prot_Ecto-sp13_S_contig16481.4673.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16481.4673.1
Unique Nameprot_Ecto-sp13_S_contig16481.4673.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: D7FSV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV7_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 1.240e-42
Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIALRRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTTRCTNCPAALDALDSIAL RPSV FVAVNIDDS AARELVSQAASEGRWTSLAH HL EDEKERAKDILGMRTVPFYV
Sbjct:   47 DFWTTRCTNCPAALDALDSIALGRPSVTFVAVNIDDSSAARELVSQAASEGRWTSLAHVHLEEDEKERAKDILGMRTVPFYV 128          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A835Z494_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z494_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.640e-17
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 MADFWTTRCTNCPAALDALDSIALR--RPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            + DFWTTRCT CP+AL+ LD+ A     P++AF++VN+DD  AAR L +     G+WT++ H  + E  +E  K+ LGM+ VPFYV
Sbjct:   33 LLDFWTTRCTRCPSALNKLDAAAAAGATPNIAFISVNLDDFEAARALTA-----GKWTNMLHVAVDEGAREILKERLGMQAVPFYV 113          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: B7FX37_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX37_PHATC)

HSP 1 Score: 74.3 bits (181), Expect = 2.120e-14
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIAL--RRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTTRCT CP ALD LD +A   R  +V FV++  D    ARE++ +  +E RW ++ H  +    KE AK++LG   VPFYV
Sbjct:   65 DFWTTRCTRCPDALDKLDDLAAAPRFANVQFVSICCDKLDGAREIIEKE-TEPRWQNVDHYFMEHQYKEEAKNVLGFSAVPFYV 147          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A1Z5KNM6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNM6_FISSO)

HSP 1 Score: 73.6 bits (179), Expect = 2.230e-14
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIALRRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTTRCTNCP ALD L  +A    +V F ++  D    ARE++ +   + RW+S+ H  +   +KE  K I G + VPFYV
Sbjct:   33 DFWTTRCTNCPDALDKLQHLAATSSNVRFASICCDSLDGAREIIGRH-DDMRWSSVHHYFMEHADKELCKQIFGFKKVPFYV 113          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A1Z5KMH1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMH1_FISSO)

HSP 1 Score: 70.9 bits (172), Expect = 2.400e-13
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIALRRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTTRCTNCP AL+ L  +A    +V F ++  D    ARE++ +   + RW+S+ H  +   +KE  K I G + VPFYV
Sbjct:   32 DFWTTRCTNCPDALNKLQHLAATSSNVRFASICCDSLDGAREIIGRH-DDMRWSSVHHYFMEHVDKELCKHIFGFKQVPFYV 112          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A7S1VHT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VHT6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.070e-13
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIALR----RPSVAFVAVNIDDS-GAARELVSQAASEGRWTSLAHAHL--AEDEKERAKDILGMRTVPFYV 84
            DFWTTRCT CPAALD L  +A+        V F ++  D S   ARE++ + + E RW  + H        +KERAK + G ++VPFYV
Sbjct:   37 DFWTTRCTRCPAALDKLQEMAMNDTYGEDDVTFASICCDASLDGAREILEEPSQERRWNKIQHYSFLFGLQDKERAKQLFGFQSVPFYV 125          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A835Z6G3_9STRA (Thioredoxin-like_fold domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6G3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.000e-12
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIA---LRRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTT+CT CPAAL  L++ A     R  V  VAVN+DD  AAR++V+         ++ H  +AE E+E  K  L M++VP+YV
Sbjct:    5 DFWTTKCTRCPAALQHLNTNARSLAARHGVKCVAVNLDDCAAARDIVAG------LNNVVHVAVAETEREHLKRFLNMKSVPYYV 83          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A7R9WXP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WXP7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.630e-12
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIAL--RRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV 84
            DFWTT+C  CP+ALD LD +A   +   V FV++  D    AR ++ +   + RW  ++H  + +++KE+AK  LG ++VPFYV
Sbjct:   46 DFWTTKCVRCPSALDKLDRMAQEPKYSDVQFVSICCDKLDGARNIIEKD-EDLRWQHVSHFFMEQEDKEKAKQQLGFKSVPFYV 128          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A7S2LEK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEK5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.130e-9
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    3 DFWTTRCTNCPAALDALDSIAL--RRPSVAFVAVNIDDSGAARELVSQAASEGRWTSLAHAHLAEDEKERAKDILG 76
            DFWTT+CT CP ALD L+ +A   R   V F ++  D    AR ++ +  S  RW  ++H  +  D KE AK ILG
Sbjct:   35 DFWTTKCTRCPDALDQLNELATDERYKKVKFASIVCDSCDGARNIIDKEDSP-RWDKVSHFFMDHDHKEEAKKILG 109          
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Match: A0A6H5JLK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.230e-8
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0
Query:   57 SLAHAHLAEDEKERAKDILGMRTVPFYV 84
            SLAH HLAEDEKERAKDILGMRTVPFYV
Sbjct:    3 SLAHVHLAEDEKERAKDILGMRTVPFYV 30          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16481.4673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FSV7_ECTSI1.240e-4293.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z494_9STRA2.640e-1747.67Thioredoxin-like_fold domain-containing protein n=... [more]
B7FX37_PHATC2.120e-1446.43Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KNM6_FISSO2.230e-1443.90Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5KMH1_FISSO2.400e-1342.68Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S1VHT6_9STRA4.070e-1342.70Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A835Z6G3_9STRA1.000e-1244.71Thioredoxin-like_fold domain-containing protein n=... [more]
A0A7R9WXP7_9STRA4.630e-1240.48Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2LEK5_9STRA1.130e-942.11Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6H5JLK1_9PHAE6.230e-896.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..84
e-value: 8.2E-8
score: 34.0
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16481contigEcto-sp13_S_contig16481:3144..3901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16481.4673.1mRNA_Ecto-sp13_S_contig16481.4673.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16481 3144..3901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16481.4673.1 ID=prot_Ecto-sp13_S_contig16481.4673.1|Name=mRNA_Ecto-sp13_S_contig16481.4673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MADFWTTRCTNCPAALDALDSIALRRPSVAFVAVNIDDSGAARELVSQAA
SEGRWTSLAHAHLAEDEKERAKDILGMRTVPFYV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf