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Homology
BLAST of mRNA_Ecto-sp13_S_contig16531.4701.1 vs. uniprot
Match: D7G0P2_ECTSI (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI) HSP 1 Score: 491 bits (1263), Expect = 3.060e-170 Identity = 287/310 (92.58%), Postives = 291/310 (93.87%), Query Frame = 1
Query: 1 QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQISFPRQDLDTIVSILAGALTLPGGSXXXXXXXXXXXXXXXXXXXXXXXAGVSAAFARDFNAVTRQTLGGAKNGVTSANXXXXXXXXXSGAQRCASSALPDLKELAASGRSVGWFLRLASTAVGLLRDDEMGVTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRWQRQ 930
QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI FPRQ LDTIVSILAGALTLPGG+ XXXXXXXXXXXXXXX GVSAAFARDFNAVTRQTLGGAKNGVTS XXXXXXXXX QR ASSALPDLK+LAASGRSVGW LRLASTAVGLLRDDE GVTRRALARAGEMLAPDSH+LALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRA+IFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRWQRQ
Sbjct: 206 QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQALDTIVSILAGALTLPGGNDXXXXXXXXXXXXXXX--------GVSAAFARDFNAVTRQTLGGAKNGVTSXXXXXXXXXXXXXXQRSASSALPDLKDLAASGRSVGWLLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRAVIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRWQRQ 507
BLAST of mRNA_Ecto-sp13_S_contig16531.4701.1 vs. uniprot
Match: A0A6H5JJU9_9PHAE (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE) HSP 1 Score: 471 bits (1213), Expect = 4.610e-162 Identity = 288/311 (92.60%), Postives = 289/311 (92.93%), Query Frame = 1
Query: 1 QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQISFPRQDLDTIVSILAGALTLPGGSXXXXXXXXXXXXXXXXXXXXXXXAGVSAAFARDFNAVTRQTLGGAKNGVTSANXXXXXXXXXSG-AQRCASSALPDLKELAASGRSVGWFLRLASTAVGLLRDDEMGVTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRWQRQ 930
QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI FP QDLDTIVSILAGALTLPGGS XXXXXXXXXXXXXXXXXXXXXX AR+FNAVTRQTLGGAKNG XXXXXXXXX AQR ASSALPDLKELAASGRSVGWFLRLASTAVGLLRDDE GVTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFE VFREYGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVI APTNVARWCKRWQRQ
Sbjct: 244 QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPGQDLDTIVSILAGALTLPGGSNXXXXXXXXXXXXXXXXXXXXXXX------AREFNAVTRQTLGGAKNGXXXXXXXXXXXXXXXXXAQRSASSALPDLKELAASGRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFETVFREYGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVINAPTNVARWCKRWQRQ 548
BLAST of mRNA_Ecto-sp13_S_contig16531.4701.1 vs. uniprot
Match: A0A6H5K6K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K5_9PHAE) HSP 1 Score: 108 bits (269), Expect = 8.580e-25 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 1
Query: 766 RSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRWQRQ 930
