prot_Ecto-sp13_S_contig16322.4581.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16322.4581.1
Unique Nameprot_Ecto-sp13_S_contig16322.4581.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: D8LQ33_ECTSI (Endo-1,3-beta-glucanase N-terminal, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ33_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 9.300e-45
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 MRWLSVFLVVVGIGMIPAERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71
            MRWLSVFL VVGIGMIPAERVLVWEDNFDGNSLDEAVW LNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ
Sbjct:    1 MRWLSVFLHVVGIGMIPAERVLVWEDNFDGNSLDEAVWALNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 6.180e-38
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
Query:    1 MRWLSVFLVVVGIGMIPAERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71
            MRWLSVFL  VGIGMIPAERVLVWEDNFDG+SLDEAVW LNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ
Sbjct:    1 MRWLSVFLHSVGIGMIPAERVLVWEDNFDGDSLDEAVWALNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: UPI001128F37D (glycoside hydrolase family 16 protein n=1 Tax=Flavobacterium jejuense TaxID=1544455 RepID=UPI001128F37D)

HSP 1 Score: 73.6 bits (179), Expect = 4.110e-14
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MRWLSVFLVVVGIGMIPAE-RVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            M+   V L+V   G+     + LVWE+NFDGN+LDE VW    GNGC     +CGWGNNE Q YT +NH+V
Sbjct:    1 MKHYLVLLLVFNFGLAQNNSKKLVWEENFDGNALDEKVWNFELGNGCPN---ICGWGNNESQIYTNENHKV 68          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A2E4P871_FLASP (Laminarinase n=2 Tax=Flavobacterium TaxID=237 RepID=A0A2E4P871_FLASP)

HSP 1 Score: 72.8 bits (177), Expect = 8.330e-14
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    4 LSVFLVVVGIGMIPAERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            +S+F        +  +  L+WE+NFDGN LDE+VW    G+GC     +CGWGNNE+Q YT DNH V
Sbjct:    7 ISLFCTAAAFAQVKNKGKLLWEENFDGNKLDESVWNYELGDGCPN---ICGWGNNERQIYTRDNHTV 70          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A2N2ZEA4_9BACT (Laminarinase n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-13 TaxID=2013681 RepID=A0A2N2ZEA4_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 2.210e-13
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   19 ERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71
            ER LVWE+NFDGN LD AVW    GNGC      CGWGNNE Q YT+ NH+++
Sbjct:   21 ERTLVWEENFDGNQLDTAVWNFELGNGCPHN---CGWGNNELQFYTDQNHRLE 70          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: UPI00146A82E7 (glycoside hydrolase family 16 protein n=1 Tax=Flavobacterium solisilvae TaxID=1852019 RepID=UPI00146A82E7)

HSP 1 Score: 71.6 bits (174), Expect = 2.210e-13
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   19 ERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            ER LVW++NF+GN+LD +VW    GNGC      CGWGNNE+Q YT+DNH++
Sbjct:   21 ERKLVWQENFNGNTLDTSVWNFELGNGCPNN---CGWGNNERQVYTKDNHEI 69          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A7Y1YMH6_9FLAO (Glycoside hydrolase family 16 protein n=1 Tax=Eudoraea sp. TaxID=1979955 RepID=A0A7Y1YMH6_9FLAO)

HSP 1 Score: 71.2 bits (173), Expect = 4.090e-13
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   22 LVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            L+WEDNFDG  L+EA W    G+GCDQG  +CGWGNNE Q YT+ NH+V
Sbjct:   48 LIWEDNFDGTVLNEADWNFELGDGCDQG--ICGWGNNEPQLYTDTNHEV 94          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: UPI000428E119 (glycoside hydrolase family 16 protein n=1 Tax=Flavobacterium soli TaxID=344881 RepID=UPI000428E119)

HSP 1 Score: 70.5 bits (171), Expect = 5.880e-13
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   19 ERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            +R L+WE+NFDG +LDE VW    GNGC      CGWGNNE+Q YT+DNH++
Sbjct:   20 KRKLIWEENFDGKALDEKVWNFELGNGCPN----CGWGNNERQLYTKDNHKL 67          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A1K2IHY7_9FLAO (Glycosyl hydrolases family 16 n=1 Tax=Flaviramulus basaltis TaxID=369401 RepID=A0A1K2IHY7_9FLAO)

HSP 1 Score: 70.5 bits (171), Expect = 6.090e-13
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   20 RVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQV 70
            + LVWE+NFDGNSL+E  W    GNGC     LCGWGNNE Q YT++NH+V
Sbjct:   22 QTLVWEENFDGNSLNEETWNFELGNGCPN---LCGWGNNELQLYTKNNHEV 69          
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Match: A0A0A2LQS8_9FLAO (Laminarinase n=2 Tax=Flavobacterium TaxID=237 RepID=A0A0A2LQS8_9FLAO)

HSP 1 Score: 70.5 bits (171), Expect = 6.300e-13
Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   19 ERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGDGLCGWGNNEQQTYTEDNHQVQ 71
            ER L+WE+NFDG+ L+E+VW    G+GC     +CGWGNNE+Q YT+DNH+++
Sbjct:   23 ERELLWEENFDGSELNESVWNFELGDGCPN---ICGWGNNERQVYTKDNHKLE 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16322.4581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ33_ECTSI9.300e-4597.18Endo-1,3-beta-glucanase N-terminal, family GH16 n=... [more]
A0A6H5KV09_9PHAE6.180e-3894.37GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
UPI001128F37D4.110e-1450.70glycoside hydrolase family 16 protein n=1 Tax=Flav... [more]
A0A2E4P871_FLASP8.330e-1447.76Laminarinase n=2 Tax=Flavobacterium TaxID=237 RepI... [more]
A0A2N2ZEA4_9BACT2.210e-1360.38Laminarinase n=1 Tax=Bacteroidetes bacterium HGW-B... [more]
UPI00146A82E72.210e-1357.69glycoside hydrolase family 16 protein n=1 Tax=Flav... [more]
A0A7Y1YMH6_9FLAO4.090e-1363.27Glycoside hydrolase family 16 protein n=1 Tax=Eudo... [more]
UPI000428E1195.880e-1357.69glycoside hydrolase family 16 protein n=1 Tax=Flav... [more]
A0A1K2IHY7_9FLAO6.090e-1360.78Glycosyl hydrolases family 16 n=1 Tax=Flaviramulus... [more]
A0A0A2LQS8_9FLAO6.300e-1354.72Laminarinase n=2 Tax=Flavobacterium TaxID=237 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 15..71
e-value: 7.8E-12
score: 47.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.774
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 19..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16322contigEcto-sp13_S_contig16322:261..645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16322.4581.1mRNA_Ecto-sp13_S_contig16322.4581.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16322 261..645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16322.4581.1 ID=prot_Ecto-sp13_S_contig16322.4581.1|Name=mRNA_Ecto-sp13_S_contig16322.4581.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
MRWLSVFLVVVGIGMIPAERVLVWEDNFDGNSLDEAVWTLNTGNGCDQGD
GLCGWGNNEQQTYTEDNHQVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf