mRNA_Ecto-sp13_S_contig16457.4655.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A7S4VZR9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VZR9_9DINO) HSP 1 Score: 129 bits (324), Expect = 1.240e-33 Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAH +G PYD +SWP EN VS +GEGWHNWHHKYPFDYSASE GVS QFNPT+M ID A G+VTDRKRA AW + K+
Sbjct: 34 NSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKE 119
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.730e-32 Identity = 58/86 (67.44%), Postives = 67/86 (77.91%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAH FG PYD +SWP EN VS +GEGWHNWHHKYPFDY+ASE GVS QFNPT+M ID A +GLVT+RKRA+ AW + K+
Sbjct: 233 NSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNWHHKYPFDYAASEFGVSTQFNPTKMLIDGFAKLGLVTNRKRAVGAWSKLKE 318
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK) HSP 1 Score: 129 bits (324), Expect = 2.390e-31 Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAH +G PYD +SWP EN VS +GEGWHNWHHKYPFDYSASE GVS QFNPT+M ID A G+VTDRKRA AW + K+
Sbjct: 217 NSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNWHHKYPFDYSASEFGVSSQFNPTKMIIDLAAACGMVTDRKRANGAWGKLKE 302
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A6G0WMR8_9STRA (FA_desaturase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMR8_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.700e-31 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAK 256
NSAAHF+G++PYD P EN V+ F MGEGWHNWHH +P+DY+ASE GVS Q+NPT++FID+MA +GLVTDRKRAL+AW+ K
Sbjct: 205 NSAAHFYGYKPYDPDMGPTENTFVAFFAMGEGWHNWHHVFPYDYAASEFGVSAQWNPTKLFIDAMAKIGLVTDRKRALQAWEGRK 289
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A7S2V510_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V510_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.020e-31 Identity = 61/96 (63.54%), Postives = 68/96 (70.83%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAW-----KRAKQAQKCK 274
NSAAHFFG R YD WP EN +VS F +GEGWHNWHHKYPFDY+ASE G+S Q+NPT+MFID A +G V RKRA AW KRA Q K K
Sbjct: 215 NSAAHFFGDRHYDSNIWPAENPIVSFFAIGEGWHNWHHKYPFDYAASEFGISTQYNPTKMFIDLGASMGQVYKRKRATEAWELLKEKRASQEPKAK 310
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A7S2C5X7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5X7_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.690e-31 Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAH +G PYD SWP EN VS +GEGWHNWHHKYPFDY+ASE G+ QFNPT++FIDS+A VGLVT RKRA AW + K+
Sbjct: 250 NSAAHIWGDHPYDPSSWPSENPFVSLGAIGEGWHNWHHKYPFDYAASEFGIGRQFNPTKLFIDSLAVVGLVTKRKRATGAWTKLKE 335
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A485KS67_9STRA (Aste57867_10712 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS67_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.010e-31 Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAHF+G +PYD P ENA V+ F MGEGWHNWHH +P+DY+ASE GVS Q+NPT++FID+MA GLVTDRKRAL++W+ KQ
Sbjct: 206 NSAAHFYGAKPYDPTMNPTENAFVAFFAMGEGWHNWHHVFPYDYAASEFGVSAQWNPTKLFIDTMAKFGLVTDRKRALQSWEGRKQ 291
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA) HSP 1 Score: 128 bits (322), Expect = 9.870e-31 Identity = 58/86 (67.44%), Postives = 68/86 (79.07%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAKQ 259
NSAAH FG PYD SWP EN VVS +GEGWHNWHHKYPFDY+ASE GV+ QFNPT++FID+ A VGLV+ RKRA AW++ K+
Sbjct: 242 NSAAHMFGDHPYDN-SWPAENPVVSILAVGEGWHNWHHKYPFDYAASEFGVAAQFNPTKLFIDACANVGLVSKRKRATGAWEKLKE 326
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: W0TGU2_FISSO (Delta-9 acyl-CoA desaturase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=W0TGU2_FISSO) HSP 1 Score: 127 bits (320), Expect = 1.160e-30 Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAK 256
NSAAH +G PYD S+P EN +VS F +GEGWHNWHHKYPFDYSASE G+S QFNP+R+FID +A VGLV +RKR L AW K
Sbjct: 218 NSAAHLYGDHPYDVLSYPAENPLVSWFAIGEGWHNWHHKYPFDYSASEFGISSQFNPSRLFIDMLACVGLVWNRKRGLSAWAMGK 302
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Match: A0A1V9ZTZ6_9STRA (Acyl-CoA desaturase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTZ6_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.290e-30 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 2
Query: 2 NSAAHFFGHRPYDERSWPGENAVVSAFTMGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALRAWKRAK 256
NSAAHF+G PYD + P ENA+V+ F MGEGWHNWHH +P+DY+ASE GV+ Q+NPT++FID+ A +GLVTDRKRAL AW+ K
Sbjct: 205 NSAAHFYGQTPYDPKINPTENAIVAFFAMGEGWHNWHHVFPYDYAASEFGVASQYNPTKLFIDTCAKLGLVTDRKRALHAWEMKK 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16457.4655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16457.4655.1 >prot_Ecto-sp13_S_contig16457.4655.1 ID=prot_Ecto-sp13_S_contig16457.4655.1|Name=mRNA_Ecto-sp13_S_contig16457.4655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp MGEGWHNWHHKYPFDYSASELGVSMQFNPTRMFIDSMAFVGLVTDRKRALback to top mRNA from alignment at Ecto-sp13_S_contig16457:522..1877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16457.4655.1 ID=mRNA_Ecto-sp13_S_contig16457.4655.1|Name=mRNA_Ecto-sp13_S_contig16457.4655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1356bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16457:522..1877+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16457:522..1877+ >mRNA_Ecto-sp13_S_contig16457.4655.1 ID=mRNA_Ecto-sp13_S_contig16457.4655.1|Name=mRNA_Ecto-sp13_S_contig16457.4655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=198bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16457:522..1877+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |