prot_Ecto-sp13_S_contig1659.4729.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1659.4729.1
Unique Nameprot_Ecto-sp13_S_contig1659.4729.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1659.4729.1 vs. uniprot
Match: D7FKT9_ECTSI (Tim44 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT9_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 2.860e-104
Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0 
Query:    1 MRVVGIIRRGISSSSSRLGEVRSSGGIFDPYVYRGARGKSLPPMMSSEGVKERLGIMRGHLKSGVCAGIIQKHVPAFHASKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKSKGAQRAAFRLVDFKEPTRVLQMRVDRKKHISPKEGWGQAS 166
            MRVVGIIRRGISSSSSRLGEVRSSGGIFDPYVYRGA GK LPPMMSSEGV+ERLGIMR HLKSGVCAGIIQKHVP FH SKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKS+GAQRAAFRLVDFKEPT VLQMRVDRKKHISPKEGWGQ +
Sbjct:    1 MRVVGIIRRGISSSSSRLGEVRSSGGIFDPYVYRGAGGKGLPPMMSSEGVRERLGIMRSHLKSGVCAGIIQKHVPDFHVSKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKSRGAQRAAFRLVDFKEPTTVLQMRVDRKKHISPKEGWGQVT 166
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BLAST of mRNA_Ecto-sp13_S_contig1659.4729.1 vs. uniprot
Match: A0A6H5K0Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 4.510e-30
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:   15 SSRLGEVRSSGGIFDPYVYRGARGKSLPPMMSSEGVKERLGIMRGHLKSGVCAGIIQKH 73
            SSRLGEVRSSGG+FDPYVYRGA GK LPPMMSSEGVKERLGIMRGHLKSGVCAGIIQ H
Sbjct:   21 SSRLGEVRSSGGVFDPYVYRGAGGKGLPPMMSSEGVKERLGIMRGHLKSGVCAGIIQVH 79
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BLAST of mRNA_Ecto-sp13_S_contig1659.4729.1 vs. uniprot
Match: A0A835YW25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW25_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.730e-26
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0 
Query:   42 PPMMSSEGVKERLGIMRGHLKSGVCAGIIQKHVPAFHASKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEI-KSSKSKGAQ---RAAFRLVDFKEPTRVLQMRVDRKKHISPKEGWGQ 164
            PP+ +  G+K R  + +GH+KS     II+KHVP F    FPP+A+Q+F+ F +AHRKGD  +L  L TE L+ ++K ++ +  +  G++   RAAF+L+   EPT VLQ+R   +K    K GWGQ
Sbjct:    5 PPVYTLAGLKHRFTVYKGHMKSSAAIAIIKKHVPGFSPKTFPPIADQVFQSFIDAHRKGDLPSLCNLATEGLHDNVKADVTRMGRKPGSEPKPRAAFKLLRMMEPTYVLQVRAAMEKGSGGKRGWGQ 131
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1659.4729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKT9_ECTSI2.860e-10493.98Tim44 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K0Z7_9PHAE4.510e-3093.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YW25_9STRA4.730e-2642.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.240coord: 63..166
e-value: 3.1E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR28554FAMILY NOT NAMEDcoord: 22..150
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 63..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1659contigEcto-sp13_S_contig1659:2..2665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1659.4729.1mRNA_Ecto-sp13_S_contig1659.4729.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1659 2..2665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1659.4729.1 ID=prot_Ecto-sp13_S_contig1659.4729.1|Name=mRNA_Ecto-sp13_S_contig1659.4729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
MRVVGIIRRGISSSSSRLGEVRSSGGIFDPYVYRGARGKSLPPMMSSEGV
KERLGIMRGHLKSGVCAGIIQKHVPAFHASKFPPVANQIFKDFFEAHRKG
DTRALAGLTTEELYASLKGEIKSSKSKGAQRAAFRLVDFKEPTRVLQMRV
DRKKHISPKEGWGQAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf