prot_Ecto-sp13_S_contig1634.4592.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1634.4592.1
Unique Nameprot_Ecto-sp13_S_contig1634.4592.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 423 bits (1087), Expect = 4.000e-143
Identity = 318/360 (88.33%), Postives = 321/360 (89.17%), Query Frame = 0
Query:   46 MSLPRPGGRSQGGETKSGGXXXXXXXXXXXXXXXXXXXXX--PSAFAGYTPPSANPPNPYTSGTGANSAXXXXXXXXXXXXXXXXXXXXXXXXAFGGAGAPQGXXXXXXXXXXXXXXXXVDGRNQYGFSNSGGGGGLDTLGASMGAVAGAAMGMAAGGAQXXXXXXXXXXXXXXXXXXXXQPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            MSLPRPGGR QGGE KSG XXXXXXXXXXXXXXXXXXXXX  PSAFAGYTPPSANPPNPYTS TGA+  XXXXXXXXXXXXXX XXXXXXX XAF     PQ XXXXXXXXXXXXXXXX                  DTLGASMGAVAGAAMGMAAGGAQ   XXXXXXXXXXXXXXX  QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVL+KDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDL+AYTGYK
Sbjct:    1 MSLPRPGGRPQGGEIKSGXXXXXXXXXXXXXXXXXXXXXXXXPSAFAGYTPPSANPPNPYTSATGASXXXXXXXXXXXXXXXXYXXXXXXXGXAFXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLGASMGAVAGAAMGMAAGGAQRKAXXXXXXXXXXXXXXX--QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYK 358          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 3.570e-118
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0
Query:  224 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD-GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD GRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK
Sbjct:   52 QPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 232          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.490e-55
Identity = 101/167 (60.48%), Postives = 124/167 (74.25%), Query Frame = 0
Query:  240 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDE-VKDDGRP--KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            MLN+GG +A +F+ SN+A+YQP VSG+W  LK YF VDN YVL+K KVLLL VLKK W R+P+E+     DG    KF RP  D NAPDLY+PLM+FIT  L++G+ KG A+        F+PEVL EVTSS +V QLLEVLL+RLGLYLL +PA +LDLVA+TGYK
Sbjct:    1 MLNMGGTMAKSFISSNMARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRAS-------NFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYK 160          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.440e-38
Identity = 82/189 (43.39%), Postives = 118/189 (62.43%), Query Frame = 0
Query:  237 NAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDG----------------------RPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            N+Q  ++G  +   +L ++V++Y P V+  W+ LK YF V++ YV +KL  L+    K+ W R     ++KD G                      RP+++ P+ D NAPDLY+PLM+F+T+VL+TGYAKG+         +F+PEVL EVTSSC+V QLLE+ +IRLGLYLL +PA +LDL+A TGYK
Sbjct:  106 NSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRR-----QMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK-------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYK 282          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A7S1TS60_9STRA (Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS60_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.050e-34
Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0
Query:  235 GMNAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            G +  M+N+G N A  F    +    P  + ++ +LK YF+V+N YVL+KL +L++   KK W R  S+D    D   KF RP+ D NAPDLY+PLM+ +TFVL+TG+ KG+        G FSP+VL  V +SC VT +L +L++  GL+        LDL AYTGYK
Sbjct:   42 GFDPGMVNMGANAAGQFFNGQMQNVSPAAATFYRSLKYYFSVNNSYVLRKLGILIMPWNKKRWARETSDD---GDVNKKFARPLHDENAPDLYIPLMALVTFVLVTGFVKGTG-------GEFSPDVLQNVLTSCAVTDVLLMLIMYGGLFFTQLSVPTLDLYAYTGYK 200          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A024GGU5_9STRA (Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.820e-33
Identity = 71/164 (43.29%), Postives = 99/164 (60.37%), Query Frame = 0
Query:  240 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            M  V  + AS+FL+     Y P   G W  LK YFTVDN YV  +LK+LL     K+W R+    +  D  + K+  P+ D+NAPDLY+PLM F+T++L+ GY KG++         FSP+V+    S C+V QL+EV ++   LYLLNS    LDL+A++GYK
Sbjct:   80 MAGVAMSTASDFLQKQSQAYIPGAYGVWGRLKHYFTVDNNYVKNRLKILLFPFWHKNWRRI---GDTTDPNQNKYAPPINDINAPDLYIPLMGFLTYILIVGYTKGAS-------NQFSPDVIGADASYCLVMQLIEVAILASFLYLLNSSVSFLDLIAFSGYK 233          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A2P4YJM1_9STRA (Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YJM1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.200e-32
Identity = 73/176 (41.48%), Postives = 109/176 (61.93%), Query Frame = 0
Query:  233 PDGMNA----QMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            PD MN      M  +  N A +FL+     Y P   G W +LK YFTV+N YV  +LK+LLL    K+W R+ + ++  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  110 PDFMNQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 276          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: F0WGG6_9STRA (Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGG6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 7.020e-32
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0
Query:  240 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            +  V  + AS+F++     Y P   G W  LK YFTVDN YV  +LK+LL     K+W RL    +  D    K+  P+ D+NAPDLY+PLM F+T++L+ GY KG++         FSP+V+    S C+V QLLEV ++   LYLLNS    LDL+A++GYK
Sbjct:  160 VAGVAMSTASDFIQKQSQAYIPGAYGVWERLKHYFTVDNNYVKNRLKILLFPFWHKNWRRL---GDTTDPNYNKYAAPINDINAPDLYIPLMGFLTYILIVGYTKGAS-------NQFSPDVIGADASYCLVMQLLEVAILASFLYLLNSSVSFLDLIAFSGYK 313          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: A0A421H1I6_9STRA (Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1I6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.090e-31
Identity = 73/176 (41.48%), Postives = 108/176 (61.36%), Query Frame = 0
Query:  233 PDGMNA----QMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            PD MN      M  +  N A +FL      Y P   G W ++K YFTV+N YV  +LK+LLL    K+W R+ + D+  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  154 PDFMNQFSSNPMAGLAMNSAQDFLHKQSELYLPGAYGIWGSIKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGDQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 320          
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Match: G4YM91_PHYSP (Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID=G4YM91_PHYSP)

HSP 1 Score: 133 bits (334), Expect = 1.770e-31
Identity = 69/165 (41.82%), Postives = 105/165 (63.64%), Query Frame = 0
Query:  240 MLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDGRP-KFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYK 403
            M  +  N A +FL+     Y P   G W +LK YFTV+N YV  +LK+LLL    K+W R+ + ++  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG++         FSP+V+T+  S C+V QL+E+ ++   LY+LNS    LDLV+++GYK
Sbjct:  155 MAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDCNAPDLYIPLMGFLTYILIVGYSKGTS-------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYK 310          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1634.4592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNN8_9PHAE4.000e-14388.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLH1_ECTSI3.570e-11899.45Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YSN9_9STRA2.490e-5560.48Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA2.440e-3843.39Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S1TS60_9STRA8.050e-3443.20Protein YIF1 n=2 Tax=Phaeomonas parva TaxID=124430... [more]
A0A024GGU5_9STRA3.820e-3343.29Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 Re... [more]
A0A2P4YJM1_9STRA4.200e-3241.48Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID... [more]
F0WGG6_9STRA7.020e-3243.29Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=8... [more]
A0A421H1I6_9STRA1.090e-3141.48Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=... [more]
G4YM91_PHYSP1.770e-3141.82Protein YIF1 n=2 Tax=Phytophthora TaxID=4783 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005578Yif1 familyPFAMPF03878YIF1coord: 241..403
e-value: 7.8E-40
score: 136.9
IPR005578Yif1 familyPANTHERPTHR14083YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEINcoord: 214..403

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1634contigEcto-sp13_S_contig1634:11811..15421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1634.4592.1mRNA_Ecto-sp13_S_contig1634.4592.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1634 10857..15421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1634.4592.1 ID=prot_Ecto-sp13_S_contig1634.4592.1|Name=mRNA_Ecto-sp13_S_contig1634.4592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MRKQSRQVVLSPYPIPTSPITCLIPHVYVHIPKEENPAKAYYYGAMSLPR
PGGRSQGGETKSGGGGSGTGYGGGAKTTAAAAAAAPSAFAGYTPPSANPP
NPYTSGTGANSAAGAGSGLSFGGGGGYGGGGGFGGGAFGGAGAPQGFGGG
GATAGGALGGGGVDGRNQYGFSNSGGGGGLDTLGASMGAVAGAAMGMAAG
GAQQKAGGGGGGGQQQQQQQQQQQPLDWHQWTPDGMNAQMLNVGGNVASN
FLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRL
PSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAAL
SDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYT
GYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005578Yif1_fam