prot_Ecto-sp13_S_contig16602.4738.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16602.4738.1
Unique Nameprot_Ecto-sp13_S_contig16602.4738.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length279
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16602.4738.1 vs. uniprot
Match: A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.040e-128
Identity = 257/279 (92.11%), Postives = 263/279 (94.27%), Query Frame = 0 
Query:    1 MMSYLAVGDLLEDTITRSAQNQNGADDELSWLRRRLDSERRDPRARGKLALENVDGISSGGXXXXXXXXXXXXXXXRSVAKRAAPVDKENASAAAVAKPAESRANKVSPTGMSVLQLRRFLRAIGQPTSGLKPVLSARLEKAVASGAVKTFVDTARAQPRAAVECAGERRKADAMLAVAESMLNLDGSSTTSSAAGDATAPKKPLRESLSSANNEXXXXXXXXXXXXXXXXLQQQVPMTPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP 279
            MM+YLAVGDLLEDTITRSAQNQNGAD ELSWLRRRLDSERRDPRARGKLALENVDGISSGGXXXXXXXXXX     RSVAK+AAPVDKENASAAAVAKPA SRA+KV PTGMSVLQLRRFLR IGQPTSGLKPVLSARLEKAVASGAVKTFVDTARAQPRAAVECAGERRK DAMLAVAESMLNLDGS+TTSSAAGDAT PK+PLRESLSS    XXXXXXXXXXXXXXXX QQQVP+TPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP
Sbjct:    1 MMNYLAVGDLLEDTITRSAQNQNGADGELSWLRRRLDSERRDPRARGKLALENVDGISSGGXXXXXXXXXXQTQP-RSVAKKAAPVDKENASAAAVAKPAGSRASKVPPTGMSVLQLRRFLRVIGQPTSGLKPVLSARLEKAVASGAVKTFVDTARAQPRAAVECAGERRKTDAMLAVAESMLNLDGSNTTSSAAGDATTPKRPLRESLSSXXXXXXXXXXXXXXXXXXXXXQQQVPVTPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP 278
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BLAST of mRNA_Ecto-sp13_S_contig16602.4738.1 vs. uniprot
Match: D8LQB0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB0_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.640e-37
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0 
Query:  175 MLAVAESMLNLDGSSTTSSAAGDATAPKKPLRESLSSANNEXXXXXXXXXXXXXXXXLQQQVP-MTPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP 279
            MLAVAESMLN DGSSTTSSAAGDATAPK+PLRESLSSANN XXXXXXXXXXXXXXXX QQQVP +TPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP
Sbjct:    1 MLAVAESMLNPDGSSTTSSAAGDATAPKRPLRESLSSANNXXXXXXXXXXXXXXXXXXQQQVPPVTPATSKLSGQEQDAVVAKIRSAAKRSASPEKKLPYQDDDTP 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16602.4738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3Q6_9PHAE1.040e-12892.11SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQB0_ECTSI1.640e-3794.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 109..143
e-value: 2.8E-4
score: 30.2
IPR003034SAP domainPROSITEPS50800SAPcoord: 109..143
score: 9.627
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 86..153
e-value: 3.5E-6
score: 28.4
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 109..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16602contigEcto-sp13_S_contig16602:1..1844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16602.4738.1mRNA_Ecto-sp13_S_contig16602.4738.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16602 1..1844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16602.4738.1 ID=prot_Ecto-sp13_S_contig16602.4738.1|Name=mRNA_Ecto-sp13_S_contig16602.4738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp
MMSYLAVGDLLEDTITRSAQNQNGADDELSWLRRRLDSERRDPRARGKLA
LENVDGISSGGGSGSSSSSSSSQPQPRSVAKRAAPVDKENASAAAVAKPA
ESRANKVSPTGMSVLQLRRFLRAIGQPTSGLKPVLSARLEKAVASGAVKT
FVDTARAQPRAAVECAGERRKADAMLAVAESMLNLDGSSTTSSAAGDATA
PKKPLRESLSSANNERSSRSSAGDSVDKSQPLQQQVPMTPATSKLSGQEQ
DAVVAKIRSAAKRSASPEKKLPYQDDDTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf