prot_Ecto-sp13_S_contig16476.4668.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16476.4668.1
Unique Nameprot_Ecto-sp13_S_contig16476.4668.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16476.4668.1 vs. uniprot
Match: D7FNA2_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA2_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.380e-24
Identity = 49/62 (79.03%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:    1 MGDRPLARPLAPLPQPQPALKPMQMKVRLSFRTDIGGMSENQDNCFIWRHEPSGSFVIGVLD 62
            MGDRPLAR             PMQMKVRLSFRTDIGGMSENQDNCFIWRHEPSGSFVIGVLD
Sbjct:   85 MGDRPLARXXXXXXXXXXXXXPMQMKVRLSFRTDIGGMSENQDNCFIWRHEPSGSFVIGVLD 146
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BLAST of mRNA_Ecto-sp13_S_contig16476.4668.1 vs. uniprot
Match: A0A835Z8N4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.990e-16
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:   23 MQMKVRLSFRTDIGGMSENQDNCFIWRHEPSGSFVIGVLD 62
            M +KVRLSFRTDIGGMSENQD CF+WRHEPSGS VIGVLD
Sbjct:    1 MSVKVRLSFRTDIGGMSENQDECFVWRHEPSGSLVIGVLD 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16476.4668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNA2_ECTSI1.380e-2479.03PPM-type phosphatase domain-containing protein n=1... [more]
A0A835Z8N4_9STRA1.990e-1687.50Phosphatase 2C-like domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16476contigEcto-sp13_S_contig16476:147..2440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16476.4668.1mRNA_Ecto-sp13_S_contig16476.4668.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16476 147..2455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16476.4668.1 ID=prot_Ecto-sp13_S_contig16476.4668.1|Name=mRNA_Ecto-sp13_S_contig16476.4668.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MGDRPLARPLAPLPQPQPALKPMQMKVRLSFRTDIGGMSENQDNCFIWRH
EPSGSFVIGVLD
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