prot_Ecto-sp13_S_contig16575.4722.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16575.4722.1
Unique Nameprot_Ecto-sp13_S_contig16575.4722.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length510
Homology
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: D7FYJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ5_ECTSI)

HSP 1 Score: 743 bits (1919), Expect = 6.620e-260
Identity = 462/512 (90.23%), Postives = 475/512 (92.77%), Query Frame = 0
Query:    1 GLKQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNRAGGRLRNREGSATGGVGGFRRGRRDDSGALAVRDNQNTISPPGKQSPILWQNGQGAAYAGXXXXXXXXXXXXXEEAWAGEGRVGAAFERAGXXXXXXXXXXXXX--SVKSSVARLESSPRGNPVTPGGTAAATTPVGMGTGGGALGRITPTGAGLSTAVRAPSPLRSTRGLQVQGVGAEAGELFSEEAVTPVGESGAGVTDLPSARSRRSSAXXXXXXXXXXXXXXXXXXXXXXXXXXTSVAARVGTWPPPSPVPSSTRLWQKRTENHATPGPAPSPAPPSTTAAPPAQTSGNITQNTVKSLVESYKPPHLQGTTTASQRQQQEQPGSGSAASRTLVSPSVVDLAGSGPVGNGDGLTGGGAGVGRMGIAAEEKLDNYESALEEESDSDSAPKKISGPVKACEVDGCTLEACWGDPRFRPRYCARHKKQGNKLM 510
            G  QGFVETQRMTI+EGGMFIGDAKVEEADVYGSLDGSLES+AKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNR GGRLRNREGSATGGVGG RRG RDDSGALAVRDNQNTISPPGKQSPILWQNGQGAAYAGXXXXXXXXXXX   EAWAG GRVGAA ERAG XXXXXXXXXXXX  SV SSVARLE+SPRGNPV PGGTAAATTPVG+GTGGGAL RITPTGAGLSTAVRAPSPLR TRGLQVQG+GAEAGELF EEAVTPVGESGAGVT+LPS RSRR SA   XXXXXXXXXXXXXXXXXXXXXX TSVAARVGTWPPPSPVPSSTRLWQ+RTENH TP PA   APPSTTAAPPAQTSG++TQNTVKSLVESYKPP+LQG+TTASQRQQQEQPGS SAASRTL  PSV DLAGSGPVGNGDG+ GGGAGVGRMGI AEEKLDNYESALEEESDSDSA K ISGPVKACEV+GCTLEACWGDPRFRPRYCARHKKQGNKLM
Sbjct:  112 GRLQGFVETQRMTIKEGGMFIGDAKVEEADVYGSLDGSLESSAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNRVGGRLRNREGSATGGVGGLRRGSRDDSGALAVRDNQNTISPPGKQSPILWQNGQGAAYAGXXXXXXXXXXX---EAWAGGGRVGAALERAGGXXXXXXXXXXXXXXSVMSSVARLEASPRGNPVPPGGTAAATTPVGVGTGGGALRRITPTGAGLSTAVRAPSPLRPTRGLQVQGLGAEAGELFCEEAVTPVGESGAGVTNLPSTRSRRLSATAGXXXXXXXXXXXXXXXXXXXXXX-TSVAARVGTWPPPSPVPSSTRLWQRRTENHTTPAPAXXXAPPSTTAAPPAQTSGSVTQNTVKSLVESYKPPYLQGSTTASQRQQQEQPGSVSAASRTLAPPSVADLAGSGPVGNGDGVAGGGAGVGRMGIPAEEKLDNYESALEEESDSDSAAK-ISGPVKACEVEGCTLEACWGDPRFRPRYCARHKKQGNKLM 618          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A6H5K3I7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I7_9PHAE)

HSP 1 Score: 736 bits (1899), Expect = 6.790e-260
Identity = 449/513 (87.52%), Postives = 458/513 (89.28%), Query Frame = 0
Query:    1 GLKQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNRAGGRLRNREGSATGGVGGFRRGRRDDSGALAVRDNQNTISPPGKQSPILWQNGQGAAYAGXXXXXXXXXXXXXEEAWAGEGRVGAAFERAGXXXXXXXXXXXXXSVKSSVARLESSPRGNPVTPGGTAAATTPVGMGTGGGALGRITPTGAGLSTAVRAPSPLRSTRGLQVQGVGAEAGELFSEEAVTPVGESGAGVTDLPSARSRRSSAXXXXXXXXXXXXXXXXXXXXXXXXXX---TSVAARVGTWPPPSPVPSSTRLWQKRTENHATPGPAPSPAPPSTTAAPPAQTSGNITQNTVKSLVESYKPPHLQGTTTASQRQQQEQPGSGSAASRTLVSPSVVDLAGSGPVGNGDGLTGGGAGVGRMGIAAEEKLDNYESALEEESDSDSAPKKISGPVKACEVDGCTLEACWGDPRFRPRYCARHKKQGNKLM 510
            G  QGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMT+EDGGELEGTFECS RAGGRLRNREGSATGGVGG RRG R DSGA AVRDNQNTISPPGKQSPILWQNGQGAAYAG  XXXXXXXXX  EEAWAG GRVGAA ERAG   XXXXXXXXXXSV SSVA LESSPRG+PVTPG TAAATTPVG  TGGGA  R+TPTGAG STAVRAPSPLRSTRGLQVQG+GAEAGELFSEEAVTPVGESGAGVTDLPSARSRRSSA   XXXXXXXXXXX               TSVAARVGTWPPPSPVPSSTRLWQKRTENH TP PAPSP PPSTTAAPP+QTSG+ITQNTVKSLVESYKPPHLQGTTTASQRQQ EQPGSGSA SRTLVSPSV  LAGSGPV NGD +TGG AGVGRMGIAAEEKLDNYESALEEESDSDSAP+ I+G VKACE DGCTLEACWGDPRFRPRYCARHKKQGNKLM
Sbjct:  112 GRLQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTLEDGGELEGTFECS-RAGGRLRNREGSATGGVGGLRRGSRVDSGASAVRDNQNTISPPGKQSPILWQNGQGAAYAGGAXXXXXXXXX--EEAWAGGGRVGAALERAGVGGXXXXXXXXXXSVMSSVAGLESSPRGHPVTPGDTAAATTPVG--TGGGARRRVTPTGAGRSTAVRAPSPLRSTRGLQVQGLGAEAGELFSEEAVTPVGESGAGVTDLPSARSRRSSATAGXXXXXXXXXXXCDGSAEEEGTSGGGGTSVAARVGTWPPPSPVPSSTRLWQKRTENHITPAPAPSPTPPSTTAAPPSQTSGSITQNTVKSLVESYKPPHLQGTTTASQRQQLEQPGSGSAVSRTLVSPSVSGLAGSGPVSNGDSVTGGRAGVGRMGIAAEEKLDNYESALEEESDSDSAPR-IAGSVKACEGDGCTLEACWGDPRFRPRYCARHKKQGNKLM 618          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: X0WVX5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0WVX5_9ZZZZ)

HSP 1 Score: 57.8 bits (138), Expect = 1.110e-6
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 GLKQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGEL 70
            G  +G +  + + +R GG   G   V+ A++YG+L G +     +S+RSTGSVSGNV Y ++ ME GG+L
Sbjct:   30 GYVEGTIVGENLIVRPGGRCHGTIDVQSAEIYGTLQGEISVRQLMSVRSTGSVSGNVQYGRLAMEFGGDL 99          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A7H1NPX9_9PROT (Polymer-forming cytoskeletal n=2 Tax=Entomobacter blattae TaxID=2762277 RepID=A0A7H1NPX9_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 2.080e-6
Identity = 25/69 (36.23%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    7 VETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFE 75
            ++   ++I +GG+F G+ +VE A++YG +DG+L ++  ++I STG + G+   KK+ +E+GG++ G  E
Sbjct:   77 IKATEISIAKGGVFRGNIEVENAEIYGKMDGTLTASKNLTIHSTGQIVGHARCKKLQVEEGGQVSGQME 145          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A5R9JDU5_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=Lichenicoccus roseus TaxID=2683649 RepID=A0A5R9JDU5_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 2.480e-6
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    7 VETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNRAGG 82
            +E   + +  GGMF G AKV++A+V G++DG+L ++  ++IR TG V G+     +T+E GG++ G FE S   GG
Sbjct:  117 IEAIELHVAPGGMFRGSAKVQDAEVAGTVDGTLTASGTLTIRPTGRVIGSAKCGSLTVEPGGQVTGQFETSFGQGG 192          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: UPI001BD0EB9D (polymer-forming cytoskeletal protein n=1 Tax=Roseococcus sp. XZZS9 TaxID=2835040 RepID=UPI001BD0EB9D)

HSP 1 Score: 57.4 bits (137), Expect = 2.500e-6
Identity = 29/77 (37.66%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    4 QGFVETQ-----RMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFE 75
            +G VE+Q      +++ + G+F G+ +VE+A++ G  DG+L +   + IRSTG V G   YKK+++E+GG++ G+ E
Sbjct:   57 EGTVESQMIQAAELSVTQTGVFRGEVQVEDAEIGGLFDGTLTARGNLIIRSTGKVKGMARYKKLSVEEGGQIVGSME 133          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A4R0YB97_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=Roseococcus sp. SYP-B2431 TaxID=2496640 RepID=A0A4R0YB97_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 2.610e-6
Identity = 25/69 (36.23%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    7 VETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFE 75
            ++   +++ + G+F G+ +VE+A++ G  DG+L +   + IRSTG V G   YKK+++E+GG++ G+ E
Sbjct:   67 IQAAELSVTQTGVFRGEVQVEDAEIGGLFDGTLTARGNLVIRSTGKVKGMARYKKLSVEEGGQIVGSME 135          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A7W4IG39_9PROT (Polymer-forming cytoskeletal protein n=2 Tax=Gluconacetobacter sacchari TaxID=92759 RepID=A0A7W4IG39_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 3.860e-6
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    7 VETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFE 75
            +  Q + +  GGMF G+ +VE+AD+ G++DG+L     ++IRSTG + G    +++ +EDGG++ G  E
Sbjct:   68 INAQELQVTHGGMFRGEIEVEDADLAGTIDGTLTVRGSLTIRSTGRLLGKAKCRRLQVEDGGQVSGHLE 136          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A1Q3VA54_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 69-11 TaxID=1895825 RepID=A0A1Q3VA54_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 5.240e-6
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    7 VETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFECSNRA 80
            +    + I +GG+F G+ +VEEA++ G++DG+L   A + +R+TG V G    +++ +EDGG++ G  E    A
Sbjct:   70 IHATELAIAQGGVFKGEVEVEEAEIAGTIDGTLTVRASLIVRATGRVLGTARCRRLQVEDGGQITGRIEMITEA 143          
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Match: A0A7Y7M894_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Nguyenibacter vanlangensis TaxID=1216886 RepID=A0A7Y7M894_9PROT)

HSP 1 Score: 56.6 bits (135), Expect = 7.830e-6
Identity = 25/74 (33.78%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 LKQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRSTGSVSGNVIYKKMTMEDGGELEGTFE 75
            ++   +  Q + +  GGMF G+ +VE+AD+ G++DG+L     ++IR+TG + G    +++ +EDGG++ G  E
Sbjct:   66 VESSMIHAQELQVAHGGMFRGEVEVEDADLAGTIDGTLTVRGSLTIRATGRLLGKAKCRRLQVEDGGQVTGHLE 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16575.4722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ5_ECTSI6.620e-26090.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3I7_9PHAE6.790e-26087.52Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
X0WVX5_9ZZZZ1.110e-641.43Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7H1NPX9_9PROT2.080e-636.23Polymer-forming cytoskeletal n=2 Tax=Entomobacter ... [more]
A0A5R9JDU5_9PROT2.480e-640.79Polymer-forming cytoskeletal protein n=2 Tax=Liche... [more]
UPI001BD0EB9D2.500e-637.66polymer-forming cytoskeletal protein n=1 Tax=Roseo... [more]
A0A4R0YB97_9PROT2.610e-636.23Polymer-forming cytoskeletal protein n=2 Tax=Roseo... [more]
A0A7W4IG39_9PROT3.860e-637.68Polymer-forming cytoskeletal protein n=2 Tax=Gluco... [more]
A0A1Q3VA54_9PROT5.240e-635.14Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A7Y7M894_9PROT7.830e-633.78Polymer-forming cytoskeletal protein n=1 Tax=Nguye... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 4..74
e-value: 1.2E-12
score: 48.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16575contigEcto-sp13_S_contig16575:147..3674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16575.4722.1mRNA_Ecto-sp13_S_contig16575.4722.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16575 147..3674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16575.4722.1 ID=prot_Ecto-sp13_S_contig16575.4722.1|Name=mRNA_Ecto-sp13_S_contig16575.4722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp
GLKQGFVETQRMTIREGGMFIGDAKVEEADVYGSLDGSLESTAKVSIRST
GSVSGNVIYKKMTMEDGGELEGTFECSNRAGGRLRNREGSATGGVGGFRR
GRRDDSGALAVRDNQNTISPPGKQSPILWQNGQGAAYAGGAAAAAAAAAA
AGEEAWAGEGRVGAAFERAGGGGGTGGGGSGGGSVKSSVARLESSPRGNP
VTPGGTAAATTPVGMGTGGGALGRITPTGAGLSTAVRAPSPLRSTRGLQV
QGVGAEAGELFSEEAVTPVGESGAGVTDLPSARSRRSSATVGGGGSGGGG
GDGSAEEEGTIGGGGTSVAARVGTWPPPSPVPSSTRLWQKRTENHATPGP
APSPAPPSTTAAPPAQTSGNITQNTVKSLVESYKPPHLQGTTTASQRQQQ
EQPGSGSAASRTLVSPSVVDLAGSGPVGNGDGLTGGGAGVGRMGIAAEEK
LDNYESALEEESDSDSAPKKISGPVKACEVDGCTLEACWGDPRFRPRYCA
RHKKQGNKLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B