mRNA_Ecto-sp13_S_contig16532.4702.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: D7G7H5_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H5_ECTSI) HSP 1 Score: 371 bits (953), Expect = 8.810e-125 Identity = 200/235 (85.11%), Postives = 210/235 (89.36%), Query Frame = 1
Query: 337 MIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMRFLRQTNIEAQSVGIELRNQVETLQKEEKSQGLPRATEQRIRRGLALLVEKDLRKQVATLTQSHSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESVRQKHLNYVRRLGNVVQRFHGSSCRSSCNFVLDPK 1041
MI+ELHASLLKLHDNLRRSEEMAA RLKAVEDEKAALEVA REERAKTAMQEKTM FLRQTNI+AQSV IELRNQ+ETLQKE+KSQGL EQ+IR GLA LVE DL+KQVATL Q EQ DEIRSL+ QLQGLEVN VPL GGLITVLSSQGASATFTSLGNAHPDCSRL ADFYPGW PGGVAIVRMFRITVP VRQKHLNY RRLGNVVQRFHG+SCRS+CNF+LDPK
Sbjct: 1 MIQELHASLLKLHDNLRRSEEMAAARLKAVEDEKAALEVALREERAKTAMQEKTMHFLRQTNIQAQSVEIELRNQMETLQKEKKSQGLSHTKEQKIRSGLARLVENDLQKQVATLAQLRREQVDEIRSLSIQLQGLEVNRVPLIGGLITVLSSQGASATFTSLGNAHPDCSRLRADFYPGWEAPGGVAIVRMFRITVPAGVRQKHLNYARRLGNVVQRFHGTSCRSACNFILDPK 235
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: A0A6H5JJM5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM5_9PHAE) HSP 1 Score: 342 bits (878), Expect = 2.480e-113 Identity = 207/293 (70.65%), Postives = 225/293 (76.79%), Query Frame = 1
Query: 1 MKAWQRINHWRRRSSKWSKSKNPPPEGSAQAEEETSRPAQAGAAHVILLVGELEDILLRVEQVQPNGNGEEEETKVDRSRQTYGPKESTGEDPVVERLMRKQEELVRTGNNE-MIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMRFLRQTNIEAQSVGIELRNQVETLQKEEKSQGLPRATEQRIRRGLALLVEKDLRKQVATLTQSHSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPG 876
MKAWQR+ HWR SSKWS +K PP EGSAQAEE A+A AAH+IL GEL IL RV QVQP+GNGEEE+TKVD SRQ+YGPKES GEDPV ERL+RK E LVRTGN E MIE LH SLLKLHD RRSEEMAA RLKAVEDEKAA EVA REE+AKT MQEKTM FLR+TNI+AQSV E+ ++ GLALLVEK+LRKQVATLTQS S+QA EIRSL+TQLQGLEVN VPL GGLITVLSSQGASATF LG AHPDC+RL ADFYPG
Sbjct: 1 MKAWQRMTHWRWCSSKWSTAKTPPQEGSAQAEEXXXXXAKAAAAHMILFAGELGGILPRVGQVQPDGNGEEEKTKVDPSRQSYGPKESPGEDPVDERLLRKHEGLVRTGNEEEMIEGLHVSLLKLHDIPRRSEEMAAARLKAVEDEKAAFEVAKREEKAKTTMQEKTMHFLRRTNIQAQSV--EMSCEIRWS-------------------GLALLVEKNLRKQVATLTQSLSQQAGEIRSLSTQLQGLEVNKVPLIGGLITVLSSQGASATFIPLGIAHPDCTRLRADFYPG 272
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: D7G7H4_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H4_ECTSI) HSP 1 Score: 271 bits (692), Expect = 4.650e-84 Identity = 188/356 (52.81%), Postives = 230/356 (64.61%), Query Frame = 1
Query: 1 MKAWQRINHWRRRSSKWSKSKNPPPEGSAQAEEETSRPAQAGAAHVILLVGELEDILLRVEQVQPNGNGEEEETKVDRSRQTYGPKEST------GEDPVVERLMRKQEELVRTGNNEMIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMRFLRQTNIEAQSVGIELRNQVETLQKEEKSQGL---PRATEQRIRRGLALLVEKDLRKQVATLTQSHSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESVRQKHLNYVRRLGNVVQRFHGSSCRSSCNFVLDPK 1041
MKA R+ WR RSS SKS P E P QA A L V L+ V Q++PNG+ E EETKVD +YGP + GED ERL+ KQEELVR + E I+EL ASLL+LH++ RRSEE+AA RLKAVE EKAALEVA + ERAKTAMQ+KTM FLRQ +IEAQSV +LRN+++TL K EKSQG E+++RRGLA LVEKDLRK+VA L QS +Q EIRSL T LQ L+ NG ++TV ++QGA T ++L + +PDC+RL DF W + G+AI R+ RITVP +R KH Y R VV RFHG+SC S+CN VLDPK
Sbjct: 1 MKALHRVTRWRWRSSTSSKSNTSPEE-----------PEQAKDA---LAVRSLDGNRPPVGQLEPNGHQEGEETKVDAPGHSYGPNQLIAEDQRHGEDNADERLLSKQEELVRNSDKEEIQELCASLLQLHNDRRRSEEIAAARLKAVEGEKAALEVAIQAERAKTAMQQKTMHFLRQISIEAQSVETQLRNELQTL-KNEKSQGTNGHSDTKEEKMRRGLARLVEKDLRKRVAVLEQSQRQQVGEIRSLLTPLQVLQRNGGSHFDRILTVGNNQGA--TLSALYDGNPDCTRLRDDFLSAWRL-NGLAIERILRITVPADIRAKHDKYARSHRTVVGRFHGTSCGSTCNLVLDPK 338
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: D7G7H6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7H6_ECTSI) HSP 1 Score: 252 bits (644), Expect = 1.080e-76 Identity = 170/355 (47.89%), Postives = 214/355 (60.28%), Query Frame = 1
Query: 1 MKAWQRINHWRRRSSKWSKSKNPPPEGSAQAEEETSRPAQAGAAHVILLVGELEDILLRVEQVQPNGNGEEEE-TKVDRSRQTYGP------KESTGEDPVVERLMRKQEELVRTGNNEMIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMRFLRQTNIEAQSVGIELRNQVETLQ-KEEKSQGLPRATEQRIRRGLALLVEKDLRKQVATLTQSHSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESVRQKHLNYVRRLGNVVQRFHGSSCRSSCNFVLDPK 1041
MK W + WRRR SK S+ ++P P Q+ + ++ LV EL+ R+ + QP+ N EEEE TKVD SR +YG ++ G D ERL+RKQE LVR EKAALEVA ERAKTA Q+KTM FLR+TNIEAQS+ ELR+QVETL+ +G + E+++R GLA LVEKDLRKQVATL QS +QA+EIR L QLQ L+ NG P ++TV S+QGA+AT ++LG++HPDC RL ADF GW G+AI R+FRITVP V + H YVR GNVVQRFHG+SCRS+CNF++DPK
Sbjct: 1 MKLWHKATRWRRRGSKCSELESPLPRAPVQSV------GNHNSKSIVWLVSELDGNTSRIGENQPDVNQEEEEETKVDPSRHSYGAMGFVAEEQRRGGDNADERLLRKQE-LVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAALEVALLAERAKTARQQKTMHFLRETNIEAQSLETELRDQVETLKIASGHGEGRFQTKEEKVRSGLARLVEKDLRKQVATLEQSTGQQANEIRVLLAQLQVLQRNGEPHIDSVLTVGSTQGANATLSALGDSHPDCPRLRADFLSGWRTLTGLAIERIFRITVPAGVGETHAGYVRSHGNVVQRFHGTSCRSTCNFIIDPK 348
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: A0A6H5JEL8_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL8_9PHAE) HSP 1 Score: 241 bits (616), Expect = 2.220e-71 Identity = 184/405 (45.43%), Postives = 230/405 (56.79%), Query Frame = 1
Query: 1 MKAWQRINHWRRRSSKWSKSKNPPPEGSAQAEEETSRPAQAGAAHVILLVG-ELEDILLRVEQVQPNGNGEEEETK--VDRSRQTYGPKEST------GEDPVVERLMRKQEELVRTGNNEMIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMR----FLRQTNIEAQSVGIELRNQVETLQKEEKS---QGLPRATEQRIRRGLALLVEKDLRKQVATLTQS------------------------------------------HSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESVRQKHLNYVRRLGNVVQRFHGSSCRSSCNFVLDPK 1041
MK ++ W RRSSK SKSK PP AQA+E P Q ++ + G E + R Q N EEEE K VD S + YG KE GE+ RL+RKQE L+R + E I++L A+LL+ +L+R+E+MA RLKAVEDEKAALEVA ERA TAMQ+ TM LR+ IEAQ + EL QVE L+KE+ G + +++IR GLA LVEKDLR QVATL QS +QADEIR+L Q+Q L+ + ++T +QG +AT ++LG+ HPDC RL ADFYP W P VAIV +FRITVP VR KHL+YVR GNVVQRFHG+SCRS+CNF+LDPK
Sbjct: 1 MKTLHKLTLWSRRSSKSSKSKIPPSVEPAQADE---TPVQVAHNTILFVDGREGSNNFSRFGQTLAYRNQEEEEEKTTVDSSHRAYGAKEFVSDEECRGEECPNVRLLRKQE-LLRKSDQEEIQKLRATLLQQKYDLQRNEKMALARLKAVEDEKAALEVALGAERANTAMQQITMNNMKNTLREKTIEAQLLESELGEQVEMLKKEKSKAAENGQRQTKQEKIRSGLARLVEKDLRTQVATLEQSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLAQVQDLQRSEERHIDSVVTFGRTQGFNATASALGDGHPDCPRLHADFYPFWEAPVEVAIVGIFRITVPAGVRDKHLSYVRSHGNVVQRFHGTSCRSACNFILDPK 401
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: D7FLK2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK2_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.440e-61 Identity = 144/302 (47.68%), Postives = 178/302 (58.94%), Query Frame = 1
Query: 283 VERLMRKQEELVRTGNNEMIEELHASLLKLHDNLRRSEEMAAVRLKAVEDEKAALEVANREERAKTAMQEKTMRF----LRQTNIEAQSVGIELRNQVETLQKEEKS---QGLPRATEQRIRRGLALLVEKDLRKQVATLTQSHSE------------------------------------------QADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESVRQKHLNYVRRLGNVVQRFHGSSCRSSCNFVLDPK 1041
VE +R Q E ++ ++ +EL A+LL+ +L RSE+MA RLK VEDEKAALEVA ERA AMQ+KT+ + LR+ NIEAQ + EL QVETL+KE+ G + E +IR GLA LVEKDLRKQVATL QS E QADEIR+L QLQ L+ N ++T +QG +AT ++LG+ HPDC RL A FYP W GVA+V +FRITVP VR KHL+YVR GNVVQ FHG+SCRS+CNF+LDPK
Sbjct: 47 VEMELRSQVETLKQEKSQAEKELRATLLQWKYDLERSEKMAVDRLKVVEDEKAALEVALGAERANMAMQQKTINYMKNTLREKNIEAQLLESELGEQVETLKKEKSKAAEDGQRQTKEDKIRNGLARLVEKDLRKQVATLKQSIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQQADEIRNLLVQLQDLQRNEEQHIDSVVTFGRTQGFNATASALGDGHPDCPRLHAKFYPRWEASVGVAVVGIFRITVPAGVRGKHLSYVRSHGNVVQCFHGTSCRSACNFILDPK 348
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Match: A0A6H5JCZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 5.920e-39 Identity = 102/177 (57.63%), Postives = 125/177 (70.62%), Query Frame = 1
Query: 421 AVEDEKAALEVANREERAKTAMQEKTMRFLRQTNIEAQSVGIELRNQVETLQKEEKSQ----GLPRATEQRIRRGLALLVEKDLRKQVATLTQSHSEQADEIRSLATQLQGLEVNGVPLTGGLITVLSSQGASATFTSLGNAHPDCSRLCADFYPGWVVPGGVAIVRMFRITVPESV 939
AV DEK ALEVA ERA TAMQ+KTM LR+ +IEAQSV +ELR+QVE L KE+ SQ G +A E++IR G+A L+EKDLRKQVATL QS +QADEI L TQ+ + N P G + T +G++AT ++LG+ HPDC RL ADFYPGW P GVAIV +FRITV S+
Sbjct: 710 AVADEKDALEVALGAERANTAMQQKTMYTLREESIEAQSVEVELRDQVEML-KEKMSQEAEIGRRQAKEEKIRSGVARLIEKDLRKQVATLEQSRMQQADEIGRLLTQV--FQQNEEPHIGSVATFGRGKGSNATASALGDDHPDCPRLHADFYPGWEAPVGVAIVGIFRITVCTSL 883 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16532.4702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16532.4702.1 >prot_Ecto-sp13_S_contig16532.4702.1 ID=prot_Ecto-sp13_S_contig16532.4702.1|Name=mRNA_Ecto-sp13_S_contig16532.4702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp MKAWQRINHWRRRSSKWSKSKNPPPEGSAQAEEETSRPAQAGAAHVILLVback to top mRNA from alignment at Ecto-sp13_S_contig16532:1473..3536+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16532.4702.1 ID=mRNA_Ecto-sp13_S_contig16532.4702.1|Name=mRNA_Ecto-sp13_S_contig16532.4702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2064bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16532:1473..3536+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16532:1473..3536+ >mRNA_Ecto-sp13_S_contig16532.4702.1 ID=mRNA_Ecto-sp13_S_contig16532.4702.1|Name=mRNA_Ecto-sp13_S_contig16532.4702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1041bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16532:1473..3536+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |