prot_Ecto-sp13_S_contig16565.4715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16565.4715.1
Unique Nameprot_Ecto-sp13_S_contig16565.4715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length214
Homology
BLAST of mRNA_Ecto-sp13_S_contig16565.4715.1 vs. uniprot
Match: A0A6H5KVA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVA5_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 3.530e-136
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0
Query:    1 LFQAPRRGEQRGAVALSALVESCLSEARPRCARLLTDVEAAAAGEMPLLQFGTDAQGIVDEAVQSFLAKSSISQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAELIKLNEDMESRVQDRLSEGTWMLPPDPAEQAAAARKKTPWWKG 213
            L +APRRGEQ+GAVALSAL E CLSEARPRCARLLTDVEAAAAGEMPLLQFGTDAQGIVDEAVQSFLAKSS SQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAEL+KLNEDMESRVQDRLSEGTWMLPPDPAEQAAAARKKTPWWKG
Sbjct:  377 LAEAPRRGEQQGAVALSALAEFCLSEARPRCARLLTDVEAAAAGEMPLLQFGTDAQGIVDEAVQSFLAKSSRSQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAELVKLNEDMESRVQDRLSEGTWMLPPDPAEQAAAARKKTPWWKG 589          
BLAST of mRNA_Ecto-sp13_S_contig16565.4715.1 vs. uniprot
Match: D8LCC3_ECTSI (RHD3c, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC3_ECTSI)

HSP 1 Score: 397 bits (1020), Expect = 1.370e-133
Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 0
Query:    1 LFQAPRRGEQRGAVALSALVESCLSEARPRCARLLTDVEAAAAGEMPLLQFGTDAQGIVDEAVQSFLAKSSISQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAELIKLNEDMESRVQDRLSEGTWMLPPDPAEQAAAARKKTPWWKG 213
            L +APRRGEQ+GAVALSAL ESCLSEARPRCARLLTDVEAA AGEMPLLQFGTDAQ IVDEAVQSFLAKSS SQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEE+FSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAEL+KLNEDMESRVQDRLSEGTWMLP DPAEQAAAARKKTPWWKG
Sbjct:  326 LAEAPRRGEQQGAVALSALAESCLSEARPRCARLLTDVEAAVAGEMPLLQFGTDAQEIVDEAVQSFLAKSSRSQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEVFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNTPGVADVWRLHWEAELVKLNEDMESRVQDRLSEGTWMLPSDPAEQAAAARKKTPWWKG 538          
BLAST of mRNA_Ecto-sp13_S_contig16565.4715.1 vs. uniprot
Match: A0A4D9D2G8_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2G8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.960e-12
Identity = 62/221 (28.05%), Postives = 102/221 (46.15%), Query Frame = 0
Query:    6 RRGEQRGAVALSALVESCLSEARPRCARLLTDVEAAAAGEMPLLQFGTDAQGIVDEAVQSFLAK--SSISQIDAPAAVLREKRGSLVSAVARELEPAFRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATKLAIPNT-----------PGVADVWRLHWEAELIKLNEDMESRVQDRLSEGTWMLPPDPAEQAAAARK-KTPWWK 212
            RR E+  A  L  +++SC+ EA     RL   VEAAA+ EMP+L++G DA  IV  A+QS  A+   S S    P +     +  L+  + R L P++R H   L   +  +F++ F  +       D+ ++ ++  +   F +A   A+P+T            G    W   WE  + +L ++M+  V DR  E   + P +   Q    R  +  WW+
Sbjct:  527 RREEEVQAFVLRKILDSCMEEAEQGIERLERKVEAAAS-EMPILEYGRDADAIVRAALQSLEARLPPSTSSHSTPES---SPQADLLKRLTRRLAPSYRQHVDALEDFYFGKFQDRFVGLFLPLRALDREAKFLTNDVATAFHKAAVTAVPSTFRMKEEKKNGGKGEGGDWS--WEGAMERLRDEMDVEVADRRMEVEVLFPGEEEVQGGKNRLLRASWWR 741          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16565.4715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVA5_9PHAE3.530e-13696.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCC3_ECTSI1.370e-13395.31RHD3c, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A4D9D2G8_9STRA2.960e-1228.05GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 47..156
e-value: 2.1E-5
score: 22.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16565contigEcto-sp13_S_contig16565:491..3676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16565.4715.1mRNA_Ecto-sp13_S_contig16565.4715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16565 491..3676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16565.4715.1 ID=prot_Ecto-sp13_S_contig16565.4715.1|Name=mRNA_Ecto-sp13_S_contig16565.4715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp
LFQAPRRGEQRGAVALSALVESCLSEARPRCARLLTDVEAAAAGEMPLLQ
FGTDAQGIVDEAVQSFLAKSSISQIDAPAAVLREKRGSLVSAVARELEPA
FRAHARHLRGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATK
LAIPNTPGVADVWRLHWEAELIKLNEDMESRVQDRLSEGTWMLPPDPAEQ
AAAARKKTPWWKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1