prot_Ecto-sp13_S_contig16600.4736.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16600.4736.1
Unique Nameprot_Ecto-sp13_S_contig16600.4736.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length365
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16600.4736.1 vs. uniprot
Match: A0A6H5L6G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G4_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.140e-30
Identity = 208/275 (75.64%), Postives = 211/275 (76.73%), Query Frame = 0 
Query:    1 SSCRRHRKGGLRRMAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGHDAVMPDVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGKTSPGVIGRPSKTNKSAAADQSVAAAAGVNAAGIAVSATAAAAG-------SRERLLGDSSMPVSGFGGVVAKAGGVGRXXXXXXXXXXXXXXXXXXXXXX--EGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS 266
            ++ RRHRKGGLRR+AGAGAXXXXXXXXXXXXXXX            XXXXXXXXXRGG DAVMPDVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 KTSPGVIGRPSKTNKSAAADQ                              SRERLLGDSSMPVSGFGGVVAKAGGVGRXXXXXXXXXXXXXXXXXXXXXX  EGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS
Sbjct:   14 AAARRHRKGGLRRVAGAGAXXXXXXXXXXXXXXXSCSASVSSGPTGXXXXXXXXXRGGRDAVMPDVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----------------KTSPGVIGRPSKTNKSAAADQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRERLLGDSSMPVSGFGGVVAKAGGVGRXXXXXXXXXXXXXXXXXXXXXXXXEGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS 272
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BLAST of mRNA_Ecto-sp13_S_contig16600.4736.1 vs. uniprot
Match: D8LDQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ6_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.930e-30
Identity = 227/276 (82.25%), Postives = 232/276 (84.06%), Query Frame = 0 
Query:    1 SSCRRHRKGGLRRMAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--GGHDAVMPDVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGKTSPGVIGRPSKTNKSAAADQSVAAAAGVNAAGIAVSATAAAAG--------SRERLLGDSSMPVSGFGGVVAKAGGVGRXXXXXXXXXXXXXXXXXXXXXXEGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS 266
            ++ RRHRKGGLRR+AGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GG DAVMPDVA A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KTSPGVIGRPSKTNKSAAADQS                              +RERLLGD+SMPVSGF GVV KAGGVGR  XXXXXXXXXXXXXXXXXXXXEGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS
Sbjct:   81 AAARRHRKGGLRRVAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRDAVMPDVAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSPGVIGRPSKTNKSAAADQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARERLLGDASMPVSGFSGVVTKAGGVGRRGXXXXXXXXXXXXXXXXXXXXEGWRRYVYPSGTVYEGDMVDDKREGDGVYIDKNS 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16600.4736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6G4_9PHAE1.140e-3075.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ6_ECTSI5.930e-3082.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003409MORN motifSMARTSM00698morncoord: 336..357
e-value: 7.4E-4
score: 28.8
coord: 290..311
e-value: 0.3
score: 18.0
coord: 267..288
e-value: 0.0015
score: 27.8
coord: 313..334
e-value: 1.7E-6
score: 37.6
coord: 244..265
e-value: 1.4
score: 13.0
IPR003409MORN motifPFAMPF02493MORNcoord: 246..268
e-value: 0.095
score: 12.6
coord: 338..360
e-value: 1.5E-5
score: 24.6
coord: 269..290
e-value: 9.5E-6
score: 25.2
coord: 315..337
e-value: 1.2E-7
score: 31.1
coord: 293..314
e-value: 4.4E-6
score: 26.3
NoneNo IPR availableGENE3D2.20.110.10coord: 231..294
e-value: 1.2E-9
score: 40.1
coord: 295..365
e-value: 7.6E-17
score: 63.5
NoneNo IPR availablePANTHERPTHR43215FAMILY NOT NAMEDcoord: 206..289
NoneNo IPR availablePANTHERPTHR43215FAMILY NOT NAMEDcoord: 280..365
NoneNo IPR availablePANTHERPTHR43215:SF4RADIAL SPOKE HEAD 1 HOMOLOGcoord: 280..365
NoneNo IPR availablePANTHERPTHR43215:SF4RADIAL SPOKE HEAD 1 HOMOLOGcoord: 206..289
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 288..365
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 233..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16600contigEcto-sp13_S_contig16600:966..3334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16600.4736.1mRNA_Ecto-sp13_S_contig16600.4736.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16600 966..3334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16600.4736.1 ID=prot_Ecto-sp13_S_contig16600.4736.1|Name=mRNA_Ecto-sp13_S_contig16600.4736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
SSCRRHRKGGLRRMAGAGATAGPGCIAGTGSITASSSASVSSGPTGGGAI
SGGGARGGHDAVMPDVAAAAAAAAAATAGAASSSTVDASASSPSRASNAA
AGTAAAAAAAAAAAAATSAAAAGSRSSSPSPAAAVAVGKTSPGVIGRPSK
TNKSAAADQSVAAAAGVNAAGIAVSATAAAAGSRERLLGDSSMPVSGFGG
VVAKAGGVGRRGGGGGMVTGVAAAAAAGGGGGEGWRRYVYPSGTVYEGDM
VDDKREGDGVYIDKNSNRYEGQWRNDRAEGYGIKVFAKGDKHEGYYSNDK
RNGFGTYYWANGDRYKGEWKDGMMHGKGTFMWSKGDMYEGHWRAGKMHGH
GVKKMGNGDVYEGMW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN