mRNA_Ecto-sp13_S_contig16438.4641.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16438.4641.1
Unique NamemRNA_Ecto-sp13_S_contig16438.4641.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: D7G6C6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C6_ECTSI)

HSP 1 Score: 471 bits (1212), Expect = 2.060e-165
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 1
Query:    1 STQVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEAEAKVQEVRAAAANRPLEADAKPSDRW 702
            + +VMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYA AAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEAEAKVQEVRAAAANRP EADAKPSDRW
Sbjct:  167 TNKVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYANAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEAEAKVQEVRAAAANRPSEADAKPSDRW 400          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A835YIU7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 6.970e-69
Identity = 114/206 (55.34%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPR--SIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRR 615
            +V+HRDLK AN+LI A+G LK+GD+GLARS H++  + T  VITLWYRPPE+L+R T YG  VDMWSVGCI  E+L    ILPG  E+EQ+ LI+ LCGTPT ESWP   +LPDW    K     +PR  ++Q +FR  DR  VDL+D+LL LDP+KR++A +ALDH YF+  P VV P  L   +  SCHEFE K+ + KER  R
Sbjct:  151 KVIHRDLKGANLLINANGCLKIGDFGLARSMHEHMKQLTSKVITLWYRPPELLMRATLYGTDVDMWSVGCIFGEMLQRVAILPGKDEQEQMELIFGLCGTPTPESWPGVAKLPDWESCWKPKVVQRPRERTLQHRFRHLDRNVVDLLDRLLQLDPAKRITATQALDHNYFFDHPAVVAPGGLPPLSFTSCHEFEAKQRQAKERADR 356          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A7S2UWV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV7_9STRA)

HSP 1 Score: 216 bits (550), Expect = 8.420e-65
Identity = 101/195 (51.79%), Postives = 139/195 (71.28%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYA-KAAEEHKPRSIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVK 585
            +++HRD+K +N+LI   G LK+ DWGLARS+++ Q   T  VITLWYRPPE+LL   +YGP +DMWSVGC+ AELLY+ PIL G +E+ QL LI+ LCGTPT E+W     L  W+  A K  E   PR ++ +F+ F++  +DLVDKLLTLDP KR++A EALD  YFW +P  ++PS+L K ++ S HE++ +
Sbjct:  210 KILHRDIKGSNLLIDNRGYLKIADWGLARSWYEEQPYFTNRVITLWYRPPELLLGAPKYGPPIDMWSVGCLFAELLYKKPILQGRNEQHQLELIFKLCGTPTPENWSGAMRLKGWAANAPKKGEPPHPRVVRQRFQTFEQNSLDLVDKLLTLDPLKRITAEEALDANYFWTEPMPLEPSQLPKLSVTSAHEWDAR 404          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A2T7EEB5_9POAL (Protein kinase domain-containing protein n=5 Tax=Panicum TaxID=4539 RepID=A0A2T7EEB5_9POAL)

HSP 1 Score: 212 bits (539), Expect = 2.300e-62
Identity = 113/214 (52.80%), Postives = 149/214 (69.63%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSF-HDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEAEAKVQEV 645
            QV+HRD+K +N+LI   GILK+ D+GLARSF +D+    T  VITLWYRPPE+LL +T+YGPAVDMWSVGCI AELLY  PILPG +E EQL  I+ LCGTP + +WP  T++P W    K +   K R  +    FDR  +DL++++LTLDPS+R+SA +ALD  YFW DPR  +P  L K+   S HEF+ KK  +++  R+ E  AK Q++
Sbjct:  159 QVLHRDIKGSNLLIDNHGILKLADFGLARSFSYDHNAHLTNRVITLWYRPPELLLGSTQYGPAVDMWSVGCIFAELLYGKPILPGKNEPEQLTKIFELCGTPDELNWPGVTKMP-WYNNFKPSRPIKRRVKEVFKHFDRNALDLLERMLTLDPSQRISAKDALDAEYFWTDPRPAEPHTLPKYE--SSHEFQTKK--KRQXXRQAEEAAKRQKI 367          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A484MXL4_9ASTE (Protein kinase domain-containing protein n=4 Tax=Convolvulaceae TaxID=4118 RepID=A0A484MXL4_9ASTE)

