prot_Ecto-sp13_S_contig16328.4587.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16328.4587.1
Unique Nameprot_Ecto-sp13_S_contig16328.4587.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length252
Homology
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BLAST of mRNA_Ecto-sp13_S_contig16328.4587.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 7.860e-74
Identity = 151/198 (76.26%), Postives = 156/198 (78.79%), Query Frame = 0 
Query:   55 CPSPCGLYVATADKADAIGTNGKPRAPLSCEVCTTTILPLHTYWSRKITDKVSAYSHADPDDCNPPEAGTGICSKCSASDVDLFVVNTDGAEQCVDCFDRKRNSVLRAAQHTCVEKRARYNKRNNN--TVTPXXXXXXXXXXPPVPSTSAAAAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTNTTRAAKKPK 250
            CPSPCGLYVATAD ADAIGTNGKPRAPLSCEVCTTTI P HTYWSRKITDKVSAY+HADPDDCNPP A +G C+KC A+DVDLFV  TDGAEQCV CFDRKR +VLRAAQ TCVEKRARYNKRNN   TVTP          PP PSTSAAAAKPXXXXXXXXXXXXXXX                DTNTTRAAKKPK
Sbjct: 3359 CPSPCGLYVATADDADAIGTNGKPRAPLSCEVCTTTIPPRHTYWSRKITDKVSAYTHADPDDCNPPGADSGNCTKCPATDVDLFVFTTDGAEQCVQCFDRKRVTVLRAAQATCVEKRARYNKRNNTVATVTPTTSPTK----PPAPSTSAAAAKPXXXXXXXXXXXXXXX----------------DTNTTRAAKKPK 3536
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16328.4587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE7.860e-7476.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16328contigEcto-sp13_S_contig16328:66..2424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16328.4587.1mRNA_Ecto-sp13_S_contig16328.4587.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16328 41..2450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16328.4587.1 ID=prot_Ecto-sp13_S_contig16328.4587.1|Name=mRNA_Ecto-sp13_S_contig16328.4587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=252bp
MREDAQQLKQADAAVAAPTVFKQLPSFHINSAEYICILCGAPGSAFTRSK
FSLMCPSPCGLYVATADKADAIGTNGKPRAPLSCEVCTTTILPLHTYWSR
KITDKVSAYSHADPDDCNPPEAGTGICSKCSASDVDLFVVNTDGAEQCVD
CFDRKRNSVLRAAQHTCVEKRARYNKRNNNTVTPTVTPTVSPTKPPVPST
SAAAAKPAAAKPATAKPAAAKPAAAKPAATKPAAAKPADTNTTRAAKKPK
H*
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