mRNA_Ecto-sp13_S_contig1649.4676.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1649.4676.1
Unique NamemRNA_Ecto-sp13_S_contig1649.4676.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: D7FYI0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI0_ECTSI)

HSP 1 Score: 1026 bits (2653), Expect = 0.000e+0
Identity = 539/620 (86.94%), Postives = 564/620 (90.97%), Query Frame = 1
Query:   91 IDSSMRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPILTNIATGVRARWSTKKKEEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSADDSESTVREEDVWEEGNSMPDAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTNECSKKGKFSCGGSKGSPSIGEENRDGEDERGGTRHGREGEERGIKRGQGVESQPKHASIRQEEGESSLKENNQDSNSFDEASNRRPFTPTPPLFKSSFGNQRSETGRPLGSVANWFGRWLVHAHIGGSKSRRADDSDIDRDGRISRVKPAKVEASTQLEPSPPAGNDMSKAGRESRSAKRLPRRMWAPGLRGWVRAGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG 1950
            + S+MRTAES+SLDTGNVAPAVPSALS+SQAEQRPQAIA+NNSVTT DGQSDPILTNIATGVRARWSTK+ EEAAPRKPSR RLQ+ISKQCLPRGGTYL+T+IGPIQ           VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSV+TEIRIRALMQETLLGPK+VDAS+DF ESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSD SHE A RLSADDSES V EEDVWEE N MP+AIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENT+ECSKKG FS  GSK SP I EENR GEDERGGTR+GREGE RGI+RGQG ESQPKHA IRQ  G+SS K  NQDS S DEA +RR FTPT P FK SFGNQRSE GRPLGSVANWFGRWLVHAHIG +KSR ADD  IDRDGRISRVK A+VEA+TQLEP P AGN++SKAGRESR+AKR PRR+WAPGL GWVR GIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG
Sbjct:    1 MGSNMRTAESSSLDTGNVAPAVPSALSASQAEQRPQAIAVNNSVTTIDGQSDPILTNIATGVRARWSTKRNEEAAPRKPSRLRLQRISKQCLPRGGTYLSTVIGPIQ-----------VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVDTEIRIRALMQETLLGPKNVDASVDFHESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDPSHENAARLSADDSESMVSEEDVWEEENPMPNAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTDECSKKGNFSSRGSKESPIIREENRQGEDERGGTRNGREGEGRGIERGQGAESQPKHAPIRQV-GDSSSKGKNQDSTSSDEAPDRRHFTPTRPSFKPSFGNQRSEVGRPLGSVANWFGRWLVHAHIGENKSRSADDGSIDRDGRISRVKSAEVEANTQLEPPPAAGNNVSKAGRESRNAKRTPRRIWAPGLNGWVRTGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG 608          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A6H5KVN3_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN3_9PHAE)

HSP 1 Score: 995 bits (2572), Expect = 0.000e+0
Identity = 530/621 (85.35%), Postives = 555/621 (89.37%), Query Frame = 1
Query:   91 IDSSMRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPILTNIATGVRARWSTKKKEEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSADDSESTVREEDVWEEGNSMPDAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTNECSKKGKFSCGGSKGSPSIGEENRDGEDERGGTRHGREGEERGIKRGQGVESQPKHASIRQEEGESSLKENNQDSNSFDEASNRRPFTPTPPLFKSSFGNQRSETGRPLGSVANWFGRWLVHAHIGGSKSRRADDSDIDRDGRISRVKPAKVEASTQLEPSPPAGNDMSKAGRESRSAKRLPRRMWAPGLRGWVRAGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNGR 1953