HSP 1 Score: 211 bits (537), Expect = 5.190e-62
Identity = 110/202 (54.46%), Postives = 143/202 (70.79%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKER 606
            QV+HRD+K +N+LI  +G LK+ D+GLARSF  +Q  + T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI AELLY  PILPG +E EQLN IY LCGTP + +WP  T++P W    K +   K R ++  FR FDR  +DL+DK++TLDPS+R+SA +ALD  YFW DP    P  L  +   + HEF+ KK ++++R
Sbjct:  158 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSGDQNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLYGKPILPGKNEPEQLNKIYELCGTPDEINWPGVTKIP-WYNKFKPSRPMK-RRVRETFRTFDRHALDLLDKMMTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPTYE--ASHEFQTKKKRQQQR 355          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: UPI00053FBE4B (cyclin-dependent kinase C-1 n=3 Tax=Vitis TaxID=3603 RepID=UPI00053FBE4B)

HSP 1 Score: 211 bits (536), Expect = 6.690e-62
Identity = 110/210 (52.38%), Postives = 148/210 (70.48%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFH-DNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKP--RSIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEA 624
            QV+HRD+K AN+LI  +GILK+ D+GLARSF  D+    T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI AELLY  PIL G +E +QL  I+ LCG+P + +WP  +++P ++ +  A    KP  R ++  FR FDR  +DLVD++LTLDPSKR+SA +ALD  YFW+DP    P  L K+   S H+F+ KK ++++R   ++A
Sbjct:  158 QVLHRDIKGANLLINNEGILKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLYGKPILNGNNEPDQLKKIFELCGSPDENNWPGVSKIPWYNNFKPA----KPLERRVREVFRTFDRHALDLVDRMLTLDPSKRISAKDALDAEYFWNDPLPCDPKSLPKYE--SSHDFQTKKKRQQQRKNEEQA 361          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A2G9IAJ3_9LAMI (Cdc2-related protein kinase n=12 Tax=Lamiales TaxID=4143 RepID=A0A2G9IAJ3_9LAMI)

HSP 1 Score: 210 bits (535), Expect = 9.000e-62
Identity = 118/236 (50.00%), Postives = 158/236 (66.95%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSF-HDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKEAEA-KVQEVRAAAANRPLEADAKP-SDRW 702
            QV+HRD+K +N+LI  +G LK+ D+GLARSF +D     T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI AELLY  PILPG +E EQLN I+ LCGTP + +WP  +++P W    K A + K R I+  FR FDR  +DL++K+L LDP++R+SA +ALD  YFW DP    P  L K+   S HEF+ KK ++++R   + A+  K+Q  +  A   P++   +P S  W
Sbjct:  157 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDVNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLYGKPILPGKNEPEQLNKIFELCGTPDELTWPGVSKIP-WYNKFKPARQMKKR-IRELFRHFDRHALDLLEKMLVLDPAQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQRQNEELAKRQKLQHPQQHARLPPIQQTGQPHSQHW 388          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: K3Z5G3_SETIT (Protein kinase domain-containing protein n=4 Tax=Paniceae TaxID=147428 RepID=K3Z5G3_SETIT)

HSP 1 Score: 208 bits (530), Expect = 5.390e-61
Identity = 108/201 (53.73%), Postives = 141/201 (70.15%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKER 606
            QV+HRD+K +N+LI   GILK+ D+GLARSF ++   H T  VITLWYRPPE+LL +T+YG AVDMWSVGCI AELL   PILPG +E EQL  I+ LCGTP + +WP  T++P W    K +   K R  ++   FDR  +DL++K+LTLDPS+R+SA +ALD  YFW DPR   P  L K+   S HEF+ KK ++++R
Sbjct:  159 QVLHRDIKGSNLLIDNHGILKLADFGLARSFSNDHNAHLTNRVITLWYRPPELLLGSTKYGLAVDMWSVGCIFAELLSGKPILPGKNEPEQLTKIFELCGTPDELNWPGVTKMP-WYNNFKPSRPIKRRVKEAFKHFDRHALDLLEKMLTLDPSQRISAKDALDAEYFWTDPRPADPHTLPKYE--SSHEFQTKKKRQQQR 356          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A4D8XY71_SALSN (CTD kinase subunit alpha n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8XY71_SALSN)

HSP 1 Score: 208 bits (530), Expect = 7.880e-61
Identity = 109/202 (53.96%), Postives = 142/202 (70.30%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSFH-DNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFR-FDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKER 606
            QV+HRD+K +N+LI  +G LK+ D+GLARSF  D+    T  VITLWYRPPE+LL TT+YGPAVDMWSVGCI AELL   P+ PG  E EQLN I+ +CGTP++E WP  +++P W    K +   K R ++  FR FDR  +DL+DK+LTLDPS+R+SA +ALD  YFW DP    P  L K+   S HEF+ KK ++++R
Sbjct:  185 QVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLNGKPVFPGKDEPEQLNKIFDICGTPSEEIWPGVSKIP-WYNNFKPSRVIK-RRLREHFRHFDRHALDLLDKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 382          
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Match: A0A834LEH8_RHOSS (Protein kinase domain-containing protein n=3 Tax=Ericaceae TaxID=4345 RepID=A0A834LEH8_RHOSS)

HSP 1 Score: 207 bits (528), Expect = 8.220e-61
Identity = 106/201 (52.74%), Postives = 141/201 (70.15%), Query Frame = 1
Query:    7 QVMHRDLKLANMLIGADGILKVGDWGLARSF-HDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYAKAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKER 606
            QV+HRD+K +N+LI  +G LK+ D+GLARSF +D+    T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI AELL+  PILPG +E EQLN I+ LCG+P + +WP  +++P W    K   + K R  Q    FDR  +DL++K+L+LDPS+R+SA +ALD  YFW DP    P  L K+   S HEF+ KK ++++R
Sbjct:  158 QVLHRDIKGSNLLIDNEGTLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIFELCGSPDEINWPGVSKIP-WYNKFKPTRQMKKRVRQVFQHFDRHALDLLEKMLSLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 355          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16438.4641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C6_ECTSI2.060e-16597.86Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835YIU7_9STRA6.970e-6955.34Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2UWV7_9STRA8.420e-6551.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2T7EEB5_9POAL2.300e-6252.80Protein kinase domain-containing protein n=5 Tax=P... [more]
A0A484MXL4_9ASTE5.190e-6254.46Protein kinase domain-containing protein n=4 Tax=C... [more]
UPI00053FBE4B6.690e-6252.38cyclin-dependent kinase C-1 n=3 Tax=Vitis TaxID=36... [more]
A0A2G9IAJ3_9LAMI9.000e-6250.00Cdc2-related protein kinase n=12 Tax=Lamiales TaxI... [more]
K3Z5G3_SETIT5.390e-6153.73Protein kinase domain-containing protein n=4 Tax=P... [more]
A0A4D8XY71_SALSN7.880e-6153.96CTD kinase subunit alpha n=4 Tax=Salvia TaxID=2188... [more]
A0A834LEH8_RHOSS8.220e-6152.74Protein kinase domain-containing protein n=3 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16438contigEcto-sp13_S_contig16438:778..3552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score471.5
Seed ortholog evalue2.3e-130
Seed eggNOG ortholog2880.D7G6C6
Model size705
KEGG koko:K08819
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG0600@1,KOG0600@2759
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-10_001350.1
EC2.7.11.22,2.7.11.23
Cds size693
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16438.4641.1prot_Ecto-sp13_S_contig16438.4641.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16438 778..3540 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462864.318181-CDS-Ecto-sp13_S_contig16438:777..8611681462864.318181-CDS-Ecto-sp13_S_contig16438:777..861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 778..861 -
1681462864.3411295-CDS-Ecto-sp13_S_contig16438:1013..10951681462864.3411295-CDS-Ecto-sp13_S_contig16438:1013..1095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 1014..1095 -
1681462864.3508465-CDS-Ecto-sp13_S_contig16438:1689..18181681462864.3508465-CDS-Ecto-sp13_S_contig16438:1689..1818Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 1690..1818 -
1681462864.358923-CDS-Ecto-sp13_S_contig16438:2402..24731681462864.358923-CDS-Ecto-sp13_S_contig16438:2402..2473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 2403..2473 -
1681462864.3669844-CDS-Ecto-sp13_S_contig16438:2845..30041681462864.3669844-CDS-Ecto-sp13_S_contig16438:2845..3004Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 2846..3004 -
1681462864.3750472-CDS-Ecto-sp13_S_contig16438:3128..32391681462864.3750472-CDS-Ecto-sp13_S_contig16438:3128..3239Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 3129..3239 -
1681462864.3832247-CDS-Ecto-sp13_S_contig16438:3483..35401681462864.3832247-CDS-Ecto-sp13_S_contig16438:3483..3540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16438 3484..3540 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462864.3914201-UTR-Ecto-sp13_S_contig16438:3540..35521681462864.3914201-UTR-Ecto-sp13_S_contig16438:3540..3552Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16438 3541..3552 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16438.4641.1

>prot_Ecto-sp13_S_contig16438.4641.1 ID=prot_Ecto-sp13_S_contig16438.4641.1|Name=mRNA_Ecto-sp13_S_contig16438.4641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEV
LLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPT
DESWPDRTELPDWSLYAKAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDP
SKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLR
RKEAEAKVQEVRAAAANRPLEADAKPSDRW*
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mRNA from alignment at Ecto-sp13_S_contig16438:778..3552-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16438.4641.1 ID=mRNA_Ecto-sp13_S_contig16438.4641.1|Name=mRNA_Ecto-sp13_S_contig16438.4641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2775bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16438:778..3552- (Ectocarpus species13 EcNAP12_S_4_19m)
TCCACACAGGTTATGCATCGGGACCTCAAACTGGCCAACATGCTCATCGG TGCGGATGGCATTCTCAAGGTGGGTTGTCGACAGCTTGTATCTGAGGAGA AAATCAGCGGGCCAGGTGTTGCGACAGCAGTTGATCATTCGTTCATTTGC AGCGAGGATTGAACCATCTTCTCCCCACAGCGAATCAGCGAGAACGTGGA GCGCCGGTTCTATTCTTTCCTGAATCACGATTTGTTCGGGACAGCATGCG TTGTGAGCAATGGATCTAATAAAAGCTACGTTATCATCCTGTGATCCTCA TCATCCCGACCAGGTTGGCGACTGGGGACTGGCCCGTTCGTTCCACGACA ACCAGACGAAGCACACTCCCACCGTCATCACCCTTTGGTACAGACCTCCG GAGGTTTTGCTGCGCACCACCAGGGTGAGTTACGGAAGAGTTTCGCTATT TTTCAAATGCACAGGTTGCGTCCAAAACGGTTCTCTGCCACTGGGAGACA CCCGTCCAAAAAATCTCATCGCCAGGTTTTAACCCTCTTCAAACGCAGTA TGGCCCTGCTGTGGATATGTGGTCTGTCGGGTGTATCCTTGCCGAGCTCC TGTACGAGAGCCCGATTCTACCAGGAACACATGAGAAGGAGCAGCTGAAC TTGATTTATTCGCTGTGTGGAACGCCGACGGATGAGTCATGGCCAGATCG CACGGAGGTGAGGGTTTTCGGTGTTGTTGCATAGGTCAAATTATTGCCAG GTTCAGCCATAACATCTGTGAACAAGTTTCAATGGCAGCAACGTGTCGCA GCGTTAGATACAAATCAGTGGGGGGGCATCAATAACTCGGTCACTTTTGT TGTGTGTTGGTATGCGACTAAAAATGCAGGTTATGAACGGTTTGATGAGC GGTCGGGGAGTGAGTGTCACCGTCGTGTGACGTACACTGGCAAACACGGC GCAGGTTCACATGCCTGCTTGGCTCCGGGCAGTCTTACTTAGACCTTGAC AAGGGACGCTGTGCCTTCATTTTCACTCGCGTATTGTTCGTTGTCCCCGT CGTGCTCCTCTTGTTCGCTCCACGCACAGTTGCCGGATTGGTCCCTGTAT GCCAAGGCTGCGGAAGAGCACAAACCAAGGTCTATTCAATCGAAATTTAG GTATGTATGTCCTCGTTCGCGTGGAATTAATTGGCTTCGTATGTCCTCTT ACTAGAGCATGCTACTTCTCAGCAACTTTGCACGAGTGAGGCACTTTCTC GCGCGTGCACTGATCTTACATCAGTACCTGTCTCACTCTGGGAGTTCAGC TCAATGCGCACAGGTGTGCTCATCACGTCTCAGTCTCGAGAGGTGCGATA AAATTTGTTGCATTTGACTTTTTTTATTCATGTAGTCCAAGGATAAACTC AAAAACTGAGGTATCGAAAATTTTGCAACTTCATGAATCTTCAGTTAATG ACGTGCTTTTGTGGGGAGTTCAGCTCAATGCGCACAGGTGTGCTCATCAC GTCTCAGTCTCGAGAGGTGCGATAAAGTTTGTTGCATTTGACTTTTTTTA TTCATGTAGTCCAAGGATAAACTCAAAAACTGAGGTATCGAAAATTTTGC AACTTCATGAATCTTCAGTTAATGACGTGCTTTTGTGGGCCGCGCGCCGT GTGATCCTGCTCCCCCGCTCTGCATGGAATCGACCGTGCACTCAACTACT CTCTGTCGATGTTTGTCTTCCGACCTCTGGGCAGATTCGACCGATTGGGT GTGGATTTGGTGGACAAGCTTCTCACCCTCGATCCTTCAAAGCGATTATC AGCGGCAGAGGCCTTAGACCACCCTTATTTCTGGCATGATCCTCGCGTGG TCCAGCCATCAGAGTAAGTGGGGAGCGGTATTCACTGGTCAGAAATTTCT GACTGGAGCCATCTCACGTCCACGAAGGGATACAGCAGTATGGCAATATT CTTCCACAGTGCGCCCCGGTTTTCTAGCAGCACGTAGCATGGAGGCGTTA GACAGAGCTTGTATCGAAGTAGTGAACGACTTAACCGGAGGGGGGAGGAT AGGCATCGAAGCGCAGGAAGTTAGCACAACCGGAGGACATGAAAGCGGCC GAGGAGAGTAGGAGAGAGATGGCAGAGGAAATAACAAGATGTGTACCGGA CAGAATGTGGTGGAGGTGGCAGTAGTACGCCACAATCCTTCGTTTTGTCA ATGCTACTTATCGATGTGGCGTATATCCTCATGTCGGTTTGCGATTTGGT ATGCCTGAATATTTGACACAAGGCTGGAAGCCTTTCGTGTGTCGGCGTGC ATCGGGGCCGAGTCTAGCCGGCGAAAACCTGGCTTGCACCTGTAGCGTAG TTTGTAGAGACGTGGGATATACAGGAGTTTGTGTGTTCTTTTTCGAACGG AATGTACGTTGGCCTTGATGTTGACACGTCTCCACGCTCGGTGTTGGTCC TTTCCAGGCTATCAAAGTTCGCCATACACTCGTGTCACGAATTTGAGGTC AAGAAGGTGAAGGAGAAGGAGCGACTAAGGCGGAAAGAGGTACGAACCCA GCCTCTTCCCGTTTTCGTGATGTCACTGTCGTACTCTTAGGGATACCTTT GTATTGTGTGTGACAGCGTGTTTTATCAATAAGTCTTGGTTTTGTCCTGT TTTCGAACACTTGATCATTTCTTCTAACTCAACGCCTGCAGGCGGAGGCA AAAGTCCAAGAGGTGAGGGCAGCGGCAGCCAATCGACCCTTGGAAGCTGA TGCAAAGCCTAGCGACAGGTGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16438:778..3552-

>mRNA_Ecto-sp13_S_contig16438.4641.1 ID=mRNA_Ecto-sp13_S_contig16438.4641.1|Name=mRNA_Ecto-sp13_S_contig16438.4641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16438:778..3552- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCGGGACCTCAAACTGGCCAACATGCTCATCGGTGCGGATGGCAT
TCTCAAGGTTGGCGACTGGGGACTGGCCCGTTCGTTCCACGACAACCAGA
CGAAGCACACTCCCACCGTCATCACCCTTTGGTACAGACCTCCGGAGGTT
TTGCTGCGCACCACCAGGTATGGCCCTGCTGTGGATATGTGGTCTGTCGG
GTGTATCCTTGCCGAGCTCCTGTACGAGAGCCCGATTCTACCAGGAACAC
ATGAGAAGGAGCAGCTGAACTTGATTTATTCGCTGTGTGGAACGCCGACG
GATGAGTCATGGCCAGATCGCACGGAGTTGCCGGATTGGTCCCTGTATGC
CAAGGCTGCGGAAGAGCACAAACCAAGGTCTATTCAATCGAAATTTAGAT
TCGACCGATTGGGTGTGGATTTGGTGGACAAGCTTCTCACCCTCGATCCT
TCAAAGCGATTATCAGCGGCAGAGGCCTTAGACCACCCTTATTTCTGGCA
TGATCCTCGCGTGGTCCAGCCATCAGAGCTATCAAAGTTCGCCATACACT
CGTGTCACGAATTTGAGGTCAAGAAGGTGAAGGAGAAGGAGCGACTAAGG
CGGAAAGAGGCGGAGGCAAAAGTCCAAGAGGTGAGGGCAGCGGCAGCCAA
TCGACCCTTGGAAGCTGATGCAAAGCCTAGCGACAGGTGGTGA
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