prot_Ecto-sp13_S_contig1637.4599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1637.4599.1
Unique Nameprot_Ecto-sp13_S_contig1637.4599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length354
Homology
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.020e-96
Identity = 237/388 (61.08%), Postives = 250/388 (64.43%), Query Frame = 0
Query:    1 MKPRWELGVLLTLPCFSSAQSAV-SSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECG-VVGFTCIDPTSSCYXXXXXXXXGEQQATYSPSPVNTVTYSPTAYPVYDXXXXXXXXXXXXXDSPTYYNGFLDDXXXDGFFDSP-------DASDD----------------------DNDRATSDD----APVGAIVGGAVGGTAFLAAAAVLACMFVTGRLKCSKCSNSSDPPGAPTPAGDGTTTVATKAYPAPVAAGGGALTGPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSTPAXXXXXXXXXXXXXXXXXXXAAPAAPAXXXXXXXAYGSYDHDVTTTEALPPPYGHPVNQYPQPK 353
            +KPRWELG LLT+ CFSSAQ    SSDCS S+ISDG CDSSNNNSNCDYDGGDCCSCDCFDDTYECG V  FTCIDP+SSC     X   GE+ A ++PSP  TVT SPTAYP Y              DSPTYY+GFLDD   D F  SP       D   D                      DND+ATSDD    APVGAIVGGAVGGTAFLAAAAVL  +F TGRLKCSKCS+SSDPP APTPAGDG+T  ATKAYPAPVAAGGG   GP +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       AYGSYDHD TTT A PPPYGHPVNQYPQPK
Sbjct:  102 IKPRWELGALLTVACFSSAQQGTTSSDCSDSWISDGMCDSSNNNSNCDYDGGDCCSCDCFDDTYECGSVTAFTCIDPSSSCTYHHYXDDDGEEWAAFTPSPFYTVTLSPTAYPQYHFDDDSY-------DSPTYYDGFLDDDDTD-FTPSPAVYVHSSDTDHDXXXXXXXXXXXXXXXXXXEDEADNDKATSDDGDDEAPVGAIVGGAVGGTAFLAAAAVLGYLFFTGRLKCSKCSSSSDPPAAPTPAGDGSTRAATKAYPAPVAAGGGVPGGPHTDLPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------AYGSYDHDATTTAAPPPPYGHPVNQYPQPK 446          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.130e-39
Identity = 118/236 (50.00%), Postives = 136/236 (57.63%), Query Frame = 0
Query:    1 MKPRWELGVLLTLPCFSSAQSAVS---SDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSSCYXXXXXXXXGE--QQATYSPSPVNTVTYSPTAYPVYDXXXXXXXXXXXXXDSPTYYNGFLDDXXXDGFFDSPDASDDDNDRATSDDAPVGAIVGGAVGGTAFLAAAAVLACMFVTGRLKCSKCSNSSDPPGAPTP-AGDGTTTVATKAYPAPVA 230
            MK +WELG L+T  CFS+A    +   SDC   +ISDG CDSSNNNS C+YDGGDCCSCDCFDDTYECG  GFTC+DP+SSC         G+     TY     +   +   +     XXXXXXXXXXXXX   T  +G LD        +      DD D    D APV          TAFLAAAAVL C+FVT RLKCSKC +S  PP AP P AG G+    TK +P P A
Sbjct:    1 MKTQWELGALVTAACFSTASGYTTTTFSDCYQEWISDGMCDSSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTYD---YDVDDFGDDSXXXXXXXXXXXXXXXXXXXXST--SGALD-------LEGGGIPSDDGD----DGAPVXXXXXXXXXXTAFLAAAAVLVCLFVTCRLKCSKCCSSPGPPAAPAPPAGHGSVQATTKTFPGPAA 220          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.820e-33
Identity = 63/83 (75.90%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    1 MKPRWELGVLLTLPCFSSAQSAV---SSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSSCY 80
            MKPRWELG LLT+ C S A       SS C TS+ISDG+CDSSNN S CDYDGGDCCSCDC DDTY+CGVVGFTCIDPTSSCY
Sbjct:    1 MKPRWELGALLTVACISVATGFTTYDSSGCFTSYISDGFCDSSNNISGCDYDGGDCCSCDCLDDTYQCGVVGFTCIDPTSSCY 83          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.480e-15
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    7 LGVLLTLPCFSS---AQSAVSSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSSC 79
            LG+L+ +   S+   A S  S+DCS  F  DG CD+ NNN+ C+YDGGDCCSC C +DTY+CGV GF C+DP++ C
Sbjct:    9 LGLLIAVAIVSTRVEADSTTSNDCSPDFYRDGECDTHNNNAECEYDGGDCCSCTCQNDTYDCGVSGFDCVDPSAEC 84          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.550e-14
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   24 SSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSSC 79
            S+ C +S+  DGWCDS  N+++C++DGGDCC CDC D TY+CGVVG+ C+DPTSSC
Sbjct:  407 STACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSC 462          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.240e-13
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   17 SSAQSAVSSDCSTS--FISDGWCDSSNNNSNCDYDGGDCCSCDCFD--DTYECGVVGFTCIDPTSSCY 80
            SS   +VSS C      +SDG CDS NNN+ CDYDGGDCC CDC+D  + YECGVVG+ C+D TS CY
Sbjct:  352 SSDADSVSSGCFDGDWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVVGYYCLDQTSLCY 419          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.040e-12
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   15 CFSSA------QSAVSSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSS 78
            C SSA       S+ +SDC   +++DGWCD  NNN+ C++DGGDCC C C D  YECG+ GF+C+DP+++
Sbjct: 1954 CSSSAAAQSKNHSSTTSDCIGVYVTDGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSAT 2023          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.040e-11
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   32 ISDGWCDSSNNNSNCDYDGGDCCSCDCFD--DTYECGVVGFTCIDPTSSCY 80
            +SDG CDS NNN+ CDYDGGDCC CDC+D  + YECG  G+ C+D TS CY
Sbjct:  364 VSDGKCDSGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSICY 414          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: D7FSN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN8_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 5.960e-11
Identity = 59/176 (33.52%), Postives = 70/176 (39.77%), Query Frame = 0
Query:   28 STSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCIDPTSSCYXXXXXXXXGEQQATYSPSPVNTVTYSPTAYPVYDXXXXXXXXXXXXXDSPTYYNGFLDDXXXDGFFDSPDASDDDNDRATSDDAPVGAIVGGAVGGTAFLAAAAVLACMFVTGRLKCSKCSNS 203
            S+S+ISDGWCDS  N   CD+DGGDCC CDC D  Y CGV  + C++P S+C                                                       G  DDXX                     D PVGAIVGG +GG  FLAA  +LA +F  G LK   C +S
Sbjct:   62 SSSYISDGWCDSYYNTEECDWDGGDCCECDCVDALYTCGVADYDCLNP-SAC------------------------------------------------------GGDEDDXX---------------------DVPVGAIVGGVIGGVLFLAAVIILAVLFKKGCLKPCACGDS 161          
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Match: A0A2E5U3S0_9BACT (Dockerin domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E5U3S0_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 1.430e-8
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   21 SAVSSDCSTSFISDGWCDSSNNNSNCDYDGGDCCSCDCFDDTYECGVVGFTCID 74
            S V+   +T+F+ DGWCDSSNNN++CDYDGGDCC  DC D  Y C   G  C D
Sbjct: 1917 SIVNCSGNTNFVGDGWCDSSNNNADCDYDGGDCCPSDCTDGVYSCASYGGDCND 1970          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1637.4599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KN00_9PHAE1.020e-9661.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSP3_ECTSI1.130e-3950.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K5D1_9PHAE3.820e-3375.90LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTT4_9PHAE1.480e-1553.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE2.550e-1462.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI6.240e-1360.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHG7_ECTSI1.040e-1250.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5J6K0_9PHAE2.040e-1164.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSN8_ECTSI5.960e-1133.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2E5U3S0_9BACT1.430e-857.41Dockerin domain-containing protein n=1 Tax=Candida... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 12..54
e-value: 0.0082
score: 17.5
IPR000800Notch domainPFAMPF00066Notchcoord: 25..53
e-value: 2.1E-4
score: 21.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..353
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.68
NoneNo IPR availableTMHMMTMhelixcoord: 169..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1637contigEcto-sp13_S_contig1637:1553..8271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1637.4599.1mRNA_Ecto-sp13_S_contig1637.4599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1637 1553..13568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1637.4599.1 ID=prot_Ecto-sp13_S_contig1637.4599.1|Name=mRNA_Ecto-sp13_S_contig1637.4599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
MKPRWELGVLLTLPCFSSAQSAVSSDCSTSFISDGWCDSSNNNSNCDYDG
GDCCSCDCFDDTYECGVVGFTCIDPTSSCYYHHYYDDDGEQQATYSPSPV
NTVTYSPTAYPVYDYDHDDDHDDHDHDDSPTYYNGFLDDDHDDGFFDSPD
ASDDDNDRATSDDAPVGAIVGGAVGGTAFLAAAAVLACMFVTGRLKCSKC
SNSSDPPGAPTPAGDGTTTVATKAYPAPVAAGGGALTGPRSDLPPSPSVA
GDGSAGTATKTYPAPVASAAGASDGPRADLPPPPAFSTPAGDRSAQSATE
TFPDPTASAAAPAAPARDLPPPPAYGSYDHDVTTTEALPPPYGHPVNQYP
QPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom