mRNA_Ecto-sp13_S_contig1647.4663.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A6H5JH73_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH73_9PHAE) HSP 1 Score: 731 bits (1887), Expect = 7.720e-265 Identity = 375/406 (92.36%), Postives = 383/406 (94.33%), Query Frame = 1
Query: 55 MTTRSWQPLCYVLLLTLSSCQRASCTIESNPVPSTAAATTAVLS--DSAQ-DNHHRQQVLETDDIGGGDPDSCLGSQHQHQRQRGENMVVDGEEGTNKKPHSPLALDGDEAVEVRKGEEAAAASTTTAPGSTADDMEDEGQEGVDSISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISILGTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVARLNSAAEGQGIPPKAAGDDGKPTDLTGKS 1263
MTTRSWQP+CYVL+L LSSCQRASC+IE NPVPSTAAATTAVLS DSA D RQQV ETDDIGGGDPDSCLGSQHQHQRQRGE+MVVDGEEGTNK PHSP ALDGDEAVEV K EEAAA STTTAPGSTADDMED+GQEGVDS SIPERYIVGCGGDVAEA RRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILD+GENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLD RTRAKISILGTNYLEEMKEEID+SQIPPEYGGSSGRAIDDSDDERKIQALVA LNSAAEGQG+ PKAAGDDGK LTGKS
Sbjct: 1 MTTRSWQPICYVLVLALSSCQRASCSIEGNPVPSTAAATTAVLSLSDSAPPDXXXRQQVPETDDIGGGDPDSCLGSQHQHQRQRGEDMVVDGEEGTNKNPHSPPALDGDEAVEVLKDEEAAAXSTTTAPGSTADDMEDKGQEGVDSSSIPERYIVGCGGDVAEAGRRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDRGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDTRTRAKISILGTNYLEEMKEEIDISQIPPEYGGSSGRAIDDSDDERKIQALVALLNSAAEGQGMAPKAAGDDGKSAYLTGKS 406
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE) HSP 1 Score: 182 bits (463), Expect = 8.750e-48 Identity = 101/253 (39.92%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 490 IPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKAN-ELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISILGTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVARLNSAAEGQGI---PPKAAGDDG 1236
IP RY+ G+ A RWKAT++WRKEN++D IL PQ FH+ R+ FP + GRSR G V++E++G VD+ +L + + +L +++F++E ++R++ D AQ I +ED+ VR L K+ ++A+ + HYVERCHK++++NAP F +RVVS L ARTR KI ILG++ L +++EID +P EYGG+ + DS +ER ++ LV +N+ A+ + PK GDDG
Sbjct: 130 IPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVL-----QPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSD-LTVLQDEIDPQLLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEATVAATPKN-GDDG 375
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A835Z260_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z260_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.790e-43 Identity = 87/263 (33.08%), Postives = 149/263 (56.65%), Query Frame = 1
Query: 394 GEEAAAASTTTAPGSTADDMEDEGQEGVDSISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISILGTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVARL 1182
G+++++AS + P + + D+G G + IP RYI G GD+AEA RRW T++WRK KVD +L+ PQ HF ++ +P ++ R++ G V +E G+ DL K E + + L +Y+++ E +WR LD GE +++ +++ D+ GV +V + + AHY ER K +++NAP F +W+V+S ++ A TRAK+ + G Y++++ E ID+ IP + GG SD+E ++ V ++
Sbjct: 14 GQDSSSASVSATPATNGQPLLDDGYPG--DLEIPIRYIKGMEGDMAEARRRWVETLKWRKSYKVDTMLDEPQLHFDAIKKYYPHYVSKRAKNGCLVYYEIPGETDLKKLRENGVDIDQLIRHYIYITEFIWRR-LDTGE----ESKLLSIMDLRGVSLAQFAGEVREYMVRAAKLIGAHYPERSFKIFVLNAPWWFNMVWKVLSPLMHANTRAKVVVCGATYMDKLSELIDIESIPQDIGGRDANYGLKSDEEVALKEHVYKV 269
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: W2QZT3_PHYPN (CRAL-TRIO domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=W2QZT3_PHYPN) HSP 1 Score: 168 bits (426), Expect = 6.240e-43 Identity = 98/278 (35.25%), Postives = 155/278 (55.76%), Query Frame = 1
Query: 355 LALDGDEAVEVRKGEEAAAASTTTAPGSTADDMEDEGQEGVDS--ISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVAR 1179
L +D E +E + +E A S T +P S D + + + I+ R+I G GD + R+ AT+EWRK+N +D IL TP P+F ++ +P + HGR+R G+PV +ER GK+DL L + L +Y+++ E +WR++ ND + ITV DV G+ + L +VL ++ + AHY ER +IIN P F +WR+V M+D TR K+ +L G+ L+E++ ID+ IP ++GG G A+ DS++E + A V +
Sbjct: 320 LTVDRIEVIEADQDKEPAL-SETASPVSDIDGITESETNAISGGPIAFSPRFIAGEKGDEEKGRARYLATLEWRKDNNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVV-----EPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE-GVALGDSEEEHALAAHVKK 590
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A3M6VID9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VID9_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.440e-43 Identity = 91/233 (39.06%), Postives = 140/233 (60.09%), Query Frame = 1
Query: 484 ISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVAR 1179
I+ R+I G GDV + R+ AT+EWRKEN +D+IL TP F ++ +P F HGR+R G+PV +ER GK+DLA L + L +Y+++ E +WR++ ND+A+ +TV DVAG+ + L +VL ++ + AHY ER + +IIN P F +WR+V ++D TR K+ +L G+ L E+++ ID IP ++GG G A+ DSD+E + A V +
Sbjct: 532 IAFSPRFIAGEKGDVEKGRARYVATLEWRKENGIDDILVTPHRTFEIFKRYYPQFFHGRTRDGLPVYYERPGKIDLAALKREGLSIDDLLRHYMYITEYLWRVL-----EPNDEARSMTVLDVAGIGMYDLGGEVLDFIKRASAFTGAHYPERSARIFIINTPGWFNMVWRMVKPLIDPVTREKVHMLKGSGILVELEKLIDRENIPSDFGGD-GTALGDSDEEHALAAHVQK 758
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A7R9U9K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K9_9STRA) HSP 1 Score: 163 bits (412), Expect = 9.550e-43 Identity = 90/240 (37.50%), Postives = 138/240 (57.50%), Query Frame = 1
Query: 472 GVDSISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISILGTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVARLNSA 1191
G ++ +PER+++ GGD+ A +R+ AT WR+E+++D +L TP+P F + +++FP FLHGRSRKG V +ER+G +D + L LT + VFL E ++ + + DA+ + V DV G+ L ++LS L+ T M+AHY ER +IINAP FT+ WRVV ++ +TRA+I ILG N+ +E+ I + P EY G + E + V LNS+
Sbjct: 121 GGEASMVPERFLLAEGGDLERASQRFAATQLWREEHELDRVLSTPRPTFDKVKRLFPHFLHGRSRKGNVVRYERLGDIDAGRLAASGLSAVDLTNHLVFLAEYIFSHL----DAHRPDAKVLVVCDVKGISIGSLKGEILSFLQMSTQVMQAHYPERMESMFIINAPFWFTSAWRVVGVLMAPQTRARIKILGANFQDELAAYIPPNGAPFEYVDGGGLPLGRDPQELSLLDFVRGLNSS 356
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: G4YXA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXA9_PHYSP) HSP 1 Score: 167 bits (422), Expect = 7.460e-42 Identity = 96/281 (34.16%), Postives = 155/281 (55.16%), Query Frame = 1
Query: 355 LALDGDEAVEVRKGEEAAAASTTTAPGSTADDMEDEGQEGVDSIS-----IPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALVAR 1179
L +D E +E + +E A + T + DM E ++IS R+I G GDV + R++AT++WRKEN +D IL TP P+F ++ +P + HG++R G PV +ER GK+DL L + L +Y+++ E +WR++ +D + ITV DV G+ + L +VL ++ + AHY ER +IIN P F +WR+V ++D TR K+ +L G+ L+E++ ID+ IP ++GG G A+ DS++E + A V +
Sbjct: 431 LTVDSIEVIEADQDKEPAVSETASPVSDVTTDMTTETATPENAISGGPIAFSPRFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVV-----EPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGGG-GAALGDSEEEHALAAHVKK 705
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A0W8C751_PHYNI (Threonine ammonia-lyase n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C751_PHYNI) HSP 1 Score: 168 bits (425), Expect = 9.650e-42 Identity = 98/274 (35.77%), Postives = 153/274 (55.84%), Query Frame = 1
Query: 355 LALDGDEAVEVRKGEEAAAASTTTAPGSTADDMEDEGQEGVDS--ISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQA 1167
L +D E +E + +E A S T +P S D + + + I+ R+I G GD + R+ AT+EWRKEN +D IL TP P+F ++ +P + HGR+R G+PV +ER GK+DL L + L +Y+++ E +WR++ ND + ITV DV G+ + L +VL ++ + AHY ER +IIN P F +WR+V M+D TR K+ +L G+ L+E++ ID+ IP ++GG G A+ DS++E + A
Sbjct: 417 LTVDRIEVIEADQDKEPAL-SETASPVSDIDGITESETNAISGGPIAFSPRFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVV-----EPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE-GVALGDSEEEHALAA 683
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A225WCR7_9STRA (SEC14 cytosolic factor n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCR7_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.610e-41 Identity = 99/278 (35.61%), Postives = 152/278 (54.68%), Query Frame = 1
Query: 355 LALDGDEAVEVRKGEEAAAASTTTAPGSTADDMEDEGQEGVDSISIP----ERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALV 1173
L +D E +E + +E A + T + D E E + +IS P R+I G GD + R+ AT+EWRKEN +D IL TP P+F +Q +P + HGR+R+G PV +ER GK+ L L + L +Y+++ E +WR++ ND + ITV DV G+ + L +VL ++ + AHY ER +IIN P F +WR+V ++D TR K+ +L G+ L+E++ ID IP ++GG G A+ DS++E + A V
Sbjct: 433 LTVDMVEVIEADQDKEPAMSDTASPVSDLNADTSSETTE-IQAISGPIAFSPRFIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVV-----EPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGGE-GVALGDSEEEHALAAHV 703
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Match: A0A3F2RWM8_9STRA (Threonine ammonia-lyase n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM8_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.280e-40 Identity = 86/231 (37.23%), Postives = 134/231 (58.01%), Query Frame = 1
Query: 484 ISIPERYIVGCGGDVAEAERRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKANELELPLSVLTPNYVFLNECVWRLILDKGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDARTRAKISIL-GTNYLEEMKEEIDVSQIPPEYGGSSGRAIDDSDDERKIQALV 1173
I+ R++ G GDV + +R+ T+EWRKEN +D IL TP P+F ++ +P + HGR+R G+PV +ER GK+DL L + L +Y+++ E +WR++ ND + ITV DV G+ + L +VL ++ + AHY ER +IIN P F +WR+V ++D TR K+ +L G+ L E++ ID+ IP ++GG G A+ DS +E + A V
Sbjct: 242 IAFSPRFVAGEKGDVEKGRQRYLHTLEWRKENNIDNILVTPHPNFEIIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVV-----EPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILRELETLIDLENIPSDFGGE-GVALGDSTEEHTLAAHV 466 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1647.4663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1647.4663.1 >prot_Ecto-sp13_S_contig1647.4663.1 ID=prot_Ecto-sp13_S_contig1647.4663.1|Name=mRNA_Ecto-sp13_S_contig1647.4663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp APIPPLRVSYCRECSPRRMTTRSWQPLCYVLLLTLSSCQRASCTIESNPVback to top mRNA from alignment at Ecto-sp13_S_contig1647:7241..10983+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1647.4663.1 ID=mRNA_Ecto-sp13_S_contig1647.4663.1|Name=mRNA_Ecto-sp13_S_contig1647.4663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3743bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:7241..10983+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1647:7241..10983+ >mRNA_Ecto-sp13_S_contig1647.4663.1 ID=mRNA_Ecto-sp13_S_contig1647.4663.1|Name=mRNA_Ecto-sp13_S_contig1647.4663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:7241..10983+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |