prot_Ecto-sp13_S_contig16470.4665.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16470.4665.1
Unique Nameprot_Ecto-sp13_S_contig16470.4665.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length170
Homology
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: D8LE41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 9.230e-111
Identity = 163/170 (95.88%), Postives = 164/170 (96.47%), Query Frame = 0
Query:    1 MSRRGLPVGAGKSRLAGFGDLGRTMTATRGILTGPFSGPFSPGSTSSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERG 170
            MSRRG P GAGKSRLAGFGDL   + ATRGILTGPFSGPFSPGSTSSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERG
Sbjct:    1 MSRRGFPGGAGKSRLAGFGDL--DLAATRGILTGPFSGPFSPGSTSSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERG 168          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A6H5JGY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY7_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.090e-108
Identity = 159/170 (93.53%), Postives = 163/170 (95.88%), Query Frame = 0
Query:    1 MSRRGLPVGAGKSRLAGFGDLGRTMTATRGILTGPFSGPFSPGSTSSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERG 170
            MSRRGLPVGAGKSRLAGFGDL  TM  TRGILTGPFSGPFSPGSTSSPK P+ALPS EKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAG VGMDLLGCIIVGTITATGGGTVRD+LLGNTPVFWMHETEYLWMCLAT+VG+FFLWSYLAERG
Sbjct:   81 MSRRGLPVGAGKSRLAGFGDLDLTMATTRGILTGPFSGPFSPGSTSSPKPPQALPSREKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGHVGMDLLGCIIVGTITATGGGTVRDMLLGNTPVFWMHETEYLWMCLATSVGVFFLWSYLAERG 250          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A836CDZ5_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 161 bits (407), Expect = 6.040e-46
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0
Query:   59 KPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERG 170
            KP  +       EDGLTRYP+  SPQGVLRGLD  GT VFA SG VTAGQ GMDLLGC IVGTITA GGGTVRD+LLGNTPVFWM ETEYL++CLA  VG FF +S LAE+G
Sbjct:    9 KPKKLPXXXXXHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQG 120          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.140e-33
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 0
Query:   70 PEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYL 166
            P + +TRYP+ RS  G+LR LDYLGT  FA  G + AG+ GMDLLGCI +G ITA GGGT RD+LLG TPVFW+ E EYL MC+ T++  F+ W +L
Sbjct:   42 PRESMTRYPSLRSAGGLLRSLDYLGTVAFATGGAICAGRAGMDLLGCIEIGVITAMGGGTTRDLLLGQTPVFWLQEVEYLAMCIVTSIATFYAWPHL 138          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A0G4I443_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I443_9ALVE)

HSP 1 Score: 127 bits (319), Expect = 7.470e-33
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0
Query:   44 STSSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSY 165
            S + P++ E   + + P      + P  DG+TRYP+  S  GVLRG DYLGT  F++SG++ A   G+D LGC +VGT TA GGGT+RD+L+GN PVFWM ETEY+WM L T+   FFL+ +
Sbjct:   28 SVTMPEKMEETETAKDPLPNPPSVHP--DGMTRYPSLSSMHGVLRGCDYLGTISFSVSGSLIAATAGLDALGCTLVGTTTAVGGGTIRDLLIGNRPVFWMDETEYVWMALITSAAAFFLFDH 147          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A6T5MA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MA33_HETAK)

HSP 1 Score: 127 bits (318), Expect = 2.160e-32
Identity = 69/124 (55.65%), Postives = 81/124 (65.32%), Query Frame = 0
Query:   46 SSPKRPEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAER 169
            S+ K P   P   KP +         DG+ R+P+  S  G+LRGLDY GT VFA+ G+VTAG  GMDLLGC IVGT+TA GGGTVRD+LLGN PVFWM ETEY+ + LA     FF W YL E 
Sbjct:   85 STNKPPAEAPPAAKPPVHT-------DGMPRFPS-TSAGGLLRGLDYFGTVVFALGGSVTAGLAGMDLLGCTIVGTVTAVGGGTVRDLLLGNFPVFWMLETEYVLLSLACAWAGFFGWDYLHEH 200          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A7S1TDV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD)

HSP 1 Score: 115 bits (288), Expect = 7.110e-29
Identity = 60/97 (61.86%), Postives = 68/97 (70.10%), Query Frame = 0
Query:   72 DGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAE 168
            DG+ R+P + S  G+LRGLDY GT VFA SGTV A   GMDLLGC +VG ITA GGGTVRD+ LGN PVFWM ETEYL +CL T+     LW  L  
Sbjct:    6 DGMPRFPNW-SAGGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTR 101          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A7S1XFC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 1.270e-28
Identity = 64/111 (57.66%), Postives = 72/111 (64.86%), Query Frame = 0
Query:   60 PALINRYIEPPE--DGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAE 168
            P L  RY       DG+ R+P + S  G+LRGLDY GT VFA SGTV A   GMDLLGC +VG ITA GGGTVRD+ LGN PVFWM ETEYL +CL T+     LW  L  
Sbjct:   82 PGLPKRYSSSSSMVDGMPRFPNW-SAGGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTR 191          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: L1K029_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K029_GUITC)

HSP 1 Score: 112 bits (281), Expect = 1.170e-27
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   55 PSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTP-----VFWMHETEYLWMCLATTVGIFFLWSYLAER 169
            PSGE  A    ++E   D L+RYP   S  G+LR  DYLGT  FA++GT+TA   GMDLLGC+++GTITA GGGT+RD+LLG+        FWM E EYLW+ + ++V  FF W++ A++
Sbjct:    5 PSGE--AAGKNHLE---DRLSRYPEL-SVGGILRAGDYLGTATFAMTGTLTAASSGMDLLGCVVIGTITAVGGGTIRDMLLGHENGKSKRAFWMDEQEYLWISILSSVMTFFWWNHAAQQ 118          
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Match: A0A7S4JJL9_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JJL9_GUITH)

HSP 1 Score: 112 bits (281), Expect = 6.910e-27
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   55 PSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTP-----VFWMHETEYLWMCLATTVGIFFLWSYLAER 169
            PSGE  A    ++E   D L+RYP   S  G+LR  DYLGT  FA++GT+TA   GMDLLGC+++GTITA GGGT+RD+LLG+        FWM E EYLW+ + ++V  FF W++ A++
Sbjct:  109 PSGE--AAGKNHLE---DRLSRYPEL-SVGGILRAGDYLGTATFAMTGTLTAASSGMDLLGCVVIGTITAVGGGTIRDMLLGHENGKSKRAFWMDEQEYLWISILSSVMTFFWWNHAAQQ 222          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16470.4665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE41_ECTSI9.230e-11195.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY7_9PHAE1.090e-10893.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CDZ5_9STRA6.040e-4671.43UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A835ZGC7_9STRA1.140e-3358.76UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A0G4I443_9ALVE7.470e-3350.00Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6T5MA33_HETAK2.160e-3255.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TDV4_9RHOD7.110e-2961.86Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XFC8_9RHOD1.270e-2857.66Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
L1K029_GUITC1.170e-2750.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4JJL9_GUITH6.910e-2750.00Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005115Uncharacterised domain UPF0126PFAMPF03458UPF0126coord: 90..163
e-value: 3.4E-24
score: 84.5
NoneNo IPR availablePANTHERPTHR30506:SF3UPF0126 INNER MEMBRANE PROTEIN YADScoord: 86..166
NoneNo IPR availablePANTHERPTHR30506INNER MEMBRANE PROTEINcoord: 86..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 148..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16470contigEcto-sp13_S_contig16470:62..3314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16470.4665.1mRNA_Ecto-sp13_S_contig16470.4665.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16470 62..3314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16470.4665.1 ID=prot_Ecto-sp13_S_contig16470.4665.1|Name=mRNA_Ecto-sp13_S_contig16470.4665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
MSRRGLPVGAGKSRLAGFGDLGRTMTATRGILTGPFSGPFSPGSTSSPKR
PEALPSGEKPALINRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAI
SGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLW
MCLATTVGIFFLWSYLAERG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005115UPF0126