mRNA_Ecto-sp13_S_contig1647.4662.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A6H5JI82_9PHAE (Protein phosphatase methylesterase-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI82_9PHAE) HSP 1 Score: 548 bits (1412), Expect = 4.570e-186 Identity = 296/335 (88.36%), Postives = 304/335 (90.75%), Query Frame = 3
Query: 636 QAPLQTASPLPHPXXVAQSPTSSCSSRSSGGGDPPNGDPTTIGANTPPQGSEDHGSGVVTTNTTTGSATQPQRASPEIPSNDGAAGEAHSNSGRGSSSTGSPTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALRNSVFRRGTSGATHGREPPAGEEEELLRLKLARAREQAKRNRR 1640
QAPL+TA P XX CSSRS GDPP+GDPTTIGA+ PPQGSEDHG GVVTTNTT GSATQP RASPEIPSNDGAA EAHS+SG GSSSTGSPTIRLLLVGHSLGGS+AVRVAGAA+ELR RCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSF SMEDAVQWHVKTGAVRNSASAHAVVPSRLK DPA DG V WRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETA+SIINFALRNSV RRGTSGATHG +PPAGEEEELLRLKLARAREQA RNRR
Sbjct: 207 QAPLRTACPXXXXXXXXXXXXXXCSSRSXXXGDPPSGDPTTIGAHPPPQGSEDHGRGVVTTNTTPGSATQPHRASPEIPSNDGAAEEAHSSSGSGSSSTGSPTIRLLLVGHSLGGSVAVRVAGAAQELRERCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFPSMEDAVQWHVKTGAVRNSASAHAVVPSRLKMDPARDGLVEWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAESIINFALRNSVLRRGTSGATHGGKPPAGEEEELLRLKLARAREQANRNRR 541
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: D7FSV3_ECTSI (Protein phosphatase methylesterase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV3_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 1.290e-149 Identity = 233/249 (93.57%), Postives = 236/249 (94.78%), Query Frame = 3
Query: 894 EAHSNSGRGSSSTGSPTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALRNSVFRRGTSGATHGREPPAGEEEELLRLKLARAREQAKRNRR 1640
EAHS S GSSST SPTIRLLLVGHSLGGSIAVRVAGAA ELRRRCGGAAEI GVVAVDVVEGTALSALDDMPEILRKIPRSF SMEDAV+WHVKTGAVRNS+SAHAVVPSRLK DPA DGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEE AKSIINFALRNSVFRRGTSGATHG +PPAGEEEELLRLKLARAREQA R RR
Sbjct: 130 EAHSGSASGSSSTSSPTIRLLLVGHSLGGSIAVRVAGAAGELRRRCGGAAEITGVVAVDVVEGTALSALDDMPEILRKIPRSFPSMEDAVRWHVKTGAVRNSSSAHAVVPSRLKNDPARDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEEAAKSIINFALRNSVFRRGTSGATHGGKPPAGEEEELLRLKLARAREQANRTRR 378
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A835YP78_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP78_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.300e-58 Identity = 112/234 (47.86%), Postives = 156/234 (66.67%), Query Frame = 3
Query: 939 PTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAE-IAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRL-----KKDPAPDGRVV--WRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALRNSVFRRGTSGATHGREPPAGEEEELLRLKLARAR 1616
P +R+LLVGHSLGG+IAVR+A ++R I GVV +DV EGTAL++L M ++ +P+SF +++DA+ WH+K+G++R++A+A VPSRL +++ +G V WRTDL TER W WF G+S AF+ L +PKLLIVAGMDRLDTELT +QG++QLKLVYG+GHS+ EDQP++ A ++ FA + G+ P E++EL R KL RAR
Sbjct: 107 PPVRVLLVGHSLGGAIAVRMAAHERTPQQRSDADTYCIGGVVCIDVAEGTALASLPHMAAVIASMPQSFATIDDAIAWHLKSGSIRSAAAARVTVPSRLVLASCEREGEGEGGGVYKWRTDLACTERFWEGWFMGLSSAFINLRIPKLLIVAGMDRLDTELTVGQIQGKFQLKLVYGAGHSVHEDQPQQVASHVLAFARHFGILNVGS---------PQAEQDEL-RAKLERAR 330
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A6G0WGK1_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGK1_9STRA) HSP 1 Score: 192 bits (487), Expect = 6.980e-52 Identity = 96/195 (49.23%), Postives = 139/195 (71.28%), Query Frame = 3
Query: 930 TGSPTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALR 1514
+G+PT ++ VGHS+GG+IA+RVA A EL+ +AG++ +DVVEGTAL+AL M +L P FTS E+A+QW +++GAVRN+ SA +PS+++ D DG WRT+L ++ ++W WF G+S+ FL + +PKLL++AG DRLDT LT MQG++QL+L+YGSGH IQED PE TA++++ F R
Sbjct: 103 SGAPTPSII-VGHSMGGAIAIRVA-ARNELKT-------LAGMIIIDVVEGTALAALSHMQAVLANRPSHFTSEEEAIQWSLRSGAVRNAESARVSIPSQIRLDS--DGIFAWRTNLFSSAQYWNGWFTGISEMFLNVSIPKLLLLAGTDRLDTALTRGQMQGKFQLRLMYGSGHVIQEDCPERTAEALLEFCAR 286
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A024TWA9_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWA9_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.830e-50 Identity = 95/188 (50.53%), Postives = 133/188 (70.74%), Query Frame = 3
Query: 951 LLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALR 1514
++LVGHS+GG+IA+RVA A +L+ + G+V +DVVEGTAL+AL M IL + P F S E+A++W ++TGAVRN+ SA +PS+L ++ G WRTDL A+ ++W WF G+S FL + VPK+L++AG DRLDTELT MQG++QL L+YGSGH IQED P++TA+S++ F R
Sbjct: 108 MILVGHSMGGAIAIRVA-ATRQLQ-------SLGGMVVIDVVEGTALAALSHMQGILNRRPSRFGSPEEAIKWSLQTGAVRNAESARVSIPSQLHQEST--GEWTWRTDLFASAQYWTGWFTGISSLFLNVAVPKVLLLAGTDRLDTELTRGQMQGKFQLLLLYGSGHVIQEDCPDKTAQSLLEFCGR 285
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A024GQH4_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQH4_9STRA) HSP 1 Score: 187 bits (474), Expect = 5.420e-50 Identity = 102/222 (45.95%), Postives = 140/222 (63.06%), Query Frame = 3
Query: 951 LLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALRNSVFRRGTSGATHGREPPAGEEEELLRLKLARAR 1616
++LVGHSLGGSIAVR A A EL +AGV+ +DVVEGTA+S+L M IL P F S++ A+ W +++G +RN+ +A VPS+L KD DG WRTDL+ + +WR+WFEG+S FL L + KLLI+AG DRLDT LT MQG ++L+L+YGSGH IQED PE+ + ++ F R G ++ E L+++LA+AR
Sbjct: 105 IVLVGHSLGGSIAVRTA-ARNEL-------GNLAGVMVIDVVEGTAISSLQHMNTILDNKPTQFASVQKAIDWSLQSGTIRNAEAAQISVPSQLVKDE--DGSYRWRTDLKRSAMYWREWFEGLSDLFLSLSIGKLLILAGFDRLDTALTRGQMQGNFELRLLYGSGHVIQEDCPEKLSAVLVEFLERCCCISANAGGNSN---------ESSLQIRLAKAR 307
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A1V9Z0J3_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0J3_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.040e-49 Identity = 96/194 (49.48%), Postives = 133/194 (68.56%), Query Frame = 3
Query: 933 GSPTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALR 1514
GSP L+LVGHS+GG+IA+RVA +A+ + G+V +DVVEGTAL+AL M +L P SF S ++A+QW ++TGAVRN+ SA +PS++ R VWRTDLRA+ +W+ WF G+S+ FL +PK+L++AG DRLDT LT MQG++QL L+YGSGH IQED P++TA +++ F R
Sbjct: 108 GSP---LVLVGHSMGGAIAIRVASSAQ--------LKTLVGMVVIDVVEGTALAALSHMQAVLANRPESFASHDEAIQWSLQTGAVRNAESARVSIPSQVV---GAGDRFVWRTDLRASAPYWKGWFTGISELFLGTTLPKVLLLAGTDRLDTALTRGQMQGKFQLLLMYGSGHVIQEDCPDKTADALLEFCGR 287
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: F0W3S0_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3S0_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.130e-49 Identity = 99/222 (44.59%), Postives = 144/222 (64.86%), Query Frame = 3
Query: 951 LLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALRNSVFRRGTSGATHGREPPAGEEEELLRLKLARAR 1616
L+LVGHSLGGSIAVR A A ++L + GV+ +DVVEGTA+++L+ M IL P F S++ A+ W +++G +RN+ +A VPS+L+KD DG WR+DL+ + +WR WFEG+S FL L + KLLI+AG DRLDT LT MQG+++L+L+YGSGH IQED P++ + +++ F +R + G H E L+++LA+AR
Sbjct: 105 LVLVGHSLGGSIAVRAA-ARKDLDN-------LVGVMVIDVVEGTAIASLEHMHTILDNKPTQFASIQKAIDWSLQSGMIRNAKAAQISVPSQLRKDE--DGSYRWRSDLKNSASYWRGWFEGLSDLFLGLSIAKLLILAGFDRLDTALTRGQMQGKFELRLLYGSGHVIQEDCPDKLSAALMEFLVRCCCLSDNSGGRLH--------ENSSLQIRLAKAR 308
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A1V9ZQQ1_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQQ1_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.990e-49 Identity = 94/189 (49.74%), Postives = 135/189 (71.43%), Query Frame = 3
Query: 951 LLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRV-VWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALR 1514
++LVGHS+GG+IA+RVA A+ +L+ + G+V +DVVEGTAL+AL M +L P +F S E+AV W +++GAVRN SA +PS++ K A DG VWRT+LRA+ ++W+ WF G+S+ FL++ +PK+L++AG DRLDT LT MQG++QL L+YGSGH IQED P +TA +++ F R
Sbjct: 111 MILVGHSMGGAIAIRVA-ASNQLK-------SLVGMVVIDVVEGTALAALSHMQAVLSNRPDTFASEEEAVHWSLQSGAVRNPESARVSIPSQICK--ANDGDYYVWRTNLRASAKYWKGWFTGISELFLDMTLPKVLLLAGTDRLDTALTRGQMQGKFQLLLMYGSGHVIQEDCPSKTADALLEFCAR 289
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Match: A0A067C280_SAPPC (Protein phosphatase methylesterase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C280_SAPPC) HSP 1 Score: 185 bits (469), Expect = 2.680e-49 Identity = 97/203 (47.78%), Postives = 139/203 (68.47%), Query Frame = 3
Query: 912 GRGSSST--GSPTIRLLLVGHSLGGSIAVRVAGAAEELRRRCGGAAEIAGVVAVDVVEGTALSALDDMPEILRKIPRSFTSMEDAVQWHVKTGAVRNSASAHAVVPSRLKKDPAPDGRVVWRTDLRATERHWRDWFEGMSKAFLELPVPKLLIVAGMDRLDTELTAAHMQGRYQLKLVYGSGHSIQEDQPEETAKSIINFALR 1514
G G S+T GSP ++LVGHS+GG+IA+RVA + G + G+V +DVVEGTAL+AL M +L P +F S ++AVQW ++TGAVRN+ SA +PS++ +D +WRT+LRA+ ++W+ WF G+S+ FL +PK+L++AG DRLDT LT MQG++QL L+YGSGH IQED P++TA +++ F R
Sbjct: 99 GEGPSATERGSP---MILVGHSMGGAIAIRVAAS--------GLLKTLVGMVVIDVVEGTALAALSHMQAVLANRPDTFASEDEAVQWSLQTGAVRNAESARVSIPSQIIRD---GDHYIWRTNLRASAKYWKGWFTGISELFLGTTLPKVLLLAGTDRLDTALTRGQMQGKFQLLLLYGSGHVIQEDCPDKTADALLEFCSR 287 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1647.4662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1647.4662.1 >prot_Ecto-sp13_S_contig1647.4662.1 ID=prot_Ecto-sp13_S_contig1647.4662.1|Name=mRNA_Ecto-sp13_S_contig1647.4662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp MGPPQGDGHEGPGSSDRRVQLPPPPPASWPAAGSGKPLGGAASAIAAHVPback to top mRNA from alignment at Ecto-sp13_S_contig1647:1300..6984- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1647.4662.1 ID=mRNA_Ecto-sp13_S_contig1647.4662.1|Name=mRNA_Ecto-sp13_S_contig1647.4662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5685bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:1300..6984- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1647:1300..6984- >mRNA_Ecto-sp13_S_contig1647.4662.1 ID=mRNA_Ecto-sp13_S_contig1647.4662.1|Name=mRNA_Ecto-sp13_S_contig1647.4662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1647:1300..6984- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |