prot_Ecto-sp13_S_contig16526.4698.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16526.4698.1
Unique Nameprot_Ecto-sp13_S_contig16526.4698.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16526.4698.1 vs. uniprot
Match: A0A6H5KLN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN4_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.750e-37
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0 
Query:    1 MAALRTGRHAAALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSCVLGRTADERTRLCSKIAPKPTRPGEQP 77
            MAALR GRH+AALLLL+ALAVPTAAAHTFRYAWVIAAALRL+ELCPCPSCVLGRTADER RLCSKIAPKPTRPGEQP
Sbjct:  585 MAALRAGRHSAALLLLKALAVPTAAAHTFRYAWVIAAALRLSELCPCPSCVLGRTADERARLCSKIAPKPTRPGEQP 661
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BLAST of mRNA_Ecto-sp13_S_contig16526.4698.1 vs. uniprot
Match: D7G483_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G483_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.780e-37
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0 
Query:    1 MAALRTGRHAAALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSCVLGRTADERTRLCSKIAPKPTRPGEQ 76
            MAALR GRH+AALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSCVLGRTADER RLCSKIAPKPTRPGEQ
Sbjct: 1579 MAALRAGRHSAALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSCVLGRTADERARLCSKIAPKPTRPGEQ 1654
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16526.4698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLN4_9PHAE2.750e-3793.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G483_ECTSI2.780e-3796.05Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..77
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.853
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16526contigEcto-sp13_S_contig16526:889..1717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16526.4698.1mRNA_Ecto-sp13_S_contig16526.4698.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16526 875..1717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16526.4698.1 ID=prot_Ecto-sp13_S_contig16526.4698.1|Name=mRNA_Ecto-sp13_S_contig16526.4698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MAALRTGRHAAALLLLQALAVPTAAAHTFRYAWVIAAALRLAELCPCPSC
VLGRTADERTRLCSKIAPKPTRPGEQP
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