mRNA_Ecto-sp13_S_contig16351.4594.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16351.4594.1
Unique NamemRNA_Ecto-sp13_S_contig16351.4594.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: D7FHT0_ECTSI (Polyketide Synthase III (C-terminal region) Polyketide Synthase III (N-terminal region) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHT0_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 1.710e-111
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSR 501
            AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKI+ANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIIT VQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSR
Sbjct:  215 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIIANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITEVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSR 381
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.010e-92
Identity = 135/205 (65.85%), Postives = 166/205 (80.98%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQI 615
            A+PG+ ALM+CVELSS+H  F DN  +A+  A+FADGCAA VLKGARK+ECPKG+L + D+H+WL+E +EDGIT+ I+PN I C LSK +P+ +A ++  F DGFL ++ + R DVDFW VHPGG  II   QNGLGL+EE TADSWAVLGEYGNMLSP+ MFVLSRVF+RH A +A+GK GYQTGMA +FSPGVGAEGIL +QI
Sbjct:  210 ANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGARKSECPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHKLGRDDVDFWCVHPGGRRIIEEAQNGLGLSEEQTADSWAVLGEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLRQI 414
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.450e-79
Identity = 118/205 (57.56%), Postives = 156/205 (76.10%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQI 615
            A+ G+ AL+VCVE+SS+H  F D+  +++  A+FADGCAA VL G  K   PKG+L + D H+WL+E +EDGIT+ I  N I C LSK +P+ +A ++  +VDGFLG++ +KR ++DFW VHPGG  II   QNGLGLTEE T+DSWAVL ++GNMLSP+ MFVL RVF+RH A +A+GK GY+ G+A +FSPGVGAEGIL KQ+
Sbjct:  249 ANAGKYALLVCVEISSVHTTFDDDINDSILHAIFADGCAAAVLSGETKDSIPKGTLAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDGFLGKHGIKRSEIDFWSVHPGGRRIIEEAQNGLGLTEEQTSDSWAVLDQFGNMLSPSVMFVLERVFKRHNAALAQGKKGYRQGLAFSFSPGVGAEGILLKQL 453
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK)

HSP 1 Score: 238 bits (608), Expect = 3.240e-74
Identity = 113/204 (55.39%), Postives = 149/204 (73.04%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQ 612
            A+PG+ AL+ CVELSS H  F ++T +++  A+F DG AA V+ G  K     G+L + D H+WL+E +EDGIT+ I  N I C LSK +P+ +A ++  +VD FL ++ +KR ++DFW VHPGG  II   QNGL L+EE  ADSWAVLGEYGNMLSP+ MFVLSRVF+RH+A+I  G+ GY+ G+A +FSPGVGAEGIL KQ
Sbjct:  207 ANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAAPGALAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDSFLNKHGIKRSEIDFWSVHPGGRRIIEEAQNGLSLSEEQCADSWAVLGEYGNMLSPSVMFVLSRVFKRHQAMIRRGETGYKQGLAFSFSPGVGAEGILLKQ 410
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 4.050e-72
Identity = 112/192 (58.33%), Postives = 142/192 (73.96%), Query Frame = 1 
Query:    4 HPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSP 579
            HPG+ ALM+CVELSS+H  F+DN  +A+  A+FADGCAA VL G   +   KG+L + D H+ L+E +EDGIT+DI PN I C LSK +P  +A  +G +VD +L ++++ R DVDFW VHPGG  II   QNGLGLTE+ TADSWAVL EYGNMLSP+ M+VLSRVF RH+A +A GK GY  G+A +FSP
Sbjct:  219 HPGKFALMLCVELSSVHTTFEDNINDAILHAIFADGCAACVLSGETASSAAKGTLAIVDDHAELMEGTEDGITLDINPNGISCTLSKHLPSYIAKHMGGYVDSWLRKHALSRGDVDFWAVHPGGRRIIEEAQNGLGLTEDQTADSWAVLNEYGNMLSPSVMYVLSRVFARHQAALAAGKPGYAMGLAFSFSP 410
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A7S2C201_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C201_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.320e-69
Identity = 106/201 (52.74%), Postives = 136/201 (67.66%), Query Frame = 1 
Query:   13 ECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQI 615
            + AL+ CVE+SS+H  F DN  +A+  A+FADGCAA VL G      P GS  + D H+WL+E +EDGIT+ I    I C LSK +P+ +A ++  +VD FL ++ MK++DVDFW VHPGG  II   QNGLGLTEE    SW VL +YGNMLSP+ MFVL  V + H   +A GK G+  G+A +FSPGVGAEGIL K +
Sbjct:    5 KAALVCCVEISSVHTTFDDNINDAILHAIFADGCAAAVLGGRTAKTAPTGSFAIVDDHAWLMEGTEDGITLSINETGISCKLSKYLPQYIAKNMAGYVDSFLAKHDMKKEDVDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLDQYGNMLSPSVMFVLELVMKEHNENLAAGKEGFSQGLAFSFSPGVGAEGILLKVL 205
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN)

HSP 1 Score: 221 bits (564), Expect = 5.170e-69
Identity = 104/204 (50.98%), Postives = 141/204 (69.12%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECP-KGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFK 609
            +HPG+ ALMVCVE+SS+H  F DN  +A+  A+FADGCAA V+ G +      KG   + D+H WL+E +EDGIT+ I  N I C+LSK +P+ +A ++  +VD FLG + +++ D+DFW +HPGG  II   QNGLGL+EE    SW VL +YGNMLSP+ MFVL  +   HK  +A+G+ G + G+A +FSPGVGAEGIL  
Sbjct:   92 SHPGKMALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAAAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMAGYVDSFLGMHGLQKTDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGILIN 295
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.980e-68
Identity = 104/204 (50.98%), Postives = 143/204 (70.10%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECP-KGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFK 609
            +HPG+ ALMVCVE+SS+H  F DN  +A+  A+FADGCAA V+ G +      KG   + D+H WL+E +EDGIT+ I  N I C+LSK +P+ +A ++G +V+ FLG +++++ D+DFW +HPGG  II   QNGLGL+EE    SW VL  YGNMLSP+ MFVL  +   HK  +A+G+ G + G+A +FSPGVGAEG+L K
Sbjct:  213 SHPGKLALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAKAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLGMHNLQKSDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWNVLSNYGNMLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGVLIK 416
[Close]
BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.100e-64
Identity = 103/201 (51.24%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:   13 ECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQI 615
            + AL+ CVELSS+H  F DN  +A+  A+F DGCAA VL G      PKG   + D H+WL+E +EDGIT+ I    I C LSK +P+ +A ++  +VD FLG++ M  +D+DFW VHPGG  II   QNGLGLTEE    SW VL +YGNMLSP+ MFVL  +   HK  +  G+ G++ G+A +FSPGVGAEGIL K +
Sbjct:  245 KAALVCCVELSSVHTTFDDNINDAILHAIFGDGCAAAVLGGRTAKTAPKGGFAIVDDHAWLMEGTEDGITLSINDTGISCKLSKYLPQYIAKNMKGYVDSFLGKHDMTMEDIDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLRDYGNMLSPSVMFVLELILNEHKRQLTAGEEGFKQGLAFSFSPGVGAEGILLKVL 445
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BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.380e-64
Identity = 102/204 (50.00%), Postives = 143/204 (70.10%), Query Frame = 1 
Query:    1 AHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARK-AECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFK 609
            A+PG+ ALM CVE+SS+H  F DN  +A+  A+FADGCAA V+ G +  A   KG   + D+H+ L+E +EDGIT+ I  N I C+LSK +P+ +A ++G +V+ FL ++++++ D+DFW +HPGG  II   QNGLGL+EE    SW VL +YGNMLSP+ MFVL  +   HK  +A+G  G + G+A +FSPGVGAEG+L K
Sbjct:  208 ANPGKLALMCCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGAPRAKGKFGIIDTHACLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLAKHALQKSDLDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKELAKGNRGLKQGIAFSFSPGVGAEGVLIK 411
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16351.4594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHT0_ECTSI1.710e-11198.80Polyketide Synthase III (C-terminal region) Polyke... [more]
D8LJ35_ECTSI1.010e-9265.85Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID... [more]
A0A7S2V1U6_9STRA1.450e-7957.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RDH2_HETAK3.240e-7455.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMD8_9STRA4.050e-7258.33Polyketide synthase III n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C201_9STRA2.320e-6952.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y6J5_AURAN5.170e-6950.98Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SDG4_9STRA3.980e-6850.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WPY4_9STRA1.100e-6451.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3NPW3_9STRA1.380e-6450.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16351contigEcto-sp13_S_contig16351:82..3726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score276.6
Seed ortholog evalue9.3e-72
Seed eggNOG ortholog2880.D8LJ35
Model size618
KEGG rclassRC00004,RC02726,RC02970
KEGG koko:K00660,ko:K13234,ko:K21384
KEGG ReactionR01613,R06568,R07987,R07988,R07989,R08808,R08810
KEGG Pathwayko00941,ko00945,ko01100,ko01110,ko04712,map00941,map00945,map01100,map01110,map04712
KEGG ModuleM00137
Hectar predicted targeting categoryother localisation
GOsGO:0000325,GO:0001101,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0006810,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009611,GO:0009628,GO:0009629,GO:0009705,GO:0009719,GO:0009725,GO:0009733,GO:0009753,GO:0009812,GO:0009813,GO:0009889,GO:0009914,GO:0009926,GO:0009962,GO:0010033,GO:0010224,GO:0010817,GO:0012505,GO:0016020,GO:0019222,GO:0031090,GO:0031537,GO:0031540,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0060918,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0098588,GO:0098805,GO:1901576,GO:1901700
Exons4
EggNOG free text desc.naringenin-chalcone synthase activity
EggNOG OGs2S4A6@2759,COG3424@1
EC2.3.1.177,2.3.1.208,2.3.1.217,2.3.1.74
Cds size594
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01008
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462860.8487477-CDS-Ecto-sp13_S_contig16351:81..1991681462860.8487477-CDS-Ecto-sp13_S_contig16351:81..199Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16351 82..199 -
1681462860.8706145-CDS-Ecto-sp13_S_contig16351:1227..13811681462860.8706145-CDS-Ecto-sp13_S_contig16351:1227..1381Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16351 1228..1381 -
1681462860.8824406-CDS-Ecto-sp13_S_contig16351:2368..25551681462860.8824406-CDS-Ecto-sp13_S_contig16351:2368..2555Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16351 2369..2555 -
1681462860.8980803-CDS-Ecto-sp13_S_contig16351:3567..37021681462860.8980803-CDS-Ecto-sp13_S_contig16351:3567..3702Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16351 3568..3702 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462860.9125676-UTR-Ecto-sp13_S_contig16351:3702..37261681462860.9125676-UTR-Ecto-sp13_S_contig16351:3702..3726Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig16351 3703..3726 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16351.4594.1prot_Ecto-sp13_S_contig16351.4594.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16351 82..3702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16351.4594.1

>prot_Ecto-sp13_S_contig16351.4594.1 ID=prot_Ecto-sp13_S_contig16351.4594.1|Name=mRNA_Ecto-sp13_S_contig16351.4594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp
MVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVV
ADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIVANSVGPFVDGFLGR
NSMKRKDVDFWVVHPGGSAIITAVQNGLGLTEEHTADSWAVLGEYGNMLS
PTSMFVLSRVFQRHKAIIAEGKAGYQTGMAIAFSPGVGAEGILFKQI*
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mRNA from alignment at Ecto-sp13_S_contig16351:82..3726-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16351.4594.1 ID=mRNA_Ecto-sp13_S_contig16351.4594.1|Name=mRNA_Ecto-sp13_S_contig16351.4594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16351:82..3726- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCACCCCGGCGAGTGCGCTCTTATGGTGTGCGTAGAGCTCAGTTCGCT
GCACGCGAATTTCCAGGATAACACCGCCAACGCCGTGAGCATGGCGCTTT
TCGCCGACGGGTGCGCGGCAACCGTCCTGAAGGGGGCTAGAAAAGCTGAG
TGCCCGAAGGTGAGAGACAGAGCGAATGATTGGAGCGCTCCGGGAGTATC
GTGAAAAGACTGCCACTGTGATGTAGGTGGCACCCACTACTTCTCCTGTT
CTTTTGATGGGGGTTTGCAATGGTTCGGTGTCGTTCCGTGTGCCACATAC
TCGTTCTCTTTGGGTGTCCCAAGGTTGATGACGCGTAAGAGTCCAGCCAT
TTTCTGTTGGAGGTGAAAGCAACCCCCCCCCCCCCCCCCCCCCCTTTTTC
CCCCCGCGCTGAGGAGCTGGTGTCGCCCCCAAGCCTCGGTTTTAGCGTTT
TTTGCTTGTAAGAACCCCNNNNNNNNNNCTCTTTCTTTTTGGGTGTCCCA
AGGTTGATGACGCGTAAGAGTCCACCCATTTTTTGTTGGGGGTGAAAGCC
CCCCCCCCCCCCCCCCGCCATGTTTCCCGCCTCGAACTAGGGATCCGTGG
TCCATGCCTGCCTTAGTGTCGCAAGTTTCCTGCTTGTACGCTCCCTGCGT
GCTGCTCTATCTACATGTCTCGAATGCAGTCGTAGGCCCTATTTAAGGCG
CGTTAGACAAGGCGGGTGCCCGCTACAAGGGCGGGTGAATTGGCTGGCAC
AGATGGAATGCTCAAGTCGTTTCATGCATTGAAAGGGCGGGTGCCCTGTG
TAGGGCCGGTTAATCGGTCTGGCGCATACGCGCCTCATAGAGGACTGCAG
TCGGCTTGATCAGCGTAATTGAGGTGCCTGGGGTTCGTCCCACATAATGT
ATTCTAGCGCCGGCCTTCACACCTTTCGCCGGCCTTCACACCTTTCGATG
TACGCTTTTGATGTATCAGCCAGGGTCGCACAGTACAAAGGTCACACAGG
AGCTTATTTTGTGTTGCAAAAAGCCATGAAGTATTGGTCAAGATTAAAAA
CAACCTACAGAACTGTATTTTGCGTAGACACGAAGTTACCGCATTTCACG
TTGTTTAATTATGTTTTATTTGTTCAGCTATGCAGGTCTTACTGTTTTTG
TTTTGGTTCGTCGTGTTGCAGGGAAGCCTCGTCGTCGCGGACAGCCATTC
GTGGCTCATCGAGGACAGCGAGGACGGCATCACTGTCGACATCGAGCCCA
ACTCTATCGTGTGCGTCCTTTCCAAGCTCGTTCCTAAGATCGTCGCGAAT
AGCGTGGGACCATTCGTGGACGGGTTCTTGGGCAGGAACAGCATGAAGCG
AAAGGACGGTGAGCTGTAAGCGAAAGGTTTACCGTAACAGTGTAGTCGCG
TGCACGCTCGATTAATCAAGTGCCGTAGCGCGGCCCGCCATGTGATCATG
GCAAGATAACCGCGCTCCACACTAGGGGCGATTTGGGAAGACCTCGGCGT
GTTTGGTCGTGGGCAGCATGTGCCCTTGGCGTGTGGTTGTCGATTTGAAA
CGAAGCGTTCGGGTCCATTGTGTTTAGGTTACCTTTGAAGGGTAAGTCAG
CCTGTGACTACGGGAATCGACCGTTCATGCGTTTGACTACGGTAGTACGG
ACAGATGAAGGTACCGGGTAGAGAGATCGGAACGGCTTGAATGTTAAGAC
AACAACAACAACAACAACCAGAGAATTGGTTGAGGGCTTTCCCTCAAGGA
ATCGTGTACAAATTCTGATCGTTCAGCGCTTGTAGCCCCCGTCATCAGGA
TGAAGAGCCGTGTACACCTCCCTATTCAGCGATGCGGTCATGAGCCCTCT
CTTTCGCGGGTATGTGCTAGATCGGGTTACCCCCCTCGCCTATAGAGGTC
GCCGACGTTCGTCGATCCATTGCTGCACAACAGAGAGGGCAGCCACGATC
TGCCGAAAAGGATGGATTTGGAAAACATGTGATGGAGAGCTTTGGTTAGC
CCTATCGGTCGGTGTTGGATCACACCCTCTTGGTTGTGGGGCAATCGAGC
TTTTCGGACGGTGGTTTGGCGACGGTGCGATCACCCGCACAGTACGTACG
GCAAAAGTCTAACACAGAGTCGAAGCAACGGCTGCTTTGCGGGATTGCTT
TGCATGTGACGCTGTTGTGTGCACTCCAGTCCCATCGTCTTCGTACTCCC
CACCCCTTTCCGTCGTTGGACGTGCTTGAAATAGATTGCCGCACCCTTGT
TATATTTTACTTGCACCATGGATTGCTGTCGGAGTTTTTTCACCGTTTGC
GTGCCCCCCTCTGCTTTCACCCGGTGTATGCATGCGGCGGAATAGTTGAC
TTTTGGGTTGTACACCCCGGAGGGAGTGCGATCATCACGGCGGTGCAGAA
CGGGCTCGGGCTGACGGAGGAGCACACGGCAGACTCTTGGGCGGTGCTGG
GGGAGTACGGGAACATGCTCTCGCCCACCAGCATGTTTGTGCTGTCGAGG
TAAAGTGGAAACGGCGAGAGAAAGAGAAGGAAAGAGAGAGTGACGGAGAG
AGAGAGCGACAGACAGATAGATGGACAAAGCAGAGGGAGAGAGAGCAAGA
CAGACAGACAGACAGACAGAGATAAGAGAGGTGGCGACAGACACACACAG
AGAGACGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGACAGACT
GAATCTCGGAGTGAGGATTTGGCTAGTGCCTCTTGGGAGGTGGTTTTACG
AACGCTCATGTACATTCTGGAGCATTTTGCCGATAGGTGAAGGGGGGGAC
TGTTGGGGGCTTCAATCAAGCGCGCCAACGCCCTTTTGTGTTATTGCCAC
AGCTTTTTTTCTGTTTCTGACGCTTTTTTCTACCCTGTGAAGTAGTTGCT
CGTGTCCCCTGGTTGATGAGTCGATTCAACCACAAAATCAAGACCTAACC
AATACAGGAGAAGGGTCAGAAGTATTCCCAAACAAGTTCTGGTTGGCACA
GGAGGTTGGCACGGATTTTATGGCCCTCTTCCGTTGGTCTCCATGGCGGC
AAGCTCAGAGCGTAGCCCTGCTCTCCGTATCAGGCCATTCAACATGGATT
GGCGAACGGCAAAAGAATATTACGCAGATGTCAGCCGAAAGTACAAGCCG
CAAAGCGATTGTTTCTCGAGCATGGCCAAAAGTCTTACACCGAATGCAGG
GTTTCGTGTCGTTATTGTCGTTATCGCACATCGCACCCCCCGGTACGATA
CCACGGATGATGCCGTTCTTGCTTAAACTCCGATGGGTGCGAAGACCCCG
ATGGGTTTGTCCACTCGCGGCTGGTGCGCGAAACACGTGTGTCGAGGAAG
GTGCGCACACATGTGCCCGGACGGGACGGAACACTTGCACAAACACGCAC
AGACTGACAATCGAGAACACGAAGGAAGCGTTGGGATGACTTTGCTTCGG
CAGCGTTCTTATTGTTTCTACCCTTCTTTTTTTGGTTCTGTTTTGTTTAA
TTCGTATTTTTTCGTTCTTCTCTGCAGGGTCTTCCAACGCCACAAGGCAA
TTATCGCCGAGGGGAAGGCAGGGTATCAAACGGGGATGGCCATAGCCTTC
TCTCCAGGGGTTGGGGCAGAGGGTATTCTCTTCAAGCAGATCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16351:82..3726-

>mRNA_Ecto-sp13_S_contig16351.4594.1 ID=mRNA_Ecto-sp13_S_contig16351.4594.1|Name=mRNA_Ecto-sp13_S_contig16351.4594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16351:82..3726- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGTGCGTAGAGCTCAGTTCGCTGCACGCGAATTTCCAGGATAACAC
CGCCAACGCCGTGAGCATGGCGCTTTTCGCCGACGGGTGCGCGGCAACCG
TCCTGAAGGGGGCTAGAAAAGCTGAGTGCCCGAAGGGAAGCCTCGTCGTC
GCGGACAGCCATTCGTGGCTCATCGAGGACAGCGAGGACGGCATCACTGT
CGACATCGAGCCCAACTCTATCGTGTGCGTCCTTTCCAAGCTCGTTCCTA
AGATCGTCGCGAATAGCGTGGGACCATTCGTGGACGGGTTCTTGGGCAGG
AACAGCATGAAGCGAAAGGACGTTGACTTTTGGGTTGTACACCCCGGAGG
GAGTGCGATCATCACGGCGGTGCAGAACGGGCTCGGGCTGACGGAGGAGC
ACACGGCAGACTCTTGGGCGGTGCTGGGGGAGTACGGGAACATGCTCTCG
CCCACCAGCATGTTTGTGCTGTCGAGGGTCTTCCAACGCCACAAGGCAAT
TATCGCCGAGGGGAAGGCAGGGTATCAAACGGGGATGGCCATAGCCTTCT
CTCCAGGGGTTGGGGCAGAGGGTATTCTCTTCAAGCAGATCTAG
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