            + SSMRT ES+SL TGNVAPAVPSALSSSQAEQRPQAIAINNSVTT DGQS+PILTNIATGVRARWST++KE AAP KPS PRL+KISKQCLPRGGTYLAT+IGPIQ           VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETE+RIRALMQETLLGP+DVDASIDFD+SVPVENRPDIGKELSYFR FNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSN DGGQYIFTEHQKGGSD SHE A RLSA DSEST REEDVWEE NSMP+AIDVR AGDTNDTLR TSLRHESIAKHMSV LTEG SE+E+++ C KKGK S  GSKGSPSI EENR+GEDERGGTR+GREGE RGI RGQG ESQPK+ASIR+    SS K  N+ S SFDEA +R PFTPT PL KSSFGNQRSE GRPLGSVANWFGRWLVHAHIGGSKSR ADD DIDRDGRISRVK AKVEASTQ E +PPAGNDMSKAGRESRSA R  RRMWAPGL GWVRAGIP LNGFLP+RT EVS+TCPLPT LPSQP+Q EDEFIAPTFGTTVLGNSHGFDPNGR
Sbjct:    1 MGSSMRTVESSSLGTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTIDGQSNPILTNIATGVRARWSTERKEAAAPGKPSIPRLRKISKQCLPRGGTYLATVIGPIQ-----------VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEVRIRALMQETLLGPEDVDASIDFDDSVPVENRPDIGKELSYFRTFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNTDGGQYIFTEHQKGGSDPSHENAPRLSAGDSESTDREEDVWEEENSMPNAIDVRAAGDTNDTLRHTSLRHESIAKHMSVQLTEGGSEEESSDTCLKKGKKSSRGSKGSPSIREENREGEDERGGTRNGREGEGRGIGRGQGAESQPKYASIRRV-CVSSPKGKNKGSTSFDEAPDRHPFTPTRPLIKSSFGNQRSEMGRPLGSVANWFGRWLVHAHIGGSKSRSADDGDIDRDGRISRVKSAKVEASTQFESTPPAGNDMSKAGRESRSAIRTRRRMWAPGLSGWVRAGIPCLNGFLPMRTEEVSITCPLPTTLPSQPKQREDEFIAPTFGTTVLGNSHGFDPNGR 609          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.780e-50
Identity = 99/199 (49.75%), Postives = 135/199 (67.84%), Query Frame = 1
Query:  349 ISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTE 945
            I    LPRGG Y+ T  GP+Q           +GIPPETIKDSMALGL +PQYFV+PP+ F R LG+ LG+NVAEFEFPAYYNFFL+  T+KL+V S+ETE R+R ++QETL GP  +D  +DF ++VP   RP++  E  YFR F+GK L++D L+ F+H ++ G+V ++G     GA   I +    A+GG+++  E
Sbjct:   51 IKVTALPRGGIYVPTAAGPLQ-----------IGIPPETIKDSMALGLAMPQYFVMPPDSFHRELGSGLGINVAEFEFPAYYNFFLRKRTIKLVVGSLETERRLRIVLQETLFGPVHIDPDVDFSQAVPRAARPNLAAESDYFRMFDGKVLTLDSLVQFVHFDAAGVVTIEGEGDYRGAR--IELRHRRANGGEFVVDE 236          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: W4GLH8_9STRA (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLH8_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.750e-43
Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 1
Query:  364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGG 960
            LPRGG  ++T IGP+Q            GIPPETIKDSM LGLPVP YFVVP E F +TLG+++GVNVAEFEFPAY NFF K  +V LIV S + E RIR + QETL GP+ +D   DF  S P  + PD+  EL YFR F    +S+D+L+ F H N+  +  +   D        ++I   N   G+++FT+H   G
Sbjct:   17 LPRGGCIVSTSIGPVQ-----------YGIPPETIKDSMVLGLPVPMYFVVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQSVNLIVASQDAEDRIRRVFQETLFGPQQIDIEHDFPVSAPPSSYPDLPAELGYFRKFGNTLISLDMLLKFTHFNAQNVATITAGDNK------VTIQKLN---GEFVFTDHTTNG 195          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A1V9ZS88_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS88_9STRA)

HSP 1 Score: 176 bits (445), Expect = 6.500e-43
Identity = 90/165 (54.55%), Postives = 110/165 (66.67%), Query Frame = 1
Query:  364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVIL 858
            LPRGGT ++T IGPIQ            GIPPETIKDSMALGLPVP YF+VP E F +TLG+++GVNVAEFEFPAY NFF K   V LIV S E E RIR + QETL GP  +D  +DF   VP E  P++  EL YFR F    +++++L+ F H N +G+  L
Sbjct:   16 LPRGGTIVSTSIGPIQ-----------YGIPPETIKDSMALGLPVPMYFIVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQCVNLIVASQEVEDRIRRVFQETLFGPATIDTKMDFPHQVPAELHPNLPAELGYFRKFGNTLITLEMLLKFTHFNDNGVATL 169          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A024UV41_9STRA (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV41_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.950e-42
Identity = 99/212 (46.70%), Postives = 128/212 (60.38%), Query Frame = 1
Query:  364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSA 999
            LPRGG  ++T IGP+Q            GIPPETIKDSMA+GLPVP YFVVP E F +TLG+++GVNVAEFEFPAY NFF K  +V LIV S E E RIR + QETL GP+ +D   DF  + P    PD+  EL YFR F    +++D+L+ F H N+  +  L         D  ++I   N   G+++ T+H   G+ +  E  VRL A
Sbjct:   16 LPRGGCIVSTSIGPVQ-----------YGIPPETIKDSMAMGLPVPMYFVVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQSVNLIVASQEVEDRIRRVFQETLFGPQQIDIQHDFPATAPTSTYPDLPAELGYFRKFGNTLITLDMLLKFTHFNAQNVATLTA------GDHKVTIQKLN---GEFVVTDHTTNGT-ACIEDFVRLPA 206          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A1W0ABB6_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABB6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 9.680e-41
Identity = 87/172 (50.58%), Postives = 111/172 (64.53%), Query Frame = 1
Query:  343 QKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVIL 858
            +K+    LPRGGT ++T IGP+Q            GIPPETIKDSMALGLPVP YF+VP E F +TLG+++GVNVAEFEFPAY NFF K   V LIV S E E RIR + QETL GP+ +D   DF  + P    P++  EL YFR F    +++++L+ F H N + +  L
Sbjct:    4 EKLKVTDLPRGGTIVSTSIGPVQ-----------YGIPPETIKDSMALGLPVPMYFIVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQCVNLIVASQEVEDRIRRVFQETLFGPQTIDVKQDFPHNAPASTYPNLEAELGYFRKFGNTLITLEMLLKFTHFNDENVATL 164          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A5D6XUJ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUJ1_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.080e-40
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = 1
Query:  304 EEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDG 846
            ++AAP++P+   L+ I    LPRGG   +T IGP+Q           +G+PPETIKDSM LGLPVP++++VP E F +TLG ++GVNVAEFEFPAY NFF K   V LIV S++ E+RIR + QETL GP  +D   DF +S P E  PD+ KEL+YFR F    +++D+L+ F H +  G
Sbjct:   42 DDAAPQEPTI--LESIK---LPRGGVVASTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKTLGANMGVNVAEFEFPAYCNFFFKRQCVNLIVTSIDVELRIRQVFQETLFGPAALDLKADFPQSTPPELYPDLHKELAYFRKFGDTLITLDMLLKFTHFDEHG 206          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A662XL74_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XL74_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.090e-40
Identity = 93/205 (45.37%), Postives = 127/205 (61.95%), Query Frame = 1
Query:  328 SRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFT 942
            +RP L+ I    LPRGG    T IGP+Q           +G+PPETIKDSM LGLPVP++++VP E F +TLG ++GVNVAEFEFPAY NFF K   V LIV S + E RIR + QETL GP+++D   DF ++ P E  PD+ +EL YFR F    +++D+L+TF H + +G  ++   D   G+     + +   DG   +FT
Sbjct:  480 ARPTLETIK---LPRGGVVACTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKTLGANMGVNVAEFEFPAYCNFFFKRQCVNLIVSSQDVEKRIRQVFQETLFGPEELDLRRDFPQATPSEQIPDLKRELEYFRKFGDTLITLDMLLTFTHFDVNGEALIRQPDAAAGSS---PVLIRKGDG---VFT 664          
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: H3GP72_PHYRM (Cyclic nucleotide-binding domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GP72_PHYRM)

HSP 1 Score: 167 bits (424), Expect = 5.300e-40
Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query:  364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDG 846
            LPRGG    T IGP+Q           +G+PPETIKDSM LGLPVP++++VP E F + LG +LGVNVAEFEFPAY NFF K   V LIV S + E RIR + QETL GP ++D   DF +S P E  PD+ KEL YFR F    +++D+L+TF H +++G
Sbjct:   22 LPRGGVVACTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKNLGANLGVNVAEFEFPAYCNFFFKRQCVNLIVTSADVETRIRQVFQETLFGPAELDLRNDFPQSTPPEQFPDLRKELEYFRKFGDTLITLDMLLTFTHFDANG 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI0_ECTSI0.000e+086.94Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KVN3_9PHAE0.000e+085.35Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A836CNA7_9STRA8.780e-5049.75Cyclic nucleotide-binding domain-containing protei... [more]
W4GLH8_9STRA5.750e-4347.74Cyclic nucleotide-binding domain-containing protei... [more]
A0A1V9ZS88_9STRA6.500e-4354.55cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Ta... [more]
A0A024UV41_9STRA1.950e-4246.70Cyclic nucleotide-binding domain-containing protei... [more]
A0A1W0ABB6_9STRA9.680e-4150.58cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Ta... [more]
A0A5D6XUJ1_9STRA3.080e-4049.72Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A662XL74_9STRA3.090e-4045.37Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3GP72_PHYRM5.300e-4052.80Cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1649contigEcto-sp13_S_contig1649:2133..6047 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1036.9
Seed ortholog evalue3.7e-300
Seed eggNOG ortholog2880.D7FYI0
Model size1953
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006195,GO:0006198,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008081,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009187,GO:0009214,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019932,GO:0019933,GO:0019934,GO:0019935,GO:0023052,GO:0032101,GO:0033036,GO:0034404,GO:0034613,GO:0034641,GO:0034654,GO:0034655,GO:0035556,GO:0040012,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046058,GO:0046434,GO:0046483,GO:0046700,GO:0047555,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0050920,GO:0050926,GO:0051179,GO:0051641,GO:0051716,GO:0055086,GO:0061118,GO:0065007,GO:0070727,GO:0071704,GO:0072521,GO:0072523,GO:0072697,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1990778
Exons4
EggNOG free text desc.Metallo-beta-lactamase superfamily
EggNOG OGs28VX6@1,2R2P1@2759
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-00_004330.1
Cds size1851
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462867.0226626-UTR-Ecto-sp13_S_contig1649:2132..22341681462867.0226626-UTR-Ecto-sp13_S_contig1649:2132..2234Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1649 2133..2234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462867.0332277-CDS-Ecto-sp13_S_contig1649:2234..25761681462867.0332277-CDS-Ecto-sp13_S_contig1649:2234..2576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1649 2235..2576 +
1681462867.049847-CDS-Ecto-sp13_S_contig1649:3559..37241681462867.049847-CDS-Ecto-sp13_S_contig1649:3559..3724Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1649 3560..3724 +
1681462867.0622978-CDS-Ecto-sp13_S_contig1649:4340..45251681462867.0622978-CDS-Ecto-sp13_S_contig1649:4340..4525Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1649 4341..4525 +
1681462867.0777109-CDS-Ecto-sp13_S_contig1649:4888..60471681462867.0777109-CDS-Ecto-sp13_S_contig1649:4888..6047Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1649 4889..6047 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1649.4676.1prot_Ecto-sp13_S_contig1649.4676.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1649 2235..6047 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1649.4676.1

>prot_Ecto-sp13_S_contig1649.4676.1 ID=prot_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=617bp
MRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPI
LTNIATGVRARWSTKKKEEAAPRKPSRPRLQKISKQCLPRGGTYLATIIG
PIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNS
LGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDV
DASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIV
ILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSAD
DSESTVREEDVWEEGNSMPDAIDVRTAGDTNDTLRPTSLRHESIAKHMSV
HLTEGDSEDENTNECSKKGKFSCGGSKGSPSIGEENRDGEDERGGTRHGR
EGEERGIKRGQGVESQPKHASIRQEEGESSLKENNQDSNSFDEASNRRPF
TPTPPLFKSSFGNQRSETGRPLGSVANWFGRWLVHAHIGGSKSRRADDSD
IDRDGRISRVKPAKVEASTQLEPSPPAGNDMSKAGRESRSAKRLPRRMWA
PGLRGWVRAGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPT
FGTTVLGNSHGFDPNGR
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mRNA from alignment at Ecto-sp13_S_contig1649:2133..6047+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1649.4676.1 ID=mRNA_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1649:2133..6047+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGATACTTGTATATTCCCGCAATTTTTCGATTCGGGCGAAGACTTCGAGG TGTCATCTGACCTTCGGCACGTTTGAACTACTTTCGCCACATTGACAGCA GCATGCGTACTGCGGAGAGTAATTCGCTTGACACGGGCAACGTCGCACCA GCAGTGCCTTCCGCTCTTTCTTCTTCTCAGGCAGAGCAGAGGCCCCAAGC AATTGCCATCAACAACTCAGTGACAACATTCGATGGGCAGTCAGACCCAA TCCTCACCAACATCGCGACGGGGGTCCGAGCTCGATGGAGTACAAAGAAA AAGGAAGAAGCGGCACCCAGAAAACCAAGCAGACCCCGTCTCCAAAAGAT TTCGAAGCAGTGCCTGCCGCGTGGCGGGACATACTTGGCAACGATCATCG GTCCCATCCAGGCGAGCTTTTCGAGCGAGTCCACTGGGTTTTTCGTTTTT CATGACGATGAAGTCAGGACAGCAACAGACCTCTTTATCTCCATCCTTCA TTTCCTACGGGGGTGTGAAGGCTGGACTGTCAGTCCCAAGCTGTAATCAC CATAGAAAAAAAGCAACGGGGAGGGAGGGGTTGAGTGAGGGACAGGTGAG AAGTGGGGAAAACGAGACTGTAGACGCAACGGCTACATACACCTGTAGGC CATGAGGGCGATAGGGTGTTGAACGCCTTCACGCCCTGTACTAGACATGA ATTGCTGTGCACCAGAGGTGACTTGGAGACCGACGTATCGTGCCACATGC TGAACCTTTGACGCCTGCACGAGACCCTTCAAACGTGGGTACATCGTTGC GTTCCACTACAGAAAGTGAGACAAGGGCCAGCGAGCTAGTACCATCCCAC CCTCGTATCACCTCGTCCAGAAGTCTCTAACCGGTTGTGGCCAAGCCATC CAACCAGAAAATGTAAATAACACTATTGCCCTCCGATCAGTACTCTGCGC TAGGGCGTCTTCAAGATGTTCTCCGGATGCTACAGTACGTGTAGTCGTAA TCAGACAATCGCCCATGATGGGCTTTTCCCACATTCGCTAGCGTGCTGAG ACGGCACGAGGGTGGCCTAGGCAGGTTTCGTATCTAGCGCCCAACCTCCC CACAAACTTCCTTGGCAGCTAGCCCTGCATCACGGATTGCGGCGTTGGTC CAATCAATAGGGTGGACTGGCCGCGTAGGTTACACGCTATCCAAGGTCGA TCCCCAACGTCCCAACCTGACCCCGGGAAGGTTGGGCACCAGTTACGATC TCCCTTGTCCACCGGTGCAAGTACACTACCCGCGGTGAACGTTGCTGTTT GGAAACAGCCGATACAAGTGTGCCTCATAGCCACTCTACAGCATGTACGC TCGAACATACACATTTCAAAAGGCTACCAGAACAGCTCGTGATCGCGTTC AGTCTCCAACGCATTTTCCACAAACAGGTAGGTATTCCCCCCGAGACCAT CAAGGATTCTATGGCTCTTGGCCTCCCCGTCCCGCAGTACTTCGTGGTGC CCCCGGAGAAGTTTTGCAGGACTTTGGGCAACAGCTTAGGTGTCAACGTC GCCGAGTTCGAGTTTCCGGCGTACTACAACTTCTTCTTAAAGGTGAAGAC CCTATGTTCTTCTGTTAAACATCTGTAGCATTGCTGTCCTAGCGCAACCG TGACACGGGGCCAAGGCAGAGGACTGATTGTTTGGACACATGAAACCACT GATTAATTTCCCTTTTGTATGCACGTCGCTGTGGCCTTCGGTAGAACTGA GTATCTACGCCGTAGGTTTCGTTGATTCCGTCGATCTACTACGTTTGCTC AACCAGAGCTTGATGAACACCTCTTGCGTCCATGACACGCCGCAGATGAC AAGGGTACCAAGGTAACTGAGTCTGAATGCCGGCTGTTCAGAACGCGGTA AAGGCATCCAATGGCCTCAGCAGATGTGCCATCCGATGGCCTCAACAGAC GGAGGGCCCAGTTGTTGTGTGATGGGCTTCGTGCGATGTTTTCAGCACTC ACTCACTCCGCAACTTATATCCACAACTCGCCAAACGCCTCCTTACTGTC CCAACTACATGTATGTAGTGTTGGCTTTGCCGGATGAAAGCGCTCCTGCC CGGCTATACGTAGCAACAGCAAATTTCAAGGTCAGCTGCAATGCCTGAAA ACCGCGCAAACAAACAAAGCAAGGCACCTCCCCTTTCTCTCCCGCTACGC AATGGTAGGGCAACACGGTGAAGCTGATCGTTGACTCCGTGGAGACCGAG ATCAGAATTCGCGCTCTGATGCAGGAGACTCTTCTAGGCCCTAAAGACGT CGACGCCTCGATCGACTTCGACGAGTCGGTGCCTGTGGAGAACAGGCCGG ACATCGGGAAGGAGCTGTCATACTTTCGGGCCTTCAACGGAAAGTGAGTT AGAAAATGGTGGGACGAGGCCAACGGAGGGAAGTGCTGTCATGGAGACCC ATGCAGCTGTAAGTGTTGGAGGGGGGGGCGACATGGTGAGCGATGAACCT TGATCATGATGATCCACCGTGTATGTAGCGCACACTCCACAGAACGTGAG TGTTTGGGTTGCGCGATACGGCACCGCCTACGTCAAAAAGTCAACTCCAC GTTGGCGCCATTCGGTGCAAAGCTGCCTATCAGCTTCAGAAACGCGTTTA TCCAGACCTCTTTATCGCCATCCTGCTTGTTGTCCATGCGCTCACCGATA TCCACCGTTCGTGCTCACGGCGCACGCCGCCCATGTGGATGGCAACACAC GGAAAGGGAGCTGTCTATCGACCTCCTGATCACCTTTATCCACCAGAACA GTGACGGCATCGTGATTCTCGACGGTGTGGACGGCACCCCTGGAGCTGAC TGGTGCATTTCGATCGCCGTCTCAAATGCCGACGGGGGACAGTACATCTT CACCGAGCACCAGAAAGGAGGCAGCGACTCCTCGCACGAGAAAGCAGTAC GGCTTAGTGCAGACGATTCCGAAAGCACGGTCAGAGAGGAGGATGTTTGG GAGGAGGGAAATTCGATGCCTGACGCCATCGACGTGAGAACAGCGGGAGA CACGAACGACACCCTCCGCCCCACCTCTCTGAGGCATGAATCGATTGCGA AGCACATGTCGGTACACCTGACCGAGGGGGACAGCGAAGACGAGAACACG AACGAGTGCTCGAAGAAGGGAAAATTTTCGTGTGGAGGCTCGAAGGGGTC ACCGAGCATCGGGGAAGAAAACAGGGATGGGGAAGACGAAAGAGGGGGAA CAAGACACGGGAGAGAAGGAGAGGAGCGGGGCATAAAAAGAGGCCAGGGA GTGGAATCGCAACCAAAGCACGCGTCGATTCGGCAAGAGGAGGGTGAGTC AAGCTTGAAGGAAAATAACCAAGACTCCAACAGCTTCGACGAGGCTTCCA ACAGGCGCCCCTTTACCCCAACACCACCATTGTTCAAATCAAGCTTTGGC AATCAGCGGTCAGAAACGGGCCGCCCCTTGGGTTCTGTCGCTAACTGGTT TGGCCGGTGGCTCGTGCACGCGCACATTGGCGGGAGCAAAAGCCGAAGAG CCGATGATAGCGATATTGACAGGGATGGCAGGATCTCGAGGGTGAAACCG GCCAAAGTCGAAGCTAGCACACAATTGGAGCCGTCGCCGCCGGCAGGAAA CGATATGTCCAAGGCTGGACGAGAGTCAAGGAGCGCGAAACGGCTACCTC GGAGGATGTGGGCACCGGGGTTACGCGGTTGGGTGCGGGCGGGAATACCG TCTCTGAACGGATTCCTCCCTGTGCGAACAGGAGAGGTTTCGATGACGTG CCCGCTACCGACGAAGTTGCCGTCTCAGCCCGAGCAGACGGAGGATGAGT TCATAGCCCCGACGTTCGGGACCACGGTGCTCGGGAACAGCCACGGGTTT GATCCGAACGGGCGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1649:2133..6047+

>mRNA_Ecto-sp13_S_contig1649.4676.1 ID=mRNA_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1851bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1649:2133..6047+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTACTGCGGAGAGTAATTCGCTTGACACGGGCAACGTCGCACCAGC
AGTGCCTTCCGCTCTTTCTTCTTCTCAGGCAGAGCAGAGGCCCCAAGCAA
TTGCCATCAACAACTCAGTGACAACATTCGATGGGCAGTCAGACCCAATC
CTCACCAACATCGCGACGGGGGTCCGAGCTCGATGGAGTACAAAGAAAAA
GGAAGAAGCGGCACCCAGAAAACCAAGCAGACCCCGTCTCCAAAAGATTT
CGAAGCAGTGCCTGCCGCGTGGCGGGACATACTTGGCAACGATCATCGGT
CCCATCCAGGCGAGCTTTTCGAGCGAGTCCACTGGGTTTTTCGTAGGTAT
TCCCCCCGAGACCATCAAGGATTCTATGGCTCTTGGCCTCCCCGTCCCGC
AGTACTTCGTGGTGCCCCCGGAGAAGTTTTGCAGGACTTTGGGCAACAGC
TTAGGTGTCAACGTCGCCGAGTTCGAGTTTCCGGCGTACTACAACTTCTT
CTTAAAGGGCAACACGGTGAAGCTGATCGTTGACTCCGTGGAGACCGAGA
TCAGAATTCGCGCTCTGATGCAGGAGACTCTTCTAGGCCCTAAAGACGTC
GACGCCTCGATCGACTTCGACGAGTCGGTGCCTGTGGAGAACAGGCCGGA
CATCGGGAAGGAGCTGTCATACTTTCGGGCCTTCAACGGAAAGGAGCTGT
CTATCGACCTCCTGATCACCTTTATCCACCAGAACAGTGACGGCATCGTG
ATTCTCGACGGTGTGGACGGCACCCCTGGAGCTGACTGGTGCATTTCGAT
CGCCGTCTCAAATGCCGACGGGGGACAGTACATCTTCACCGAGCACCAGA
AAGGAGGCAGCGACTCCTCGCACGAGAAAGCAGTACGGCTTAGTGCAGAC
GATTCCGAAAGCACGGTCAGAGAGGAGGATGTTTGGGAGGAGGGAAATTC
GATGCCTGACGCCATCGACGTGAGAACAGCGGGAGACACGAACGACACCC
TCCGCCCCACCTCTCTGAGGCATGAATCGATTGCGAAGCACATGTCGGTA
CACCTGACCGAGGGGGACAGCGAAGACGAGAACACGAACGAGTGCTCGAA
GAAGGGAAAATTTTCGTGTGGAGGCTCGAAGGGGTCACCGAGCATCGGGG
AAGAAAACAGGGATGGGGAAGACGAAAGAGGGGGAACAAGACACGGGAGA
GAAGGAGAGGAGCGGGGCATAAAAAGAGGCCAGGGAGTGGAATCGCAACC
AAAGCACGCGTCGATTCGGCAAGAGGAGGGTGAGTCAAGCTTGAAGGAAA
ATAACCAAGACTCCAACAGCTTCGACGAGGCTTCCAACAGGCGCCCCTTT
ACCCCAACACCACCATTGTTCAAATCAAGCTTTGGCAATCAGCGGTCAGA
AACGGGCCGCCCCTTGGGTTCTGTCGCTAACTGGTTTGGCCGGTGGCTCG
TGCACGCGCACATTGGCGGGAGCAAAAGCCGAAGAGCCGATGATAGCGAT
ATTGACAGGGATGGCAGGATCTCGAGGGTGAAACCGGCCAAAGTCGAAGC
TAGCACACAATTGGAGCCGTCGCCGCCGGCAGGAAACGATATGTCCAAGG
CTGGACGAGAGTCAAGGAGCGCGAAACGGCTACCTCGGAGGATGTGGGCA
CCGGGGTTACGCGGTTGGGTGCGGGCGGGAATACCGTCTCTGAACGGATT
CCTCCCTGTGCGAACAGGAGAGGTTTCGATGACGTGCCCGCTACCGACGA
AGTTGCCGTCTCAGCCCGAGCAGACGGAGGATGAGTTCATAGCCCCGACG
TTCGGGACCACGGTGCTCGGGAACAGCCACGGGTTTGATCCGAACGGGCG
A
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