mRNA_Ecto-sp13_S_contig16609.4741.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: D7FHD7_ECTSI (Indole-3-glycerol-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD7_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.110e-69 Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 3
Query: 573 RDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVVSVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
RDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAF+KKLGMEAVIQATSQEEIEQAVTSEDISIISIVGK VDEAVELRQYIPDRVVSV HVDRRSDEG+DEIEDCWQLRDAGYHTIWASEV
Sbjct: 139 RDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFSKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKMVDEAVELRQYIPDRVVSVVHVDRRSDEGMDEIEDCWQLRDAGYHTIWASEV 264
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A835YV94_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV94_9STRA) HSP 1 Score: 147 bits (371), Expect = 6.070e-38 Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 3
Query: 573 RDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVVSVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
RDLV+ EF++A AK GA GVT+ + LVGPERAAEL F L MEA++Q T+QEE+E A+ +I+S+ G DEA +L+++IPD V+++ HVDRRSDEGLDEIEDCW LRD+GY+ IWASE+
Sbjct: 185 RDLVVDEFQVAHAKTLGAIGVTISMGLVGPERAAELVDFTGALDMEAIVQVTNQEEVEAALQL-GATILSVTGNPPDEACDLKKHIPDSVLAIVHVDRRSDEGLDEIEDCWILRDSGYNCIWASEM 309
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A7S4D7N4_HETAK (Indole-3-glycerol-phosphate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7N4_HETAK) HSP 1 Score: 105 bits (261), Expect = 5.280e-22 Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 3
Query: 573 RDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAV-ELRQYIPDRVVSVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
RDL++ EF++A AGAAGVT+ L++VG ERAA+L A A KLG+EA+ Q TS EE EQA ++ + EA+ E+ IP+ ++ +A ++R +DEG++EIE+ WQLR GY+ +W SE+
Sbjct: 217 RDLIVDEFQLAEVAEAGAAGVTLSLSVVGAERAAQLRAAAAKLGLEAIAQVTSAEEAEQA---RELGFAMVAVAAGYEALREMYPRIPEDLLKIAFLERNTDEGMEEIEEAWQLRRQGYNGVWVSEL 340
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A7S2S9Q6_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Q6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.550e-13 Identity = 53/159 (33.33%), Postives = 93/159 (58.49%), Query Frame = 3
Query: 504 PTTIPCTDH-----LTGQSAGLS-----MS*MRRDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVVSVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
P+T CT+ +T Q + L + RD+V+ E ++A A+A A V + + ++G + E+ A A + G+E V++A ++ +IE+A + D +I++ G +VD+A+ L IP+ + +A+V D+ L E ED W+LRDAG +++ ASEV
Sbjct: 149 PSTGGCTEEDFEEIVTEQQSALGGFPGPAPVIYRDVVVDEVQLAHARACRADAVVLSVGVLGDDLQ-EMMAAAGEFGLEVVVEAKNEADIERAAAT-DAPMIALAGMSVDDAIALAPAIPEDRLKIAYVPVYDDKNLIEAEDAWRLRDAGINSVLASEV 305
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: K0S3T1_THAOC (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3T1_THAOC) HSP 1 Score: 76.3 bits (186), Expect = 6.010e-12 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 AGFIDGILSPELLCPLLRNGGAACIAVATEPLTGGCSDADLKTVVEEQENSRGDFPGPMPVI 186
+GF+ IL PE+L P+ R GAA +AV + GGC+ D+K +VEEQE +RGD PGP+PVI
Sbjct: 128 SGFVTDILQPEILSPVFREFGAAAVAVLADERMGGCTYDDVKAMVEEQEEARGDVPGPLPVI 189
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A8J2SDN4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDN4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.810e-11 Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 3
Query: 576 DLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAK-KLGMEAVI----QATSQEEI----EQAVTSEDISIISIVGKTVDE-AVELRQYIPDRVVSVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
D V+ E ++ARA GA VT+ L +G ER EL A+ K G+EA+I +A E + +QA S++ + G D A +++ D +V +A VD R D+GL+E E+ W LRDAGY +W S+V
Sbjct: 173 DAVVDEVQLARAAVGGAEAVTLNLETLGVERCNELKGVAEDKYGLEALIVCAPRAAGAEGLVPLMQQARDDVKASVLVVGGVAFDAMASAVKEMKSDDLVLIARVDARDDQGLEEAEEAWDLRDAGYDAVWVSDV 307
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: W7TXQ8_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXQ8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.810e-10 Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 3
Query: 576 DLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVVSVAHVDRRSDE---GLDEIEDCWQLRDAGYHTIWASEV 950
D+V+ +I+RAK AGAAG+T+ +L PE L A LGME ++ + E AV + ++ + G + +AVE+RQ + V + RR E GL+E+ED W LRDAG+H+++ S +
Sbjct: 241 DVVVDPVQISRAKLAGAAGITLRFSLTPPEVTLSLIQTALALGMEPMVFVRNSTEAAAAVGA-GARVVYLYGCSRAQAVEMRQDLDQDGVMIGFDLRRPREFQYGLNEVEDAWILRDAGFHSVYVSNL 367
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A7S0GKM6_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKM6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.550e-10 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 AGFIDGILSPELLCPLLRNGGAACIAVATEPLTGGCSDADLKTVVEEQENSRGDFPGPMPVI 186
AGFID IL P ++ R GA+ ++V + GGC+ D+K +V+EQ NS+G+ PGP+PVI
Sbjct: 123 AGFIDEILEPNIISSTFREFGASAVSVLADERVGGCTYDDIKIIVKEQSNSKGEVPGPLPVI 184
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A4D9D8Q3_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Q3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.350e-9 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 3
Query: 576 DLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVVSVAHVDRRSDE---GLDEIEDCWQLRDAGYHTIWASEV 950
D+V+ +I+RAK AGAAG+T+ +L PE L A LGME ++ + E AV + ++ + G + +AVE+RQ + V + RR E GL+E+ED W LRDAG+++++ S +
Sbjct: 143 DVVVDPVQISRAKLAGAAGITLRFSLTPPEVTLSLIQTALALGMEPMVFVRNSTEAAAAVGA-GARVVYLYGCSRAQAVEMRQDLDQDGVMIGFDLRRPREFQYGLNEVEDAWTLRDAGFNSVYVSNL 269
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Match: A0A7S4QWQ1_9STRA (Indole-3-glycerol-phosphate synthase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWQ1_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.380e-8 Identity = 39/133 (29.32%), Postives = 74/133 (55.64%), Query Frame = 3
Query: 576 DLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFAKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKTVDEAVELRQYIPDRVV--------SVAHVDRRSDEGLDEIEDCWQLRDAGYHTIWASEV 950
DL++ E ++A+A A GA VT+ L +V E+ + AK L +E ++ + E+ + AV + ++I + G VD A + I D +V +A++ ++++ L+E+E+ W RDAG++ +W S+
Sbjct: 184 DLIVDELQLAQAAAVGAKAVTITLGVVSAEKVSFYLKAAKTLDLEVIVNVATAEQAQAAVDA-GATLICVAG--VDGAENKKAVIADLIVPEGNKAVCKIANIVAKNNQQLEEVEEAWICRDAGFNAVWVSDA 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16609.4741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16609.4741.1 >prot_Ecto-sp13_S_contig16609.4741.1 ID=prot_Ecto-sp13_S_contig16609.4741.1|Name=mRNA_Ecto-sp13_S_contig16609.4741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp AGFIDGILSPELLCPLLRNGGAACIAVATEPLTGGCSDADLKTVVEEQENback to top mRNA from alignment at Ecto-sp13_S_contig16609:835..3862+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16609.4741.1 ID=mRNA_Ecto-sp13_S_contig16609.4741.1|Name=mRNA_Ecto-sp13_S_contig16609.4741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3028bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16609:835..3862+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16609:835..3862+ >mRNA_Ecto-sp13_S_contig16609.4741.1 ID=mRNA_Ecto-sp13_S_contig16609.4741.1|Name=mRNA_Ecto-sp13_S_contig16609.4741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16609:835..3862+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |