mRNA_Ecto-sp13_S_contig1647.4664.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI) HSP 1 Score: 253 bits (645), Expect = 2.090e-80 Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1
Query: 4 LLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTP 402
LLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAE+VWGGMQYQLEHHLFPTIPRYKYR LVPLVRKFAE+NGIEYRATPQWEIIKDNLAL++ + +P
Sbjct: 313 LLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRQLVPLVRKFAEENGIEYRATPQWEIIKDNLALLKRVGSSP 445
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI) HSP 1 Score: 201 bits (512), Expect = 6.600e-61 Identity = 95/148 (64.19%), Postives = 119/148 (80.41%), Query Frame = 1
Query: 1 ALLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAED-------------DSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
ALLALHYC L ALVPLPVAIGH+F+GGWLTAT+VTVTHTAEE++ +D D+S+VETQF+TTRDA+ P +EH+WGGMQYQLEHHLFPT+PRYKYR LVPLV+KFAE+NG+EY++T WEII+DN+ ++ + P+
Sbjct: 257 ALLALHYCWLLALVPLPVAIGHVFVGGWLTATIVTVTHTAEEFSVKDEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPFSEHLWGGMQYQLEHHLFPTLPRYKYRDLVPLVQKFAEENGLEYKSTGSWEIIRDNIMQLKRVGEAPT 404
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.300e-60 Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1
Query: 1 ALLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAED-------------DSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
A LALHYC L ALVPLPVAIGH+F+GGWLTA +VTVTHTAEE++ +D D+S+VETQF+TTRDA+ P++EH+WGGMQYQLEHHLFPTIPRYKY LVPLV+KFAE+NG+EYR+T WEII+DN+ ++ + P+
Sbjct: 164 AFLALHYCWLLALVPLPVAIGHVFVGGWLTAIIVTVTHTAEEFSVKDEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPLSEHLWGGMQYQLEHHLFPTIPRYKYPDLVPLVKKFAEENGLEYRSTGSWEIIRDNIKQLKRVGEAPT 311
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA) HSP 1 Score: 168 bits (425), Expect = 8.670e-48 Identity = 81/133 (60.90%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
L+LHY L ALV VA+GHI LGG LTAT+VTVTHTAEE +D+ S+VE QFRTTRDA P++E+VWGGMQYQLEHHLFPT+PRYKY LVP+++++A +NG+EYR T W+II DN+ ++ +A P+
Sbjct: 295 LSLHYVALLALVGPGVALGHIMLGGLLTATIVTVTHTAEEMLMDDEMSFVEAQFRTTRDAKCTDPLSEYVWGGMQYQLEHHLFPTLPRYKYARLVPVIKQWAAENGLEYRVTGAWKIIADNVNQLKRVAAQPT 427
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A7S4PM16_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PM16_GUITH) HSP 1 Score: 145 bits (366), Expect = 1.510e-41 Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
LA HY + VP +G +FL G++TA + TVTH +EE +++ +VE QFR+TRDA+ P +E +WGGMQYQLEHHLFPT+PRY+Y LVP V+KFAE+NG+E+R TP++E++K N L +A P+
Sbjct: 26 LACHYAFMLYWVPAGTFVGALFLSGFMTAIITTVTHQSEELFFDENPEFVEGQFRSTRDAVCSNPFSEWLWGGMQYQLEHHLFPTMPRYRYPALVPHVKKFAEENGLEFRITPEFELLKMNWKLYSDIAKLPA 158
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A7S0LKA8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKA8_9EUKA) HSP 1 Score: 147 bits (370), Expect = 9.520e-41 Identity = 68/133 (51.13%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
+AL+Y +A L+P VA+GH+FL G ++AT+VTVTH +E+ +V+ Q R+TR+A+T P++E +WGGMQYQLEHHLFPT+PRYKYR L P+VR++A + G EYR +W+I+ NLA+++ +AH P+
Sbjct: 156 IALNYLWMALLLPPAVAVGHVFLAGLISATIVTVTHQSEDLFDGLQHDWVDAQLRSTRNAVTSNPLSEWLWGGMQYQLEHHLFPTMPRYKYRALSPIVRRWAAEAGAEYREDGEWQILCRNLAMLQHVAHQPA 288
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: L1IL22_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IL22_GUITC) HSP 1 Score: 145 bits (366), Expect = 1.620e-39 Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
LA HY + VP +G +FL G++TA + TVTH +EE +++ +VE QFR+TRDA+ P +E +WGGMQYQLEHHLFPT+PRY+Y LVP V+KFAE+NG+E+R TP++E++K N L +A P+
Sbjct: 246 LACHYAFMLYWVPAGTFVGALFLSGFMTAIITTVTHQSEELFFDENPEFVEGQFRSTRDAVCSNPFSEWLWGGMQYQLEHHLFPTMPRYRYPALVPHVKKFAEENGLEFRITPEFELLKMNWKLYSDIAKLPA 378
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A7S3U1W3_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U1W3_9SPIT) HSP 1 Score: 137 bits (346), Expect = 7.130e-39 Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
LAL+Y LA L P+PVAIGHIFL G ++A +VTVTH +E+ +V QFR+TR+A T P +E +WGGMQYQLEHHLFPT+PRY+YR L P ++++A + G+EYR + E++ N ++R +AH P+
Sbjct: 28 LALNYLWLACL-PVPVAIGHIFLAGLISAIIVTVTHQSEDMFDGLQHDWVLAQFRSTRNARTSNPFSEWLWGGMQYQLEHHLFPTMPRYRYRRLAPRLKQWAAEQGVEYREDSEAEVLLRNFRMLRDVAHEPA 159
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.100e-37 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYA------------AEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHTPS 405
LA +Y L+ + G + LGG L AT+VTVTH AEEY + DD S+V+ QFRTTRDAI PV+E++WGGMQYQLEHHLFP +PRYKY L P+V+++AE G++YRAT QW+II DN+ ++ + P+
Sbjct: 300 LAANYAFFLYLLGPAMFAGMVTLGGLLIATIVTVTHQAEEYLPNNDGIGLDGQESSDDPSFVDMQFRTTRDAICRDPVSEYIWGGMQYQLEHHLFPIMPRYKYSKLAPVVKEWAEKVGLDYRATDQWQIISDNINYLKKVGEAPA 444
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Match: A0A7S4DB60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB60_HETAK) HSP 1 Score: 133 bits (334), Expect = 1.310e-36 Identity = 63/131 (48.09%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 7 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEHVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEDNGIEYRATPQWEIIKDNLALVRSLAHT 399
+A HY + AL + +GG + AT+VT TH +EEY E + S+V+ QF T+RDA+ P++E+VWGGMQYQLEHHLFPT+PRYKY LVP+V+++A + GIEYR ++EI+K N+ + + T
Sbjct: 52 IAAHYAIFLALFGPGWLFAQVAIGGAMLATIVTCTHQSEEYYEEYEDSFVDNQFSTSRDAVCSNPISEYVWGGMQYQLEHHLFPTMPRYKYPALVPVVQQWAAEQGIEYRTAGEFEIVKRNIDTYKRVGAT 182 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1647.4664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1647.4664.1 >prot_Ecto-sp13_S_contig1647.4664.1 ID=prot_Ecto-sp13_S_contig1647.4664.1|Name=mRNA_Ecto-sp13_S_contig1647.4664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp ALLALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSback to top mRNA from alignment at Ecto-sp13_S_contig1647:15122..16101- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1647.4664.1 ID=mRNA_Ecto-sp13_S_contig1647.4664.1|Name=mRNA_Ecto-sp13_S_contig1647.4664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=980bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:15122..16101- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1647:15122..16101- >mRNA_Ecto-sp13_S_contig1647.4664.1 ID=mRNA_Ecto-sp13_S_contig1647.4664.1|Name=mRNA_Ecto-sp13_S_contig1647.4664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:15122..16101- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |