mRNA_Ecto-sp13_S_contig16400.4620.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: D7FLC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC2_ECTSI) HSP 1 Score: 330 bits (846), Expect = 1.110e-102 Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 2
Query: 1742 VFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS 2224
VFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGR+D+SLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS
Sbjct: 91 VFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRIDSSLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS 251
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A6H5JBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW5_9PHAE) HSP 1 Score: 307 bits (787), Expect = 1.290e-95 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 2
Query: 1778 MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS 2224
MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS
Sbjct: 1 MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPPVAS 149
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A383W0Z3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W0Z3_TETOB) HSP 1 Score: 150 bits (378), Expect = 5.130e-37 Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 2
Query: 1688 PSYCYRKSCCSIYGQ--------TRQVFNVGEDA-KRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEV--DGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSD-GLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPV 2209
P+Y Y GQ ++ + DA K G + +MA ++ L + WFVTG VD LFS+ F F D V+ TG+ YA GV KLF+Q S+ ++IS E D + +VV WRL GR+NLPF P IKPY+VTTT D D GL+ +Q DEFS+ GWD+LL ++ G FGA PAPPV
Sbjct: 37 PAYAYSDPVNQFLGQFLPSNRAAKDELAGIDFDAPKLSGRSIQQMAELVEAGLSRSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELISVEARPDTQALVVVWRLEGRVNLPFKPKIKPYVVTTTLGLDPDSGLICSQLDEFSVPGWDLLL-SILLGEGFGAKPAPPV 221
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A250WW06_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WW06_9CHLO) HSP 1 Score: 146 bits (369), Expect = 2.210e-36 Identity = 75/150 (50.00%), Postives = 97/150 (64.67%), Query Frame = 2
Query: 1766 KRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGED--IVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPV 2209
K G+ ++A ++ L + WFVTG VD SLF++ F F D V+ G+ YAEGV K+F+QE SR +V+S + D IVV WRL G +NLPF P I PY+VTTTFE DSDGL+S+Q DEFS+ GW +L A+ G G PA PV
Sbjct: 46 KATGLEIRQLADRIEAKLSMSEWFVTGMVDPSLFAKEFSFKDDSVATKGIRSYAEGVRKIFDQETSRAEVVSVDTDAAKGIIVVTWRLEGCVNLPFKPRITPYVVTTTFEVDSDGLISSQLDEFSVPGWRLLAGALL-GSWAGPTPALPV 194
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A7J7PWC3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWC3_9CHLO) HSP 1 Score: 145 bits (366), Expect = 3.180e-35 Identity = 81/186 (43.55%), Postives = 104/186 (55.91%), Query Frame = 2
Query: 1688 PSYCYRKSCCSIYGQTRQVFNVGEDA---------KRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGED--IVVNWRLSGRINLPFNPPIKPYIVTTTFERD-SDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPV 2209
P+Y Y GQ +D K G + EMA ++ L + WFVTG VD LFS+ F F D V+ TG+ YA GV KLF+Q S+ ++++ E D IVV WRL GR+NLPF P IK Y+VTTT D GL+++Q DEFS+ GWD+LL + G FGA PAPPV
Sbjct: 58 PAYAYSDPVNQFLGQFLPSNRAAKDELVGVDFDQPKLSGRSIQEMAQLVEAGLSKSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELVTVEPQPADQAIVVTWRLEGRVNLPFKPKIKAYVVTTTLGVDPGTGLINSQVDEFSVPGWDLLLSTLL-GEGFGAKPAPPV 242
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A7S3ZJJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJJ4_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.770e-33 Identity = 71/141 (50.35%), Postives = 89/141 (63.12%), Query Frame = 2
Query: 1751 VGEDAKRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFP 2173
V D + + GE+ ALD LR WFVTG+V FS+ F F DP VSLTG+ YAEGVA+LF E++RC+VI+ GE+I V+WRLSG + + IKPY+V TTF R DGL+ Q D FSI GW ILL + P
Sbjct: 97 VDWDQPKTPLPLGELVGALDRGLREREWFVTGKVLPEYFSDDFKFEDPDVSLTGIQNYAEGVARLFG-EDARCEVIACAPRGEEIAVDWRLSGSVRVGPGATIKPYVVHTTF-RVRDGLVVFQEDAFSIPGWQILLGVLLP 235
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A7S2KK02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KK02_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.780e-30 Identity = 76/163 (46.63%), Postives = 95/163 (58.28%), Query Frame = 2
Query: 1790 EMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTE----------------VDGEDIV----VNWRLSGRINL-PFNPP-IKPYIVTTTFE-RDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPV 2209
EM LD +R N WFVTG+V + LF++ FFF DP V L G++KYA+GV +LF+Q SR +VIS E +D + V V WRLSG +N+ PF IKPYI + R+ DGL+ Q D F I GWDILL A+ P PF A PAPPV
Sbjct: 123 EMVKRLDAGIRENEWFVTGKVMSELFADDFFFKDPDVQLRGIEKYADGVNRLFDQNTSRVEVISCELNPAITDTVNKEVGVSIDDDKFVQVVTVEWRLSGNVNIGPFGGLFIKPYICYSDLHVRNVDGLIVYQEDRFDIPGWDILLSAIAPWLPFLAPPAPPV 285
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A0G4I8F7_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8F7_9ALVE) HSP 1 Score: 130 bits (328), Expect = 5.320e-30 Identity = 68/140 (48.57%), Postives = 90/140 (64.29%), Query Frame = 2
Query: 1763 AKRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGED--IVVNWRLSGRINLPFNPPIKPYIVTTTFERD-SDGLLSTQRDEFSIAGWDILLHAVFP 2173
+KR+ M +A L++AL+ + WFVTGRVD S FSE F F DP V + G++ YA+GV K+F+QE SR +VI T V + I V WRL G++N+ IKPY+V T F D GL+ +Q D FSI +DILL A FP
Sbjct: 114 SKRKKMPLNRLAQELEKALQRSEWFVTGRVDPSFFSENFSFEDPDVKVKGIEDYAKGVNKIFDQETSRAEVIETTVKSANNTITVTWRLEGKVNVGPGLRIKPYLVYTDFGVDPKSGLIVSQLDRFSIPSYDILLSAFFP 253
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: K0RB30_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RB30_THAOC) HSP 1 Score: 130 bits (328), Expect = 5.450e-30 Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 2
Query: 1742 VFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDG---EDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSD-GLLSTQRDEFSIAGWDILLHAVFP 2173
V + DA + ++ ++A+ALD L + WFVTG ++ F++ F F DP V LTGV++YA GV KLF+Q+ SR ++IST V+ I V WRLSG +++ IKPYI T F D D GL+ Q D FSI GWDILL AVFP
Sbjct: 90 VSEIDFDAPKVKLSIEDLAAALDFELYNREWFVTGLINPIYFADDFQFQDPDVKLTGVEEYARGVNKLFDQDTSRAEIISTVVNATVPNTITVTWRLSGGVSIGPGLEIKPYICYTDFTVDEDTGLIVFQEDRFSIPGWDILLSAVFP 237
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Match: A0A7S0E962_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E962_9CRYP) HSP 1 Score: 126 bits (316), Expect = 7.710e-30 Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 2
Query: 1736 RQVFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDG---EDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDS-DGLLSTQRDEFSIAGWDILLHAVF 2170
R + + E +K+ G++ EM L E L WFVTG V LFS F F DP V L+G+D YA GV +LF+Q+ SR +++ V+G + I V WRL G++N+ IKPY+V+T GL+ Q+D FS+ GWDI L A+F
Sbjct: 11 RVLEDKSEASKKTGLSIEEMCDVLSEELVKREWFVTGDVPRELFSSDFTFEDPDVKLSGIDNYARGVRRLFDQQTSRAEIVFCRVNGTKPDTITVVWRLEGKVNVGLGLKIKPYVVSTDLRVSPVTGLIEYQQDRFSLPGWDIFLSALF 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16400.4620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16400.4620.1 >prot_Ecto-sp13_S_contig16400.4620.1 ID=prot_Ecto-sp13_S_contig16400.4620.1|Name=mRNA_Ecto-sp13_S_contig16400.4620.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAback to top mRNA from alignment at Ecto-sp13_S_contig16400:2..3923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16400.4620.1 ID=mRNA_Ecto-sp13_S_contig16400.4620.1|Name=mRNA_Ecto-sp13_S_contig16400.4620.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3922bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16400:2..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16400:2..3923+ >mRNA_Ecto-sp13_S_contig16400.4620.1 ID=mRNA_Ecto-sp13_S_contig16400.4620.1|Name=mRNA_Ecto-sp13_S_contig16400.4620.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=450bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16400:2..3923+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |