mRNA_Ecto-sp13_S_contig16326.4586.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI) HSP 1 Score: 275 bits (703), Expect = 4.830e-83 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPARSYGDILGPLEQGVTGKEWMGDRTPEEAQGVTAEVAPQET 424
VRMNEMLS+LLTYKLKGEDVIR SGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASG+TFEVKSDLAFSTLW+GAPQG PARSYGDILGPLEQGVTGKEWMGDRTPEEAQGVTAEVAPQET
Sbjct: 336 VRMNEMLSHLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLWQGAPQGAPARSYGDILGPLEQGVTGKEWMGDRTPEEAQGVTAEVAPQET 476
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.350e-65 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPARSYGDILGPLEQGVTGKEWMG 367
VRMNEMLSYLLTYKLKGEDVIR SGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASG+TFEVKSDLAFSTLWEGAPQGTPARSYGDILGPLEQGVTGKE G
Sbjct: 519 VRMNEMLSYLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLWEGAPQGTPARSYGDILGPLEQGVTGKEVDG 640
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC) HSP 1 Score: 141 bits (356), Expect = 7.730e-33 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWE---GAPQGTPARSYGDILGPLEQGVTGK 355
VRMN+ML +LTYKLKGEDV+R SG+ ++IRPCALTEEPAGAP+ +GQGD +KGKISR+D+A+L V+SLLTP A+ T+E+K L FS W+ AP+ P + ++L P + G+ GK
Sbjct: 385 VRMNDMLGGILTYKLKGEDVVRDSGVTYSVIRPCALTEEPAGAPLQIGQGDEIKGKISREDVADLVVASLLTPAAANKTYEIKCTLPFSEPWQPKADAPRERPLTFWAELLEPTKTGIDGK 505
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A7S3U8L1_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U8L1_9CHLO) HSP 1 Score: 142 bits (358), Expect = 1.390e-32 Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPA-RSYGDILGPLEQGVTGKEWMG---DRTPEEA 388
V++N+ L +L+YKLKGED++R +G+P I+RPCALTEEPAGA ++V QGD +KGKISR+D+AEL V+ L PEAS TFE+KS + FST WE PQ P R +G +L L++ VTGK G R PE+A
Sbjct: 504 VKLNDALGGILSYKLKGEDMVREAGMPFAIVRPCALTEEPAGAELLVDQGDTIKGKISREDVAELCVALLSQPEASSTTFEIKSTVPFSTPWEVDPQNPPPPREWGPLLSGLQKKVTGKTIEGVYTGRQPEDA 636
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A022QLG4_ERYGU (Uncharacterized protein (Fragment) n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLG4_ERYGU) HSP 1 Score: 130 bits (326), Expect = 9.690e-31 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPA-RSYGDILGPLEQGVTGKEWMGDRTP 379
VR+N+ L ++LTYKLKGED+IR SGIP TIIRPCALTEEPAGA +IV QGD + GKISRD++A + +++L +P A TFEVKS + FS + P+ P + Y L+ G+TGKE + P
Sbjct: 129 VRLNKELDFILTYKLKGEDLIRESGIPYTIIRPCALTEEPAGADLIVEQGDNITGKISRDEVARMCIAALESPYACDKTFEVKSVIPFSEPYTVDPENPPPEKDYNVYFQTLKDGITGKESLEQSAP 255
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A0G4GLY8_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GLY8_9ALVE) HSP 1 Score: 136 bits (343), Expect = 1.110e-30 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPARSYGDILGPLEQGVTGKEWMGDRTPEEAQ 391
+R+NE L Y+L +KL+GED +R S +P T+IRPCAL EE GAP+ +GQGDY+KGK+SRD +A+LA+ +L P+ G TFEVK L FS ++ G + Y +LG L+ GVTGK + R PE+A+
Sbjct: 490 IRLNESLGYILFWKLRGEDAVRESDLPFTVIRPCALVEEAGGAPLEIGQGDYIKGKVSRDAVADLAIEALFRPKLEGTTFEVKCALPFSEVYSPPAGGARSPDYDSLLGGLKMGVTGKHMLIPR-PEDAE 618
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A2P6Q4X2_ROSCH (Putative NAD(P)-binding domain-containing protein n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q4X2_ROSCH) HSP 1 Score: 127 bits (319), Expect = 1.590e-30 Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPA-RSYGDILGPLEQGVTGKE 358
VR+N+ L ++LT+KLKGED+IR SGIP TI+RPCALTEEPAGA +I QGD + GKISR+++A++ V++L +P A+G TFEVKS + FS + P+ P + Y L+ G+TGKE
Sbjct: 64 VRLNKELDFILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVAQICVAALESPYATGKTFEVKSVIPFSEPFTVDPENPPPEKDYDVYFKTLKDGITGKE 183
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: UPI00098E195D (uncharacterized protein At2g34460, chloroplastic-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E195D) HSP 1 Score: 124 bits (311), Expect = 7.390e-30 Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPA-RSYGDILGPLEQGVTGKE 358
VR+N+ L ++LTYKLKGED+IR SGIP TI+RPCAL+EEPAGA +I QGD + GKISR+++A + +++L +P A TFEVKS + FS + P P + Y L++G+TGKE
Sbjct: 27 VRLNKELGFILTYKLKGEDLIRESGIPYTIVRPCALSEEPAGADLIFDQGDNITGKISREEVARICIAALGSPYACNKTFEVKSTIPFSEPFTVDPSNPPPEKDYDVYFNTLKEGITGKE 146
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A7I8JNY8_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JNY8_SPIIN) HSP 1 Score: 134 bits (336), Expect = 8.090e-30 Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPA-RSYGDILGPLEQGVTGKEWMGD 370
VR+N+ L ++LTYKLKGED+IR SGIP TI+RPCALTEEPAGA +I QGD + GKISR+++A++ +++L +P A TFEVKS + FS + P P + Y PL G+TGKE +G+
Sbjct: 471 VRLNKELDFILTYKLKGEDLIRESGIPYTIVRPCALTEEPAGADVIFDQGDNITGKISREEVAKICIAALESPNACDKTFEVKSTIPFSETYTVDPSSPPPEKDYSTYFAPLRDGITGKEALGE 594
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Match: A0A396GNE5_MEDTR (Putative NAD(P)-binding domain-containing protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GNE5_MEDTR) HSP 1 Score: 125 bits (314), Expect = 1.000e-29 Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 2
Query: 2 VRMNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGVTFEVKSDLAFSTLWEGAPQGTPARSYGDI-LGPLEQGVTGKE 358
VR+N+ L Y+LTYKLKGED+IR SGIP I+RPCALTEEPAGA +I QGD + GKISR+++A + V++L +P A TFEVKS + FS + P+ P+ DI L++G+TGKE
Sbjct: 72 VRLNKELDYILTYKLKGEDLIRESGIPYVIVRPCALTEEPAGADLIFDQGDNITGKISREEVARMCVAALESPYACDKTFEVKSVIPFSEPFTVDPENPPSEKDYDIYFKNLKEGITGKE 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16326.4586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16326.4586.1 >prot_Ecto-sp13_S_contig16326.4586.1 ID=prot_Ecto-sp13_S_contig16326.4586.1|Name=mRNA_Ecto-sp13_S_contig16326.4586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp MNEMLSYLLTYKLKGEDVIRGSGIPATIIRPCALTEEPAGAPMIVGQGDYback to top mRNA from alignment at Ecto-sp13_S_contig16326:305..3100- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16326.4586.1 ID=mRNA_Ecto-sp13_S_contig16326.4586.1|Name=mRNA_Ecto-sp13_S_contig16326.4586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2796bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16326:305..3100- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16326:305..3100- >mRNA_Ecto-sp13_S_contig16326.4586.1 ID=mRNA_Ecto-sp13_S_contig16326.4586.1|Name=mRNA_Ecto-sp13_S_contig16326.4586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=420bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16326:305..3100- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |