mRNA_Ecto-sp13_S_contig16374.4602.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: D8LL49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI) HSP 1 Score: 416 bits (1070), Expect = 6.830e-145 Identity = 209/215 (97.21%), Postives = 213/215 (99.07%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
DQALIQRVT+EVEAESGVELDQLINPAKVINLERDLVKLRAALED PG+DR AIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDIS+QVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPF+TKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG
Sbjct: 106 DQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLRAALEDEPGTDREAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 320
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A6H5JI21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 3.640e-138 Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK 624
DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPG+DR AIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDIS+QVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK
Sbjct: 110 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGNDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK 313
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.130e-80 Identity = 127/216 (58.80%), Postives = 159/216 (73.61%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKP-GASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
DQALI RV EVE ESGV LDQLINP+KVINLERDLVKLRA LE G + + + I KE+ L EKR MQ WLK++FVGQA ++ I+ G M D+VP F HVD+S++VLGFW +WLF +PSLRARKP +EK AL+IAF+A+P+VS A+P +TK+PV IYWAN+A A Y YGF G + + QP+W++FIFK+LDFGSG+ERG
Sbjct: 66 DQALIARVAAEVERESGVALDQLINPSKVINLERDLVKLRATLETATGDSASELRKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITKDPVSIYWANLAVCAASYVYGFASGGQSEED---EAKQPQWVRFIFKALDFGSGRERG 278
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A6S9FX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK) HSP 1 Score: 229 bits (584), Expect = 5.320e-72 Identity = 117/216 (54.17%), Postives = 154/216 (71.30%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRTA-IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
D +I+R+ +EV SGVEL+QL++PAKV+NLER++ +L+ LE R A IEEEIA K++ EKRMY+QGWLK +FVGQ+V++ ++ G ++ VPF VDISV+VLGFWF+WLFT+PSLRARKP A EK AL+ AF TP+ + PFVTK+PV IYWAN+ ACYGYG + KP D A + P W+K K+LD+GSG+ERG
Sbjct: 67 DALIIKRLEDEVMEISGVELEQLLSPAKVVNLEREIFQLKKELETTSNQARAAEIEEEIATKQTKANGEKRMYVQGWLKTLFVGQSVLSVVVAGFLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAPFVTKDPVLIYWANLVVTAACYGYGLLLWKPSDAPAEADTT-PGWVKDALKALDYGSGRERG 281
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A7S2UZ01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.130e-71 Identity = 122/220 (55.45%), Postives = 152/220 (69.09%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRTA-IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGAS----KSQPKWLKFIFKSLDFGSGQERG 657
D AL+ R+ +EVE +GVELDQL+NP KV+NLERDL+KL LE S R I +E+ +K L EKRM +QGWLK +FVGQAVI+T GLM D VPF H+D+SV+VLGFW +WLFTVPSLRARKP A EK AL+IAF ATP+ + A+PF TK+PV IYWAN+A L Y YGFT+G + P +LK ++LD+GSG+ERG
Sbjct: 75 DAALVARLAKEVEEANGVELDQLLNPGKVVNLERDLLKLSKELEICQDSTRIEEINKEMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALPFFTKDPVTIYWANMAVLGLSYAYGFTLGSXXXXXXXXXXXXXSNLPDFLKAAIRALDYGSGRERG 294
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: W7TZ94_9STRA (Resistance to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.570e-63 Identity = 106/224 (47.32%), Postives = 149/224 (66.52%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLR---AALEDGPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTV---GKPDDGEGGASKSQ---PKWLKFIFKSLDFGSGQERG 657
D ++QR+ E+V E+GV+LDQL+NP+KV+NLE +L+ LR AA G G +E +I KKE+ L EKR+ M+GWLK +F+GQ+++ +L G++A D +P F H+ + ++ FW W+FT+PSLRAR+PGA EK ALD+AFL TPVVS MPF+T++ I+WAN YGY F G+ +GE G S+ P LK K+LD+GSG+ERG
Sbjct: 70 DDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERG 293
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A7S2FLN3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLN3_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.810e-59 Identity = 102/206 (49.51%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 64 VELDQLINPAKVINLERDLVKLRAALE--DGPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISVQVLGFWFVWLFTVPSLRARKPGA------SEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
V L QL+NP+KV+NLE+D+ LRA+L D + R I ++IAKKE E R M+ WLK VFVGQ+V++ + GL++ D +PF P++D++V+VLGFW +WLFT+PSLR+RKPG +EK ALDIAFL TP+ + PF TK P I+W N+ L ACY Y FTV + A S PK +KF+ +LDFG+G+ERG
Sbjct: 87 VGLTQLLNPSKVVNLEKDIDALRASLAAPDLDSAVREEIIDQIAKKEFKKSNEMRGVMRDWLKAVFVGQSVLSVAICGLVSYDALPFLPNLDLAVRVLGFWGIWLFTIPSLRSRKPGGVWGMSNAEKNALDIAFLVTPLANLLAPFATKNPPDIFWLNMVVLSACYAYSFTVSPQESSGASADASLPKPIKFVLTALDFGAGRERG 292
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A6S8YSX9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YSX9_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.290e-58 Identity = 110/246 (44.72%), Postives = 147/246 (59.76%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALED---------------------GPGSDRTAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP---------HVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGF-TVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
D ++R+ E+++ ESGV+LDQL+NPAKV+NLERDLV LR+ L D G G D + ++I+KKE L+ E+R +GWLK +F+GQA+++ L +M +D F +DIS+QVLGFW LF VPSLR+R+P EK ALDIAFLATP+VS P TK+ I+ AN A Y + + T K DG+ P+WLKFI+KSLDFGSG+ERG
Sbjct: 82 DDPFVRRINEQIQEESGVDLDQLLNPAKVVNLERDLVNLRSQLADLTGITGIDNFIGITTEEIDNGGGGEDADKLRKKISKKEKDLLIERRSVFRGWLKNIFLGQAILSLGLSWIMVTDPSILFGGFDWFNNTNSIDISIQVLGFWXXXLFIVPSLRSRRPKGFEKKALDIAFLATPLVSLLAPVATKDTAEIWIANFAVTAGAYAFAYLTFDK--DGDNNDGSKDPEWLKFIYKSLDFGSGRERG 325
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A7S1GGE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGE3_CYCTE) HSP 1 Score: 190 bits (482), Expect = 5.080e-57 Identity = 107/244 (43.85%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALE------------------DGPGSDRTA--IEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP--------HVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGF-TVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
D ++ + ++AE GV LD+L+NPAKV+NLERDL LR L DG G A I ++IAKKE + E+R +GWLK VF+ QAV++ +L +MAS+ F ++D+S++VLGFW LF VPSLR+R+P +EK ALDIAFL TP++S P +TK+ I+ AN+ + A Y + F T G+ DD + G++ QP+WLKFI+KSLDFG+G+ERG
Sbjct: 7 DDPFVKSIDASIQAEVGVSLDELLNPAKVVNLERDLFNLRTELATLTGKVDLDIAGLPTDECDGGGGGEAADEIRQKIAKKEKDVALERRSVFRGWLKNVFLAQAVLSFVLSWIMASNPAQLFGGFDWFYSYNMDVSIKVLGFWXXXLFVVPSLRSRRPKGAEKKALDIAFLGTPLISIVAPALTKDTELIWGANLLVVAASYAFAFLTDGEDDDDDSGSN--QPEWLKFIYKSLDFGTGRERG 248
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Match: A0A448Z3P0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3P0_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.840e-55 Identity = 105/225 (46.67%), Postives = 143/225 (63.56%), Query Frame = 1
Query: 13 DQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGSDRT--AIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFP--------HVDISVQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERG 657
D +Q + + + GV LD L+NPAKV+NLER+L +LR LE G + T +I + I KKE L E+R +GWLK +FVGQAVI+ + +MA++ F +DIS+QVLG+WF WLF VPSLR+R+P EK ALDIAFL TP+VS A P +TK+ I++AN + YG+ + DD + S ++P WLKF++KSLDFGSG+ERG
Sbjct: 116 DDPFVQNIDAGIREDFGVGLDDLLNPAKVVNLERELYQLREELE-GTTDESTIQSITKSIEKKEGKLAIERRSVFRGWLKNIFVGQAVISFGISYVMATNPSSLFGGFDWYYYNSMDISIQVLGYWFWWLFIVPSLRSRRPRGFEKEALDIAFLGTPLVSLAAPVLTKDTGLIWFANFVIVAGAYGFAYLTDGDDDSDDSDS-NKPAWLKFVYKSLDFGSGRERG 338 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16374.4602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16374.4602.1 >prot_Ecto-sp13_S_contig16374.4602.1 ID=prot_Ecto-sp13_S_contig16374.4602.1|Name=mRNA_Ecto-sp13_S_contig16374.4602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp MSHGDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGback to top mRNA from alignment at Ecto-sp13_S_contig16374:3..3327- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16374.4602.1 ID=mRNA_Ecto-sp13_S_contig16374.4602.1|Name=mRNA_Ecto-sp13_S_contig16374.4602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3325bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16374:3..3327- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16374:3..3327- >mRNA_Ecto-sp13_S_contig16374.4602.1 ID=mRNA_Ecto-sp13_S_contig16374.4602.1|Name=mRNA_Ecto-sp13_S_contig16374.4602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16374:3..3327- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |