prot_Ecto-sp13_S_contig1646.4656.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1646.4656.1
Unique Nameprot_Ecto-sp13_S_contig1646.4656.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length567
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1646.4656.1 vs. uniprot
Match: D8LTQ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ7_ECTSI)

HSP 1 Score: 673 bits (1737), Expect = 6.650e-238
Identity = 464/567 (81.83%), Postives = 465/567 (82.01%), Query Frame = 0 
Query:    1 MEQPPNITPASPAPFSTAAPAQVLDGQQDNGQIDVQKDPNEQTRKGPGQPKKVTSCKYIKEEKIAILSVLLEVGMELWEMEKSINKPWRMLFWEQRVALPVREKLKSNARYAEMGHDVDLRFSGSFGVENLRKWVRSQRTQELERVEGERQRMPGSPPGRPLSEVQQLRARVFEEITAASLEKDGEGVGEVPRAVGGGDTQAVXXXXXXXXXXRSGTPSAACGGATQAGRDPSPEPFAALFASPGQNGGSSATVQXXXXXXXXXXXXXXXPAAISAPGGLSTSIVVAGGAGAADGAPSTSAGSPFMSPQNGNDSASLLRQRQPQQPXXXXXXQTTPVRSANRPLLPKPPAVAGNDPAQAGGANGIDVGXXXXXXXXXXXXXXXXXXXAAGVSRPRTASETTPEDFRLGSGGAVRGYSTAVAXXXXXXXXXXXXXXXXKRKKVDHTDLVNRVMAQISTLNLPLAATALLVQSLQAKIGSTNFGRGGGGAAAIAAVGGEALGGNGNLAPGERGARGGALSLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNDQVVADEVL 567
            MEQPPNITPASPAPFSTAAPAQVLDGQQDN QIDVQKDPNEQTRK P QPKKVTSCKYIKEEKIAILSVLLEVGMELWEMEKSINKPWRMLFWEQRVALPVREKLKSNARYAEMGHDVDLRFSGSFGVENLRKWVRSQRTQELERVEGERQRMPGSPPGRPLSEVQQLRARVFEEITAASLEKDGEGVGEVPRAVG GDTQAV XXXXXXXXX           ATQAGRDPSPEPF ALFA PGQNGGSSA   XXXXXXXXXXXXX  PAAISAPG LSTS+VVAGGAGAADGAPSTSAG                                                                   XXXXXXXXXXXXXXXXXX   VSRPRTASETTPEDFRLGSGGAVRGYSTAVAXXXXXXXXXXXXXXXXKRKKVDHTDLVNRVMAQISTLNLPLAATALLVQSLQAKIGS NF RGGG AAAIAA G EALGGNGNLA GERGARGGA SLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNDQVV DEVL
Sbjct:    1 MEQPPNITPASPAPFSTAAPAQVLDGQQDNSQIDVQKDPNEQTRKSPSQPKKVTSCKYIKEEKIAILSVLLEVGMELWEMEKSINKPWRMLFWEQRVALPVREKLKSNARYAEMGHDVDLRFSGSFGVENLRKWVRSQRTQELERVEGERQRMPGSPPGRPLSEVQQLRARVFEEITAASLEKDGEGVGEVPRAVGSGDTQAVAXXXXXXXXXXXXXXXXXX--ATQAGRDPSPEPFGALFAPPGQNGGSSAXXXXXXXXXXXXXXXXKAPAAISAPG-LSTSVVVAGGAGAADGAPSTSAGXXXX---------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXVSRPRTASETTPEDFRLGSGGAVRGYSTAVAXXXXXXXXXXXXXXXXKRKKVDHTDLVNRVMAQISTLNLPLAATALLVQSLQAKIGSPNFTRGGGSAAAIAAAGVEALGGNGNLAQGERGARGGASSLEERQLLLEERLQASREAESAQALAERRLKLMEEMRAAGNDQVVTDEVL 501
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1646.4656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTQ7_ECTSI6.650e-23881.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1646contigEcto-sp13_S_contig1646:1..7341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1646.4656.1mRNA_Ecto-sp13_S_contig1646.4656.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1646 1..7419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1646.4656.1 ID=prot_Ecto-sp13_S_contig1646.4656.1|Name=mRNA_Ecto-sp13_S_contig1646.4656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=567bp
MEQPPNITPASPAPFSTAAPAQVLDGQQDNGQIDVQKDPNEQTRKGPGQP
KKVTSCKYIKEEKIAILSVLLEVGMELWEMEKSINKPWRMLFWEQRVALP
VREKLKSNARYAEMGHDVDLRFSGSFGVENLRKWVRSQRTQELERVEGER
QRMPGSPPGRPLSEVQQLRARVFEEITAASLEKDGEGVGEVPRAVGGGDT
QAVAAAAAAAAAARSGTPSAACGGATQAGRDPSPEPFAALFASPGQNGGS
SATVQAAAAAAAAAASAAKAPAAISAPGGLSTSIVVAGGAGAADGAPSTS
AGSPFMSPQNGNDSASLLRQRQPQQPQQQPQPQTTPVRSANRPLLPKPPA
VAGNDPAQAGGANGIDVGGGGAFFAAGGTTIAAAAAGAAGVSRPRTASET
TPEDFRLGSGGAVRGYSTAVAAAAAAAASATTTAPPTKRKKVDHTDLVNR
VMAQISTLNLPLAATALLVQSLQAKIGSTNFGRGGGGAAAIAAVGGEALG
GNGNLAPGERGARGGALSLEERQLLLEERLQASREAESAQALAERRLKLM
EEMRAAGNDQVVADEVL
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