mRNA_Ecto-sp13_S_contig164.4614.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: D7G4U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 2.720e-177 Identity = 246/255 (96.47%), Postives = 252/255 (98.82%), Query Frame = 3
Query: 372 MIGAVDANRTGGGVDLSIGPPQSQDSHGAGSSKLPLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSR 1136
MIGAVDANRTG +DLSIGPPQSQDSHGAGSS++PLSPEDI SFE+NGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILW+RAGTTGLTGPELSSAAREALLPAADDD+VETNGDAGDVLLTHPLLLHSR
Sbjct: 1 MIGAVDANRTGEDIDLSIGPPQSQDSHGAGSSEVPLSPEDIRSFEENGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDDVVETNGDAGDVLLTHPLLLHSR 255
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A6H5JRA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA5_9PHAE) HSP 1 Score: 317 bits (812), Expect = 9.060e-100 Identity = 161/194 (82.99%), Postives = 172/194 (88.66%), Query Frame = 3
Query: 111 MDNDHVQPSKKRSFDAISQENPTTPDTPEADSEGGGWQCSPSPHAAGTISTDAEAADRVGQFQTIPPVPHTEDASTGGKETGKCVESMIGAVDANRTGGGVDLSIGPPQSQDSHGAGSSKLPLSPEDIHSFEDNGFVMLKRAFDPDVAAACR---------ESLWKRLKGDGIRREEPATWVRKIGIPEIYGIS 665
MDNDHVQPSKKRSF+AISQENP TPDTPEAD E GGWQCSPSPHAA T TDA+AADRVGQ++TIPPVP EDASTGG++TG+CVESMIGAVDANRT VDLSIGPPQSQDSHGAGSS+LPLSPEDIHSFE+NGFVMLKRAFDPDVAAACR ESLWKRLKGDGIRREEPATW+RK GI EIYGI+
Sbjct: 1 MDNDHVQPSKKRSFNAISQENPPTPDTPEADRERGGWQCSPSPHAAETSFTDADAADRVGQYRTIPPVPRKEDASTGGRKTGRCVESMIGAVDANRTED-VDLSIGPPQSQDSHGAGSSELPLSPEDIHSFEENGFVMLKRAFDPDVAAACRQGRKMTKTMESLWKRLKGDGIRREEPATWIRKKGISEIYGIA 193
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A662YJD1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA) HSP 1 Score: 248 bits (632), Expect = 9.140e-72 Identity = 124/276 (44.93%), Postives = 170/276 (61.59%), Query Frame = 3
Query: 456 AGSSKLPLSP----EDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQA 1271
A S LPL P I SF+ +GFV+L RAF A CR +W+RL DGI + +P+TWV + GIPEIY +P W G L+P+LK A++QL G D WE+FGCGWWM+TFP A+PPW A GKWH+DGA ++H+ S+E G+L +FLFSD+ GGTA+ GSHK +A++L + G+ G +S AR+ + +VE NG AGDV+L HP LLH+RS NL VR MC+P + L ++L+ S +E+ ++ A
Sbjct: 39 ASSLPLPLPPPLDANAIASFQRDGFVLLSRAFPESTAQQCRALIWERLVQDGIEKSDPSTWVERHGIPEIYTAEDAPV------WDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL-EKNEPRGMKGGAVSFQARKF----RREQVVEVNGKAGDVMLVHPFLLHARSKNLGQKGADSVRMMCNPNVRLHQKMNLNRPDGAYSPVEQAIVDA 303
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: K3W8D1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D1_GLOUD) HSP 1 Score: 244 bits (622), Expect = 1.620e-70 Identity = 125/266 (46.99%), Postives = 166/266 (62.41%), Query Frame = 3
Query: 474 PLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQA 1271
PL+ +I +F +GFV+LK AF AA CRE +W+RL+ DGIR+ + +TWV + GIPEIY P W L+P+L AV+QL G SWEEFGCGWWM+TFP A PPW A GKWH+DGA ++H+ S+E G+L IF FSDV GGTA+ GSH +A++L + GL G +S AR+ P +VE NG AGDV+L HP LLH+RS NL + VR MC+P I L ++L A + + +ER ++ A
Sbjct: 43 PLAAREIDAFVRDGFVLLKDAFSEATAAKCRELVWRRLEKDGIRKSDSSTWVERHGIPEIYNGDDDPL------WNDVLTPRLHRAVDQLCGQGSWEEFGCGWWMITFPNQADPPWEAAGKWHVDGASYQHHLDSKESGLLAIFCFSDVGPTEGGTALSVGSHVPIAQLL-EKNQPRGLKGGAVSYNARK--FPRRR--VVEVNGKAGDVMLVHPFLLHARSKNLGTRGVDSVRIMCNPNIRLHKKMNLDRADDAYTPVERAIVNA 297
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A0P1B5H3_PLAHL (Phytanoyl-CoA dioxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5H3_PLAHL) HSP 1 Score: 240 bits (612), Expect = 2.200e-69 Identity = 117/269 (43.49%), Postives = 170/269 (63.20%), Query Frame = 3
Query: 474 PLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQACPV 1280
PL E+I SF +GFV+L++AF P A CRE +W+RL DGI ++ P+TWV + GIPE+Y + ++P W L+ +LKSA++Q+ G WE+FG GWWM+TFP ++PPW A GKWH+DGA ++H+ S+E G++ IFLF+D+ GGTA+ GSHK VA++L G+ G +S AR+ ++VE NG AGDV+L HP LLH+RS NL VR MC+P + L ++L+ E S +E+ ++ A +
Sbjct: 22 PLDQEEIKSFIHDGFVLLRKAFTPVTARKCRELIWERLAQDGIGKD-PSTWVERHGIPELYTVENNPV------WDDVLTRRLKSAIDQICGQGRWEDFGLGWWMITFPEQSKPPWDAAGKWHVDGASYQHHIDSKESGLVAIFLFTDINPGEGGTALSVGSHKNVARLLAVNE-PRGMKGGAVSHEARKF----EHQNVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVDSVRIMCNPNVKLHHRMNLNRVDENYSPVEKAIIDALDI 278
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A0W8C4L5_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L5_PHYNI) HSP 1 Score: 239 bits (609), Expect = 9.220e-69 Identity = 121/282 (42.91%), Postives = 170/282 (60.28%), Query Frame = 3
Query: 450 HGAGSSKLPLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQACPVGGRNL 1295
H S PL E I SF +GFV+L+ AF A CR+ +W RL+ DGI ++ P+TWV + GIPE+Y +P W ++P+LK A++Q+ G D WE FG GWWM+TFP A+PPWGA GKWH+DGA ++H+ ++E G+L IFLFSD+ GGTA+ GSHK VA++L + G+ G +S AR+ ++VE NG AGDV+L HP LLH+RS NL VR MC+P + L ++L+ S +E+ ++ A G +L
Sbjct: 20 HRVSSEAAPLDQEAIDSFTRDGFVLLRDAFSSSTAEKCRDLIWTRLEQDGITKD-PSTWVERHGIPELYTAEDNPV------WSDVVTPRLKRAMHQICGKDRWENFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL-QKNEPRGMKGGAVSYQARQF----RRREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVESVRIMCNPNVRLHRRMNLNRVNGDYSPVEQAIVDALEESGADL 289
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A1W0A887_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A887_9STRA) HSP 1 Score: 236 bits (601), Expect = 9.720e-68 Identity = 118/276 (42.75%), Postives = 176/276 (63.77%), Query Frame = 3
Query: 462 SSKLPLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSW--EEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETR-SVLERVMMQACPV 1280
+ ++ L PE++ F ++G+V+LK+AF + AAACRE LW+RL+ DG+ R + TW PE + IS S K G PW ++P+LK A++QL GV+ W EE CGWW++TFPG A PW G WH+DG+ + H+ S+E G+LPIFLF+D+ GGTA+ GSH VA+IL ++A G+ G ++S+ A+ +L IVET G AGDV+LTHP L+H+RS N VRFMC+P + L++ ++L+ + S +E+ ++ A +
Sbjct: 4 NDEIGLLPEEVDFFIEHGYVLLKKAFSTETAAACREFLWERLEKDGLNRHDSLTW------PEKHWISESYDKNTGDPWTNVITPRLKRAMDQLCGVERWKTEELTCGWWVITFPGHAMHPWAPAGHWHVDGSRYIHHIDSKESGLLPIFLFNDINPGDGGTAISPGSHHHVAQIL-HKAAHNGMKGGKVSATAKAWVLKNKKS-IVETQGKAGDVMLTHPFLMHARSKNCGH----EVRFMCNPNVGLKNPMNLNREDASEYSPVEKAIVNAIAI 267
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A329S5P2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5P2_9STRA) HSP 1 Score: 235 bits (599), Expect = 2.200e-67 Identity = 116/266 (43.61%), Postives = 165/266 (62.03%), Query Frame = 3
Query: 474 PLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQA 1271
PL + I SF +GFV+L+ AF A CR+ +W RL DGI ++ +TWV + GIPE+Y + P W ++P+LK A++Q+ G D WE+FG GWWM+TFP A+PPWGA GKWH+DGA ++H+ S+E G+L IFLFSD+ GGTA+ GSHK +A +L + G+ G +S AR+ ++ E NG AGDV+L HP LLH+RS NL VR MC+P + LR ++L+ A + S +E+ ++ A
Sbjct: 24 PLDKQAIDSFIHDGFVLLRGAFSSSTAQKCRDLIWTRLAQDGITKDS-STWVERHGIPELYTVEDDPV------WGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIAGLL-EKNEPRGMKGGAVSYQARQF----QRREVAEVNGKAGDVMLVHPFLLHARSKNLGQKGAESVRIMCNPNVRLRQKMNLNLADDAYSPVEQAIVDA 277
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: F0XZZ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZZ7_AURAN) HSP 1 Score: 254 bits (649), Expect = 2.730e-67 Identity = 126/252 (50.00%), Postives = 166/252 (65.87%), Query Frame = 3
Query: 474 PLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGDGIRREEPATWVR----KIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSW---EEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREAL--LPAADDDIVETNGDAGDVLLTHPLLLHSRSTNLASIEESGVRFMCHPAIPL 1202
PLS +D+ F +G+ +L AF DVA CR++LW+R+ GI ++PATW ++G+ +++ S G PW S +L++A++QL G W + GCGWW+VTFPG A PWGAEG WH+DG + H SREIG+LPIFLFSDV GGGTA+ GSH+ VA++LW RAG G+ GP LS+ AREAL A D +VET G AGDV+LTHP LLH+RS NL ++ + VRFMCHPA+ L
Sbjct: 564 PLSADDLAQFVRDGYCLLPGAFPRDVAFDCRDALWRRVGDLGIAADDPATWSLAPKGRLGLQDVFRESDL-----GAPWAECWSDRLRAALDQLCGAGRWVDDDALGCGWWVVTFPGVANAPWGAEGSWHVDGHGYAHRVDSREIGVLPIFLFSDVAARGGGTALAPGSHRAVAELLW-RAGAEGVPGPRLSALAREALGAEALAGDAVVETRGRAGDVMLTHPFLLHARSKNLRDVDAAAVRFMCHPAVRL 809
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Match: A0A4D9CZQ5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZQ5_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.640e-67 Identity = 137/330 (41.52%), Postives = 176/330 (53.33%), Query Frame = 3
Query: 462 SSKL--PLSPEDIHSFEDNGFVMLKRAFDPDVAAACRESLWKRLKGD-----------GIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGV-DSWEEFGCGWWMVTFPG----------------------------------------FAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNRAGTTGLTGPELSSAAREALLPAADDD--IVETNGDAGDVLLTHPLLLHSRSTNLASIE----ESGVRFMCHPAIPLRDHLDLHSAPETRSVLERVMMQA 1271
SS+L PLS D+ F NGFV+LK+AFDPDVAAACR +W+ ++G+ GI R +P+TW K + IYG P PW +P+L A++QL G + W FGCGWWMVTFPG F PPW EG WHIDG R H E+G++PIFLFSDVR+ GGGTA+ +GSHK VA++L AG G+ EL +A + + +VET G+AGDV+ THP LLH RS N A++ E GVRFMCHP + LR+ + RSV+ER +M A
Sbjct: 13 SSRLEDPLSATDLEFFVQNGFVLLKKAFDPDVAAACRSEIWQVIEGESRAAREEGNDQGITRSDPSTWPLKFPLARIYGAEEGP------PWGQVFTPRLLQALDQLCGGREGWRPFGCGWWMVTFPGQGRQARPRSPXXXXXXXXXXXXXXXXXXXXXXXXSTPPPRFPPPPWRLEGHWHIDGRRRRRCLHPLEVGLVPIFLFSDVREGGGGTALCQGSHKWVARLL-REAGPAGMDAAELIRRG-QAWVEGEEGGCRVVETVGEAGDVMFTHPFLLHGRSRNNAAVPVGGGEEGVRFMCHPGVALREAASVDGTEGGRSVVERAIMAA 334 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig164.4614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig164.4614.1 >prot_Ecto-sp13_S_contig164.4614.1 ID=prot_Ecto-sp13_S_contig164.4614.1|Name=mRNA_Ecto-sp13_S_contig164.4614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp MDNDHVQPSKKRSFDAISQENPTTPDTPEADSEGGGWQCSPSPHAAGTISback to top mRNA from alignment at Ecto-sp13_S_contig164:10900..20201+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig164.4614.1 ID=mRNA_Ecto-sp13_S_contig164.4614.1|Name=mRNA_Ecto-sp13_S_contig164.4614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9302bp|location=Sequence derived from alignment at Ecto-sp13_S_contig164:10900..20201+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig164:10900..20201+ >mRNA_Ecto-sp13_S_contig164.4614.1 ID=mRNA_Ecto-sp13_S_contig164.4614.1|Name=mRNA_Ecto-sp13_S_contig164.4614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1581bp|location=Sequence derived from alignment at Ecto-sp13_S_contig164:10900..20201+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |