prot_Ecto-sp13_S_contig16418.4632.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig16418.4632.1
Unique Name	prot_Ecto-sp13_S_contig16418.4632.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	163

Homology

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: D7FN25_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN25_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 2.230e-111
Identity = 157/162 (96.91%), Postives = 160/162 (98.77%), Query Frame = 0

Query:    1 MGILDGVPLFLAKAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWEAAANR 162
            M ILDGVPLFLAKAGAA+PPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQA+IVFISSDRSEE QRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTM+GVDDVNQAGAGAVDRWEAAANR
Sbjct:    1 MSILDGVPLFLAKAGAATPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQADIVFISSDRSEELQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMNGVDDVNQAGAGAVDRWEAAANR 162

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6PHW4_PEROL (Thioredoxin domain-containing protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6PHW4_PEROL)

HSP 1 Score: 105 bits (261), Expect = 1.240e-25
Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 0

Query:   14 AGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQAN---IVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRW 156
            A +A    L   ++ L+F++ WCPDC+ F P++ + ++  K   ++   I+F+SSD+SE  Q  Y +  + ADW  V + D   RA LK+ +G CA  E+  +GMS S RK GIPTL V   +   +   D   D+ + GA AVDRW
Sbjct:   20 AVSADEVMLKKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNSDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRW 165

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5KGG7_PERM5 (Thioredoxin, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KGG7_PERM5)

HSP 1 Score: 102 bits (255), Expect = 9.900e-25
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0

Query:   22 LNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRW 156
            L   ++ L+F++ WCPDC+ F P++ + ++  K   P +  I+F+SSD+SE  Q  Y    +  DW  V F D   RA LK+ +G CA  E+  +G+S S RK GIPTL V   +   +   D   D+ + G  AVDRW
Sbjct:   28 LKKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQIAYHRNDM-PDWLRVPFNDKRTRATLKKEYGVCAKKEMEDIGISDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGEAAVDRW 165

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6LHT8_PEROL (Thioredoxin domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LHT8_PEROL)

HSP 1 Score: 103 bits (257), Expect = 7.350e-24
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0

Query:   14 AGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWEAAAN 161
            A +A    L   ++ L+F++ WCPDC+ F P++ + ++  K   P +  I+F+SSD+SE  Q  Y +  + ADW  V + D   RA LK+ +G CA  E+  +GMS S RK GIPTL V   +   +   D   D+ + GA AVDR  A  +
Sbjct:   20 AVSADEVMLEKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRLFAVVS 170

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6LK23_PERCH (Thioredoxin domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LK23_PERCH)

HSP 1 Score: 102 bits (255), Expect = 1.820e-23
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 0

Query:   13 KAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDR 155
             A +A    L   ++ L+F++ WCPDC  F P+L + ++  K   P +  IVF+SSD+SE  Q  Y +  + ADW  V F D   RA LK+ +G CA  E+  LGMS S RK GIPTL V   +   +   D   D+ + G  AV+R
Sbjct:   17 SAVSADDVMLKKDIIALYFAAHWCPDCTAFTPTLNKFYEDVKAKDPNKLEIVFVSSDKSENEQVAYHQNDM-ADWLRVPFNDKRTRAMLKKEYGVCAKKEMDDLGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGTDIEKYGDAAVER 162

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5LF95_PERM5 (Thioredoxin, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LF95_PERM5)

HSP 1 Score: 95.5 bits (236), Expect = 6.610e-22
Identity = 58/136 (42.65%), Postives = 73/136 (53.68%), Query Frame = 0

Query:   27 LCLFFSSQWCPDCVRFVPSLVEAFKGFKP----GQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVD-RW 156
            + L+FS+ WCP C +F P L E ++  K      +  I+FISSD SEE Q  Y +E  H DW  V + D E R  LK+ FG CAG E   LG+   D K GIP L V       +   DGV+DV   G  AVD +W
Sbjct:   29 IALYFSAHWCPPCRKFTPILKEFYEEVKEEDGEDKLEIIFISSDNSEEEQVEYHKED-HGDWLRVPYSDVETRDALKKEFGVCAGIEKENLGIINDDHKSGIPCLLVLDEDKRSVKVFDGVNDVKTMGPVAVDMKW 163

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A3M6VF28_9STRA (Thioredoxin domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF28_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.130e-21
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 0

Query:    3 ILDGVPLFLAKAGAASPPSL--NAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWE 157
            +L G+ L  A+  + S  +L  N  +L L+F++ WCPDC  F P L   ++    G  ++VF+ SD S + Q  + +      W  V+FDGE R  LKRR+G CA +EVT L  SP  RKGGIPTL V R  +G ++     D + + G   +  W+
Sbjct:    5 LLHGITLTNAQNESISGETLGQNDKVLALYFAADWCPDCRAFQPILNRFYETTCNG-LDLVFVGSDASAKDQLAHFKN-KQGPWWMVSFDGETRTQLKRRYGICAAAEVTEL--SPIIRKGGIPTLVVIR-HNGEVVDFYAADKIERDGVKVLAEWQ 156

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: W2PLE8_PHYPN (Thioredoxin domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2PLE8_PHYPN)

HSP 1 Score: 91.7 bits (226), Expect = 3.960e-20
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 0

Query:   26 LLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWE 157
            +L L+F++ WCPDC  F P+    ++  K    ++VF+ SD S + Q  +  +     W  V F+GE R  LKR+FG CAG+EV+ L   P  RKGGIPTL V R  DG ++     D + + G  A+  W+
Sbjct:   63 VLALYFAADWCPDCRAFQPAFNRFYETAKDN-LDVVFVGSDASAKDQLAHFTD-KQGPWWMVPFEGETRTLLKRKFGVCAGAEVSEL--RPITRKGGIPTLVVIRP-DGEVVDFHAADKIERDGIKALAAWQ 189

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: B7GDA0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDA0_PHATC)

HSP 1 Score: 91.3 bits (225), Expect = 4.520e-20
Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 0

Query:   23 NAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQ-ANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDG-EHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDV 145
             AP+L LFFS+ WCPDCV F+P L+EAF   +P     +V++SSD SE A    ME     ++  V FD  + R+++KR +GACA  E+  L ++   RK GIP + +  A  G +L   G +D+
Sbjct:   43 QAPVLALFFSAGWCPDCVAFLP-LIEAFAQSQPENLVRVVYVSSDESEAA----MEAFKPKNFAFVPFDNTQERSNMKRHYGACARKEMADLEITAEQRKHGIPAVILIEAQTGKILHESGAEDL 162

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BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5KCM9_PERM5 (Thioredoxin, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KCM9_PERM5)

HSP 1 Score: 92.0 bits (227), Expect = 1.380e-18
Identity = 55/133 (41.35%), Postives = 70/133 (52.63%), Query Frame = 0

Query:   27 LCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQAN----IVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVD 154
            + L+FS+ WCP C +F P L E ++  K  +      I+FISSD SEE Q  Y +E  H  W  V + D E R  LK+ FG CAG E   LG+   D K GIP L +       +   DGV+DV   G  AVD
Sbjct:   29 IALYFSAHWCPPCRKFTPVLKEFYEEVKEEEGEDKLEIIFISSDNSEEEQVEYHKED-HGGWLRVPYSDVETRDALKKEFGVCAGIEKENLGIINDDHKSGIPCLLILDEDKRSVKVFDGVNDVKTMGPVAVD 160

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN25_ECTSI	2.230e-111	96.91	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A7J6PHW4_PEROL	1.240e-25	38.10	Thioredoxin domain-containing protein n=2 Tax=Perk...	[more]
C5KGG7_PERM5	9.900e-25	38.13	Thioredoxin, putative n=2 Tax=Perkinsus marinus (s...	[more]
A0A7J6LHT8_PEROL	7.350e-24	37.50	Thioredoxin domain-containing protein n=3 Tax=Perk...	[more]
A0A7J6LK23_PERCH	1.820e-23	39.46	Thioredoxin domain-containing protein n=1 Tax=Perk...	[more]
C5LF95_PERM5	6.610e-22	42.65	Thioredoxin, putative n=1 Tax=Perkinsus marinus (s...	[more]
A0A3M6VF28_9STRA	1.130e-21	37.58	Thioredoxin domain-containing protein n=1 Tax=Pero...	[more]
W2PLE8_PHYPN	3.960e-20	38.64	Thioredoxin domain-containing protein n=6 Tax=Phyt...	[more]
B7GDA0_PHATC	4.520e-20	40.80	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
C5KCM9_PERM5	1.380e-18	41.35	Thioredoxin, putative n=1 Tax=Perkinsus marinus (s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012336	Thioredoxin-like fold	PFAM	PF13905	Thioredoxin_8	coord: 27..134 e-value: 8.7E-17 score: 61.2
None	No IPR available	GENE3D	3.40.30.10		coord: 18..158 e-value: 2.3E-20 score: 74.6
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 4..154
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..162 score: 8.551
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 26..144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16418	contig	Ecto-sp13_S_contig16418:413..3324 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16418.4632.1	mRNA_Ecto-sp13_S_contig16418.4632.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig16418 413..3918 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig16418.4632.1 ID=prot_Ecto-sp13_S_contig16418.4632.1|Name=mRNA_Ecto-sp13_S_contig16418.4632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MGILDGVPLFLAKAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAF
KGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRR
FGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGA
GAVDRWEAAANR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf