prot_Ecto-sp13_S_contig16498.4680.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16498.4680.1
Unique Nameprot_Ecto-sp13_S_contig16498.4680.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16498.4680.1 vs. uniprot
Match: D7FTF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF4_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.030e-81
Identity = 153/187 (81.82%), Postives = 164/187 (87.70%), Query Frame = 0 
Query:    1 LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRAEEIEGLVDQMNLKLSLLGASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG----------EVARK--GRLVTVAMSARAEVQTAYQDMKQSTEDL 175
            LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRA EIEGLVDQMNLKLSLL ASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG          +VAR+  G   ++A + + E++TA Q ++Q+ EDL
Sbjct:  255 LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKGARILCEKQRDDVARRLEGVQGSLASAEQRELETAEQ-LRQTQEDL 440
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BLAST of mRNA_Ecto-sp13_S_contig16498.4680.1 vs. uniprot
Match: A0A6H5JEQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ6_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 4.020e-80
Identity = 150/187 (80.21%), Postives = 163/187 (87.17%), Query Frame = 0 
Query:    1 LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRAEEIEGLVDQMNLKLSLLGASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG----------EVARKGRLVTVAMSA--RAEVQTAYQDMKQSTEDL 175
            LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQS AQSNKEQHARELAWLTPKVAAAESRA EIEGLVDQMNLKLSLL ASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKG          +VAR+  +   ++++  + E++TA Q ++Q+ EDL
Sbjct:  264 LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSHAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKGARILCEKQRDDVARRLEVAQGSLTSAEQRELETAEQ-LRQTQEDL 449
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16498.4680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTF4_ECTSI1.030e-8181.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEQ6_9PHAE4.020e-8080.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 158..178
NoneNo IPR availableCOILSCoilCoilcoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16498contigEcto-sp13_S_contig16498:480..2709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16498.4680.1mRNA_Ecto-sp13_S_contig16498.4680.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16498 480..2710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16498.4680.1 ID=prot_Ecto-sp13_S_contig16498.4680.1|Name=mRNA_Ecto-sp13_S_contig16498.4680.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
LENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQ
AQSNKEQHARELAWLTPKVAAAESRAEEIEGLVDQMNLKLSLLGASHRKA
SEEVADLKIQLSLAKADGPGAKLSDLQGEAAECRNVIRKLKGEVARKGRL
VTVAMSARAEVQTAYQDMKQSTEDLEKRFRETE
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