+S E GGGREAHPVLHCRFRSHFDI QVERALEKNVIAAPTNVARWCKRWQRQ
Sbjct: 138 QSLETLNGGGREAHPVLHCRFRSHFDIGQVERALEKNVIAAPTNVARWCKRWQRQ 192
BLAST of mRNA_Ecto-sp13_S_contig16531.4701.1 vs. uniprot
Match: A0A835Z3B3_9STRA (Origin recognition complex subunit 4 C-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 8.850e-11 Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 1
Query: 496 VTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRAMIFKAFSQLVEQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNVARWCKRW 921
+T A+ A MLAPD A++SL Q LVLVAM+R+ERR +K +F V+ EY S R++R I AF+QL++ G + G GGG L D + + AL+ + P + +WC +W
Sbjct: 344 LTAAAVRAAAHMLAPDHELEAVQSLPQLQLLVLVAMLRMERR--RKRAYTFAGVYAEYESLGARQGLGAARYTRDTIAHAFAQLLQAGLITPVRSGGGGGGAP---LQAIVSLAVDPDALSEALKDGTVECPMAIVQWCTQW 480
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 491.5 |
| Seed ortholog evalue | 2.9e-136 |
| Seed eggNOG ortholog | 2880.D7G0P2 |
| Preferred name | ORC4 |
| Model size | 933 |
| KEGG ko | ko:K02606 |
| KEGG Pathway | ko04110,ko04111,ko04113,map04110,map04111,map04113 |
| KEGG Module | M00284 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000082,GO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000808,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006267,GO:0006270,GO:0006325,GO:0006342,GO:0006355,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009743,GO:0009744,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0034285,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042221,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043388,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051101,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1901700,GO:1902292,GO:1902299,GO:1902315,GO:1902595,GO:1902597,GO:1902679,GO:1902969,GO:1902975,GO:1903047,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 |
| Exons | 5 |
| EggNOG free text desc. | DNA replication origin binding |
| EggNOG OGs | KOG2228@1,KOG2228@2759 |
| Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
| Ec32 ortholog | Ec-14_001730.1 |
| Cds size | 933 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03032 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462868.977698-CDS-Ecto-sp13_S_contig16531:448..596 | 1681462868.977698-CDS-Ecto-sp13_S_contig16531:448..596 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig16531 449..596 - |
| 1681462868.9887056-CDS-Ecto-sp13_S_contig16531:1143..1263 | 1681462868.9887056-CDS-Ecto-sp13_S_contig16531:1143..1263 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig16531 1144..1263 - |
| 1681462869.001431-CDS-Ecto-sp13_S_contig16531:1517..1600 | 1681462869.001431-CDS-Ecto-sp13_S_contig16531:1517..1600 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig16531 1518..1600 - |
| 1681462869.0144882-CDS-Ecto-sp13_S_contig16531:2060..2540 | 1681462869.0144882-CDS-Ecto-sp13_S_contig16531:2060..2540 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig16531 2061..2540 - |
| 1681462869.0239704-CDS-Ecto-sp13_S_contig16531:2874..2976 | 1681462869.0239704-CDS-Ecto-sp13_S_contig16531:2874..2976 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig16531 2875..2976 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16531.4701.1 >prot_Ecto-sp13_S_contig16531.4701.1 ID=prot_Ecto-sp13_S_contig16531.4701.1|Name=mRNA_Ecto-sp13_S_contig16531.4701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
QDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQISFPRQDLDTIVSILA GALTLPGGSDDDDDDDDDDDDDEEGSESPPPPAGVSAAFARDFNAVTRQT LGGAKNGVTSANNNSGGGGGGSGAQRCASSALPDLKELAASGRSVGWFLR LASTAVGLLRDDEMGVTRRALARAGEMLAPDSHALALRSLSVTQALVLVA MVRLERRGRKKDGCSFEAVFREYGSYLREFRTCHLRFSRAMIFKAFSQLV EQGALRSAEPGTGGGREAHPVLHCRFRSHFDIEQVERALEKNVIAAPTNV ARWCKRWQRQ* back to topmRNA from alignment at Ecto-sp13_S_contig16531:449..2976- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig16531.4701.1 ID=mRNA_Ecto-sp13_S_contig16531.4701.1|Name=mRNA_Ecto-sp13_S_contig16531.4701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16531:449..2976- (Ectocarpus species13 EcNAP12_S_4_19m) CAGGATAAGACCATTTGCGCGGCTGTGGTGGGCCTCTCGGTCAACCTCAA
CGTCCTGGACGTGGCAGAGAAGAGAGTCAAGTCCAGATTCTCCTTCCGGC
AGGTCAGAGGCACGACAGATAGGATACGGAGATTGGATCAGGGGGGGGGT
GCCGAAGGGAGAACGGACGGAGGGGGGGGGGAGGAGTGGAAGGTTTGGCA
GAGAGTAAAAAGGAGTGATAATACGAGAGGGATAAACAAGCACGGTGTTT
GTACCGAAAGGACAAGGGAGGGGGAGTGGAAGGTTTTCGAAGGGAGAAAG
GGGGAGAGAAAGAAGTATAGAGGTCAAAAGAGGGTTGGACAGGGTGTAGA
GAGTAAGCCTTAGCACAACCGGGTCATGCTACTGGTCTACCCCAACCCAA
CGTCCACTCCCCAACACCCCACCGCGATACCAACAGATAAGCTTCCCGCG
CCAGGACCTCGACACCATCGTTTCGATCCTTGCGGGCGCTCTCACGTTAC
CCGGAGGAAGCGACGACGACGACGATGACGACGACGACGATGACGACGAC
GAAGAGGGCAGCGAATCTCCCCCGCCACCCGCCGGCGTCTCCGCCGCTTT
CGCCCGAGACTTCAACGCCGTCACCCGGCAGACCCTCGGCGGCGCCAAGA
ACGGCGTCACCTCAGCCAACAACAACAGCGGCGGCGGTGGCGGCGGCAGC
GGCGCGCAGCGATGCGCTTCGTCGGCCCTGCCGGATCTGAAGGAACTCGC
GGCATCGGGGAGGAGCGTGGGGTGGTTCTTGAGGCTGGCGTCCACGGCGG
TGGGGCTGCTTAGGGACGACGAGATGGGGGTGACGCGGAGGGCGCTGGCG
AGGGCGGGGGAGATGCTCGCGCCCGACTCGCACGCTCTGGCGCTCCGGAG
CTTGTCGGTGACCCAGGTGGGTGCGTGGAGTGGGGTTGGAGGGAGGGAGG
GAAGGAGGGATTTGCGGCTTTTTGTCAGGACGGAGGGAGAACGGGAGAGG
AGCGGACGGACGCAGGGACGCAGGTAGAGAGGGGAGGTTGTCAGCTGCCG
CCTGAATGCCCCCCACATATTTTTTTTGTCGCCCTGCTGCTGCCGCTGCT
GCTGTAGTCGTTGCGGTATTGTTGTCGCCATTGTGATGATCGTGTTGTGT
TGTTGTTGTGGCATCTAGACGATTGTTTTCTCGCGTGGTTACGACGGCGT
TCGCGCGCTCTCTCTAACGAGAGCACCTGCTGCTGACAATCCTAAGATGG
CGTCGCCGCAAGCTTCGCTTACACCCGCCCGCGTGTTCGTACACGCAATG
ATTTCGCGCATCGCCCACTCTTTGAGACGCACTTCTCCTTTGATTTCGTC
GAAAAAACTCTACCACCCTACGGCAGGCCCTTGTGCTGGTTGCGATGGTG
AGGTTGGAGCGTAGGGGACGCAAGAAGGACGGCTGTTCGTTTGAGGCCGT
TTTTCGAGAGTGAGTGGTGCCATGTGCTGTCCAAATAACTTTACGTGCTC
GTTGTGTTTTCCATTCTTCTAGTGGGGCGGTGTGCTAGTTGATCCTAGCT
TTTCCCCGTTCATGCCTGTTCCCCCGTCTTGCAACATCAAGTGCACTAGG
TTAACGCTAAGCTGTTGCCTGGGTACACTGCACACTCGACGAATCTGTAG
TACACCATCTGAGACCATATGCCCACCCACCCCCACCCCTTGCCCCCGCC
TCACCCCCAAAAGGTACGGGTCGTACCTGCGGGAGTTTCGAACGTGCCAC
TTACGCTTCTCTCGTGCCATGATCTTTAAAGCCTTCAGCCAGCTGGTGGA
GCAAGGCGCTCTGCGATCGGCAGAGCCTGGAACGTGAGAGAGAGAGAGAG
ACGATCTTCTTCTTGACTTCTTGACGTCGGGGGGGTGGGGGTGGGTGGGC
AAGGATGCGATTGCTGACGAAATAAAATGTAGTACATTGCAAAAAACGTA
CATACTACAGCGTATGACCGAGGGGGCACCGTAGGTGGAGTTCTTCCCCG
GTAGGTAGACACTCCCCCGGCCGCACACGGAAGAAGCCGTACCCCCTTCT
TCCAGACCCCCCCCCACTTTCTCGAGGCCCAGACAATTGTTTCACTCTTC
GCGGCTTATCTTTCCTCGCGGAAATTACAACTTTAGTCAAAGGGTAGGAA
CGGTGCTTCTGGGTAAAGAAACTTACGCCGAGTGGGCACGCCCCAGGCCT
CGGGCATCAAGGATCAGAGACTTTGACTTTGAAGTCCGCCCGCATCGTTA
CTTAACAAATCACGGTGCTATGTACATCAAGTCTCAGTCGACCGGATTTG
AGGATATTTTGTATATTGGTTATGGTCGTGCATGAAAGCCAACCCCCCCC
TCTCCCCGTTTGCCGTTGTTTTTTTGAAAGCGGTGGCGGGCGCGAGGCGC
ACCCCGTGCTCCACTGCCGGTTCCGGAGCCATTTCGACATCGAGCAGGTG
GAGCGCGCGCTGGAGAAGAACGTCATTGCCGCCCCCACCAACGTGGCTCG
GTGGTGCAAGAGGTGGCAGAGGCAGTAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig16531:449..2976- >mRNA_Ecto-sp13_S_contig16531.4701.1 ID=mRNA_Ecto-sp13_S_contig16531.4701.1|Name=mRNA_Ecto-sp13_S_contig16531.4701.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16531:449..2976- (Ectocarpus species13 EcNAP12_S_4_19m) CAGGATAAGACCATTTGCGCGGCTGTGGTGGGCCTCTCGGTCAACCTCAA CGTCCTGGACGTGGCAGAGAAGAGAGTCAAGTCCAGATTCTCCTTCCGGC AGATAAGCTTCCCGCGCCAGGACCTCGACACCATCGTTTCGATCCTTGCG GGCGCTCTCACGTTACCCGGAGGAAGCGACGACGACGACGATGACGACGA CGACGATGACGACGACGAAGAGGGCAGCGAATCTCCCCCGCCACCCGCCG GCGTCTCCGCCGCTTTCGCCCGAGACTTCAACGCCGTCACCCGGCAGACC CTCGGCGGCGCCAAGAACGGCGTCACCTCAGCCAACAACAACAGCGGCGG CGGTGGCGGCGGCAGCGGCGCGCAGCGATGCGCTTCGTCGGCCCTGCCGG ATCTGAAGGAACTCGCGGCATCGGGGAGGAGCGTGGGGTGGTTCTTGAGG CTGGCGTCCACGGCGGTGGGGCTGCTTAGGGACGACGAGATGGGGGTGAC GCGGAGGGCGCTGGCGAGGGCGGGGGAGATGCTCGCGCCCGACTCGCACG CTCTGGCGCTCCGGAGCTTGTCGGTGACCCAGGCCCTTGTGCTGGTTGCG ATGGTGAGGTTGGAGCGTAGGGGACGCAAGAAGGACGGCTGTTCGTTTGA GGCCGTTTTTCGAGAGTACGGGTCGTACCTGCGGGAGTTTCGAACGTGCC ACTTACGCTTCTCTCGTGCCATGATCTTTAAAGCCTTCAGCCAGCTGGTG GAGCAAGGCGCTCTGCGATCGGCAGAGCCTGGAACCGGTGGCGGGCGCGA GGCGCACCCCGTGCTCCACTGCCGGTTCCGGAGCCATTTCGACATCGAGC AGGTGGAGCGCGCGCTGGAGAAGAACGTCATTGCCGCCCCCACCAACGTG GCTCGGTGGTGCAAGAGGTGGCAGAGGCAGTAG back to top
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