prot_Ecto-sp13_S_contig16622.4747.1|Name=mRNA_Ecto-sp13_S_contig16622.4747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp
FQKLTGGERILQRCFMCVGSTIPDDSLHFTIEDSGLYEKARVRLAPGLLN
VTKEALINAADRVSAVYEPGINIDVKTTKVAIDVSGSKICVFYNGTGIPV
ELVEYHGVYISELVFGHMHAYSDYNDNIDRLNTGLNGLGIKLTNILSKTL
CIEPLDANAGQNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf