mRNA_Ecto-sp13_S_contig16460.4658.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: D8LC66_ECTSI (WD repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC66_ECTSI) HSP 1 Score: 160 bits (406), Expect = 6.670e-44 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1
Query: 10 RDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
RDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLH MRSRFNSRFLALRTIK+EILSTVSADNRRLREIDAELG
Sbjct: 1300 RDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHAMRSRFNSRFLALRTIKQEILSTVSADNRRLREIDAELG 1387
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A6H5KI67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI67_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.140e-43 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1
Query: 10 RDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
RDVEAIALANSNMGDYKLKSS DYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLR+IDAELG
Sbjct: 87 RDVEAIALANSNMGDYKLKSSTDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLRQIDAELG 174
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A482T059_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T059_9ARCH) HSP 1 Score: 103 bits (256), Expect = 1.160e-23 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 10 RDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAEL 270
RD++AI A +GDYKLK S DYEVPE+ ++NVVKK R+M +LE+S+ TMR +FN RFLALR +KREI+ +V DN+R+REID EL
Sbjct: 1028 RDLDAIRHAEKTIGDYKLKCSDDYEVPEDQRINVVKKIRQMAMLEESMLTMRLQFNDRFLALRQLKREIIFSVRRDNQRIREIDGEL 1114
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S0Z0C5_9CRYP (Hypothetical protein (Fragment) n=4 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0Z0C5_9CRYP) HSP 1 Score: 96.3 bits (238), Expect = 1.660e-23 Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
DV AI AN+ MGDYKLK+ PDY VPE +++N KK+R+MVLLE+S++T++ FN RFLALR +K I + + ADN R++EI+ ELG
Sbjct: 57 DVAAIEEANTLMGDYKLKTDPDYVVPEHLRINADKKRRQMVLLEESIYTIKMAFNDRFLALRELKSRIRANIRADNLRIQEINQELG 143
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S1G790_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G790_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.770e-23 Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAEL 270
DVEA+ A NMGDYKLKS+PDY+VPE +++ VKK+R+MVLLE+S+ +++S FN R LALR +KR I+ V ADN RL+ I+ EL
Sbjct: 40 DVEAVTHARENMGDYKLKSAPDYKVPEAKRVDNVKKRRQMVLLEESVFSIKSDFNKRLLALRDLKRAIVENVRADNARLKAINEEL 125
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S0DYL1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYL1_9CRYP) HSP 1 Score: 97.4 bits (241), Expect = 6.390e-22 Identity = 47/91 (51.65%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 ECSRDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
E +DV AI A +MGDYKLK+ DY VPE ++++ KK+R+M+LLE+S+H+++ FN R LALR +K++I+ + ADN+R+REID ELG
Sbjct: 83 EDPKDVSAIQHAQKHMGDYKLKTEEDYVVPEHLRIDAEKKRRQMILLEESIHSIKMGFNDRLLALRDLKKKIIGNIQADNQRIREIDEELG 173
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S2C7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7U9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.810e-20 Identity = 43/79 (54.43%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRL 249
D+ AIA A +NMGDYKLK +PDYEVPE+ +N KK+R+MVLLE+++ +++RFN RFLALR +KR+I ++ + N+R+
Sbjct: 83 DLAAIAYAENNMGDYKLKMAPDYEVPEDQAVNSEKKRRQMVLLEENMLNIKTRFNKRFLALRDLKRQIALSIISSNKRV 161
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S1X257_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X257_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 2.360e-20 Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAEL 270
DV I A +NMGD+KLKS P++ VPEE +LN KK+R+M+LLE+ ++ +R FNSRFLALR +K+++ + + N+RLRE+ + L
Sbjct: 37 DVALIVEAENNMGDFKLKSDPEFVVPEEERLNTEKKRRQMILLEEGMYNIRMEFNSRFLALRDVKKKVCADIKDKNKRLRELQSAL 122
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S0N172_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N172_9CRYP) HSP 1 Score: 86.3 bits (212), Expect = 8.660e-20 Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
D AI A + MGD+KLK+ + VPE ++++ KK+R+MVLLE+S+H +R FN R LALR +KR IL+T++AD R+R I+ ELG
Sbjct: 35 DAAAIRAAEARMGDWKLKTDEGFVVPEHLRIDADKKRRQMVLLEESVHAVRMGFNERLLALRDLKRRILTTIAADKARIRAINRELG 121
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Match: A0A7S0RW45_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RW45_9CHLO) HSP 1 Score: 87.8 bits (216), Expect = 1.150e-19 Identity = 44/87 (50.57%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 13 DVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSLHTMRSRFNSRFLALRTIKREILSTVSADNRRLREIDAELG 273
DV AI A +NMGD+KLK+ +Y VPEE + N VKK+R+MVLLE+S+H+++ FN+RFLALR +K +++ + N R++EI+ +LG
Sbjct: 67 DVAAIQEAINNMGDFKLKTDVNYIVPEEQRQNAVKKRRQMVLLEESIHSIKMDFNTRFLALRDVKSQMVKDIERSNSRIKEINEKLG 153 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16460.4658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16460.4658.1 >prot_Ecto-sp13_S_contig16460.4658.1 ID=prot_Ecto-sp13_S_contig16460.4658.1|Name=mRNA_Ecto-sp13_S_contig16460.4658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp ECSRDVEAIALANSNMGDYKLKSSPDYEVPEEMQLNVVKKQREMVLLEDSback to top mRNA from alignment at Ecto-sp13_S_contig16460:6..831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16460.4658.1 ID=mRNA_Ecto-sp13_S_contig16460.4658.1|Name=mRNA_Ecto-sp13_S_contig16460.4658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=826bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16460:6..831- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16460:6..831- >mRNA_Ecto-sp13_S_contig16460.4658.1 ID=mRNA_Ecto-sp13_S_contig16460.4658.1|Name=mRNA_Ecto-sp13_S_contig16460.4658.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16460:6..831- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |