prot_Ecto-sp13_S_contig16417.4631.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16417.4631.1
Unique Nameprot_Ecto-sp13_S_contig16417.4631.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.210e-39
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0
Query:    1 MGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQEKWATLVFNDFVTFTSNKC 69
            MGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGG GGAIFQEKWATLVFNDFVTFTSNKC
Sbjct:  191 MGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKC 259          
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.220e-11
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    3 KLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQEKWATLVFNDFVTFTSN 67
            KLTM DNEAD +F G  GGAI+NRG+IVV+GE+ F+ N    GG I+Q    T+ FN   TF+ N
Sbjct:  203 KLTMKDNEADGFFEGI-GGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSEN 266          
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.070e-10
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    3 KLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQEKWATLVFNDFVTFTSN 67
            KLTM DNEA+ +F G  GGAI+NRG+I+VDGE+ F+ N    GG I+Q     + FN   TF+ N
Sbjct:  203 KLTMKDNEAEGFFEGL-GGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSEN 266          
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.210e-9
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    3 KLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQEKWATLVFNDFVTFTSN 67
            KLTM DN+AD  F G  GGAI+NRG+I+V+G + F+ N   +GG I Q    T+ FN   TF+ N
Sbjct:   88 KLTMKDNQADANFAGL-GGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSEN 151          
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.040e-7
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    6 MTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQEKWATLVFNDFVTFTSN 67
            M +N+ D  +GG  GGAI+NRG+I V+GE+ F+ N    GG I+Q     + FN   TF  N
Sbjct:    1 MNENDTDGQYGGL-GGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHN 61          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16417.4631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KTD4_9PHAE4.210e-3998.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLJ6_ECTSI2.220e-1153.85Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI1.070e-1050.77Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI3.210e-949.23Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI5.040e-743.55Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16417contigEcto-sp13_S_contig16417:1857..3291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16417.4631.1mRNA_Ecto-sp13_S_contig16417.4631.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16417 577..3291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16417.4631.1 ID=prot_Ecto-sp13_S_contig16417.4631.1|Name=mRNA_Ecto-sp13_S_contig16417.4631.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
MGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGSGGAIFQ
EKWATLVFNDFVTFTSNKC
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