mRNA_Ecto-sp13_S_contig16418.4632.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: D7FN25_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN25_ECTSI) HSP 1 Score: 322 bits (825), Expect = 4.220e-108 Identity = 157/162 (96.91%), Postives = 160/162 (98.77%), Query Frame = 1
Query: 1 MGILDGVPLFLAKAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWEAAANR 486
M ILDGVPLFLAKAGAA+PPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQA+IVFISSDRSEE QRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTM+GVDDVNQAGAGAVDRWEAAANR
Sbjct: 1 MSILDGVPLFLAKAGAATPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQADIVFISSDRSEELQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMNGVDDVNQAGAGAVDRWEAAANR 162
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6PHW4_PEROL (Thioredoxin domain-containing protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6PHW4_PEROL) HSP 1 Score: 105 bits (261), Expect = 1.530e-23 Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 40 AGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQAN---IVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRW 468
A +A L ++ L+F++ WCPDC+ F P++ + ++ K ++ I+F+SSD+SE Q Y + + ADW V + D RA LK+ +G CA E+ +GMS S RK GIPTL V + + D D+ + GA AVDRW
Sbjct: 20 AVSADEVMLKKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNSDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRW 165
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5KGG7_PERM5 (Thioredoxin, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KGG7_PERM5) HSP 1 Score: 102 bits (255), Expect = 1.120e-22 Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 64 LNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRW 468
L ++ L+F++ WCPDC+ F P++ + ++ K P + I+F+SSD+SE Q Y + DW V F D RA LK+ +G CA E+ +G+S S RK GIPTL V + + D D+ + G AVDRW
Sbjct: 28 LKKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQIAYHRNDM-PDWLRVPFNDKRTRATLKKEYGVCAKKEMEDIGISDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGEAAVDRW 165
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6LHT8_PEROL (Thioredoxin domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LHT8_PEROL) HSP 1 Score: 103 bits (257), Expect = 8.720e-22 Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = 1
Query: 40 AGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDR 465
A +A L ++ L+F++ WCPDC+ F P++ + ++ K P + I+F+SSD+SE Q Y + + ADW V + D RA LK+ +G CA E+ +GMS S RK GIPTL V + + D D+ + GA AVDR
Sbjct: 20 AVSADEVMLEKDIVALYFAAHWCPDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDR 164
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A7J6LK23_PERCH (Thioredoxin domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LK23_PERCH) HSP 1 Score: 103 bits (256), Expect = 1.530e-21 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 37 KAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFK---PGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDR 465
A +A L ++ L+F++ WCPDC F P+L + ++ K P + IVF+SSD+SE Q Y + + ADW V F D RA LK+ +G CA E+ LGMS S RK GIPTL V + + D D+ + G AV+R
Sbjct: 17 SAVSADDVMLKKDIIALYFAAHWCPDCTAFTPTLNKFYEDVKAKDPNKLEIVFVSSDKSENEQVAYHQNDM-ADWLRVPFNDKRTRAMLKKEYGVCAKKEMDDLGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGTDIEKYGDAAVER 162
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5LF95_PERM5 (Thioredoxin, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LF95_PERM5) HSP 1 Score: 95.5 bits (236), Expect = 5.510e-20 Identity = 58/136 (42.65%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 79 LCLFFSSQWCPDCVRFVPSLVEAFKGFKP----GQANIVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVD-RW 468
+ L+FS+ WCP C +F P L E ++ K + I+FISSD SEE Q Y +E H DW V + D E R LK+ FG CAG E LG+ D K GIP L V + DGV+DV G AVD +W
Sbjct: 29 IALYFSAHWCPPCRKFTPILKEFYEEVKEEDGEDKLEIIFISSDNSEEEQVEYHKED-HGDWLRVPYSDVETRDALKKEFGVCAGIEKENLGIINDDHKSGIPCLLVLDEDKRSVKVFDGVNDVKTMGPVAVDMKW 163
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: A0A3M6VF28_9STRA (Thioredoxin domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF28_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 9.080e-20 Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 7 ILDGVPLFLAKAGAASPPSL--NAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWE 471
+L G+ L A+ + S +L N +L L+F++ WCPDC F P L ++ G ++VF+ SD S + Q + + W V+FDGE R LKRR+G CA +EVT L SP RKGGIPTL V R +G ++ D + + G + W+
Sbjct: 5 LLHGITLTNAQNESISGETLGQNDKVLALYFAADWCPDCRAFQPILNRFYETTCNG-LDLVFVGSDASAKDQLAHFKN-KQGPWWMVSFDGETRTQLKRRYGICAAAEVTEL--SPIIRKGGIPTLVVIR-HNGEVVDFYAADKIERDGVKVLAEWQ 156
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: W2PLE8_PHYPN (Thioredoxin domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2PLE8_PHYPN) HSP 1 Score: 91.7 bits (226), Expect = 2.790e-18 Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 76 LLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVDRWE 471
+L L+F++ WCPDC F P+ ++ K ++VF+ SD S + Q + + W V F+GE R LKR+FG CAG+EV+ L P RKGGIPTL V R DG ++ D + + G A+ W+
Sbjct: 63 VLALYFAADWCPDCRAFQPAFNRFYETAKDN-LDVVFVGSDASAKDQLAHFTD-KQGPWWMVPFEGETRTLLKRKFGVCAGAEVSEL--RPITRKGGIPTLVVIRP-DGEVVDFHAADKIERDGIKALAAWQ 189
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: B7GDA0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDA0_PHATC) HSP 1 Score: 91.3 bits (225), Expect = 3.120e-18 Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 67 NAPLLCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQ-ANIVFISSDRSEEAQRRYMEEVLHADWPAVTFDG-EHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDV 435
AP+L LFFS+ WCPDCV F+P L+EAF +P +V++SSD SE A ME ++ V FD + R+++KR +GACA E+ L ++ RK GIP + + A G +L G +D+
Sbjct: 43 QAPVLALFFSAGWCPDCVAFLP-LIEAFAQSQPENLVRVVYVSSDESEAA----MEAFKPKNFAFVPFDNTQERSNMKRHYGACARKEMADLEITAEQRKHGIPAVILIEAQTGKILHESGAEDL 162
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Match: C5KCM9_PERM5 (Thioredoxin, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KCM9_PERM5) HSP 1 Score: 92.4 bits (228), Expect = 1.250e-16 Identity = 55/133 (41.35%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 79 LCLFFSSQWCPDCVRFVPSLVEAFKGFKPGQAN----IVFISSDRSEEAQRRYMEEVLHADWPAVTF-DGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMDGVDDVNQAGAGAVD 462
+ L+FS+ WCP C +F P L E ++ K + I+FISSD SEE Q Y +E H W V + D E R LK+ FG CAG E LG+ D K GIP L + + DGV+DV G AVD
Sbjct: 29 IALYFSAHWCPPCRKFTPVLKEFYEEVKEEEGEDKLEIIFISSDNSEEEQVEYHKED-HGGWLRVPYSDVETRDALKKEFGVCAGIEKENLGIINDDHKSGIPCLLILDEDKRSVKVFDGVNDVKTMGPVAVD 160 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16418.4632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16418.4632.1 >prot_Ecto-sp13_S_contig16418.4632.1 ID=prot_Ecto-sp13_S_contig16418.4632.1|Name=mRNA_Ecto-sp13_S_contig16418.4632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp MGILDGVPLFLAKAGAASPPSLNAPLLCLFFSSQWCPDCVRFVPSLVEAFback to top mRNA from alignment at Ecto-sp13_S_contig16418:413..3918+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16418.4632.1 ID=mRNA_Ecto-sp13_S_contig16418.4632.1|Name=mRNA_Ecto-sp13_S_contig16418.4632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16418:413..3918+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16418:413..3918+ >mRNA_Ecto-sp13_S_contig16418.4632.1 ID=mRNA_Ecto-sp13_S_contig16418.4632.1|Name=mRNA_Ecto-sp13_S_contig16418.4632.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=489bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16418:413..3918+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |