prot_Ecto-sp13_S_contig164.4617.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig164.4617.1
Unique Nameprot_Ecto-sp13_S_contig164.4617.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length253
Homology
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 8.720e-161
Identity = 239/253 (94.47%), Postives = 245/253 (96.84%), Query Frame = 0
Query:    1 QVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGANAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALMRIAILGYLEHFAAQREDDEDDVDVEMGHAAKGAAKARAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVVVLASHMLLQLWLYRASRSDASSATWQLLLRSTTA 253
            +VRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQ A+AIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGAL+RIAILGYL+HFAAQRED+EDD DVEMGHAAK AAKA+AKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVV LASHMLLQLWLYR SRSDASSA  QLLLR TTA
Sbjct:  254 EVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQEASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALIRIAILGYLDHFAAQREDNEDDADVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVVALASHMLLQLWLYRTSRSDASSARRQLLLRGTTA 506          
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 2.520e-147
Identity = 222/236 (94.07%), Postives = 229/236 (97.03%), Query Frame = 0
Query:    1 QVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGANAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALMRIAILGYLEHFAAQREDDEDDVDVEMGHAAKGAAKARAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVVVLASHMLLQLWLYRASR 236
            +VRLQLR EFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGA+AIVHWVHPWKSLAWF+ALVVMLLHPCLL+VVINGALMRIAI GYLEHFAAQREDDED VDVEMGHAAK AAKA+AKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRR+FAKAGLSPQRQVETIGKALTKVRRRFHPL ATQCLSMVV+L SHMLLQLWLYR SR
Sbjct:  285 EVRLQLRVEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGASAIVHWVHPWKSLAWFVALVVMLLHPCLLMVVINGALMRIAIRGYLEHFAAQREDDEDYVDVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRSFAKAGLSPQRQVETIGKALTKVRRRFHPLGATQCLSMVVILVSHMLLQLWLYRTSR 520          
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.190e-20
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 0
Query:    1 QVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGANAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALMRIAILGYLE 106
            +VRL L ++++EFAE CSH WPEEP +P ++ FSPN++Y   M+  ++ +PY+  ++  +AI  W  P +SL W +A+V ML+ P +LIVV+N ALM IA+  YL+
Sbjct:  233 EVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFKPYVTFLKEVDAINSWGRPRRSLMWMLAVVGMLVVPPVLIVVVNVALMHIAVSAYLK 338          
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Match: D7FL70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL70_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.150e-11
Identity = 86/362 (23.76%), Postives = 134/362 (37.02%), Query Frame = 0
Query:    1 QVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGANAIVHWVHPWK--------------------------------------------------SLAWFIALVVMLLH-----PCLLIV---------VINGALMRIAI-------------------------------LGYLEHFAAQREDDE----------------------------DDVDVEMGHAA---KGAAKARAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVVVLASHMLLQLWLYRASR 236
            +VRL L ++++EFAE CSH WPEEP +P ++ FSPN++Y   M+  ++ +PY+  ++  +AI  W  P K                                                  S   F +L   L+      P    V          +  A   +A+                               +     FAA     +                              V  ++ HAA   KG   + A     K   L P+    D +++ +Y  +  TK++PAVV Q+G+  F K+G S Q  ++ +G  L  +R+RFHPLRA      +  L +HM+LQLWLY + R
Sbjct:  233 EVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFRPYVTFLKEVDAISSWGRPRKRQGGVFGARRIRFDVGQEGGXXXXXXXXXXXQLSMXXXXXXXXXXRSQRKSSTTFFSLSRSLIRGNRGAPIRRRVSDPDPVTANAVGSASAGVALRNSSSAPSRTAPWRAKAPRSAPPSTITTPTTMARTSIFAASSGASQPPSTPRALSISNAAAIDSNNSYTGPGVGSGVSRDVVHAAGVAKGGVISAAGAGSKKIKKLLPVRGTRDPELRELYERLGGTKRVPAVVNQLGKVFFTKSGPSIQLGLDKMGMMLIMIRQRFHPLRARDLGLTMTALFAHMVLQLWLYVSGR 594          
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Match: D7FQN3_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.820e-5
Identity = 22/27 (81.48%), Postives = 26/27 (96.30%), Query Frame = 0
Query:    1 QVRLQLRFEFNEFAETCSHLWPEEPPE 27
            +VRLQLRFEFNE AETCS++WPEEPP+
Sbjct:  207 EVRLQLRFEFNELAETCSYIWPEEPPK 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig164.4617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4V0_ECTSI8.720e-16194.47Protein kinase C, beta 1, like n=1 Tax=Ectocarpus ... [more]
A0A6H5JW30_9PHAE2.520e-14794.07C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A6H5JRL3_9PHAE1.190e-2046.23C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FL70_ECTSI2.150e-1123.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQN3_ECTSI2.820e-581.48C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..231
NoneNo IPR availableTMHMMTMhelixcoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig164contigEcto-sp13_S_contig164:31410..35090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig164.4617.1mRNA_Ecto-sp13_S_contig164.4617.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig164 31410..35090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig164.4617.1 ID=prot_Ecto-sp13_S_contig164.4617.1|Name=mRNA_Ecto-sp13_S_contig164.4617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=253bp
QVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQ
PYIGCMQGANAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALMRIA
ILGYLEHFAAQREDDEDDVDVEMGHAAKGAAKARAKENISKKSLLPPIDA
PEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALT
KVRRRFHPLRATQCLSMVVVLASHMLLQLWLYRASRSDASSATWQLLLRS
TTA
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