mRNA_Ecto-sp13_S_contig1631.4572.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE) HSP 1 Score: 955 bits (2469), Expect = 0.000e+0 Identity = 466/484 (96.28%), Postives = 468/484 (96.69%), Query Frame = 1
Query: 58 MPPTRVWVKQGLDSHRSAQVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPK--------------DALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAMLCSDFETWNTAHLLARMAGEGYGALLPPH 1467
MPPTRVWVKQGLDSHRS QVLLVPLGNIPP+VYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPK DALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKC+EALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAMLCSD ETWNTAHLLARMAGEGYGALLPPH
Sbjct: 1 MPPTRVWVKQGLDSHRSVQVLLVPLGNIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKCLSVCVLSLLLRPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCEEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAMLCSDSETWNTAHLLARMAGEGYGALLPPH 484
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: D8LGF8_ECTSI (OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF8_ECTSI) HSP 1 Score: 804 bits (2077), Expect = 2.070e-291 Identity = 390/405 (96.30%), Postives = 396/405 (97.78%), Query Frame = 1
Query: 58 MPPTRVWVKQGLDSHRSAQVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPR--WEEALAALLRALS 1266
MPPTRVWVKQGLDSHRSAQVLLVPLGNIPP+VYAKYCEILRRFSTIPMQNLTAPGDWNRQN ALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGG ADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL+DMAKDKELERAGQEGSSTWTVLAEAVVSEKC+EALAVFSRHPPLGSLEVELCFKTARFHACAQPTPR + A +AL R +S
Sbjct: 1 MPPTRVWVKQGLDSHRSAQVLLVPLGNIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNSALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGRADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLKDMAKDKELERAGQEGSSTWTVLAEAVVSEKCEEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRVSGDAASSALRRRVS 405
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A835ZHG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG4_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.420e-85 Identity = 150/364 (41.21%), Postives = 200/364 (54.95%), Query Frame = 1
Query: 67 TRVWVKQGLDSHRSAQVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGH-----ADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAA------------GRAVAVLRGNNDAAPPLTSWYEREE----------------------------VLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL 1023
+ VWVKQ L SH QVLLVPLG IP +VY +YC + +R S +PMQ+LTAPGDW RQN +HF+W+EG F+FHF++ TTDGGLS+W DYQA+RRV A+G+VH PSC G AD L+ + VA Y H R+F F HSFE G P D RDI+ PPE E EGG +A L+++AV++I + ++ + ++ S A G G + A PPL S + ++ +D A+RR GRL KW+GD LL G+PKDA+E Y + +E A DPLWHAG LEG+AA L A++D + PT + L+
Sbjct: 2 SNVWVKQTLASHSKVQVLLVPLGGIPKDVYDRYCSLFKRLSAVPMQDLTAPGDWTRQNCPFRHFSWTEGAFHFHFVEDGTTDGGLSEWGDYQAHRRVYVALGIVHEPSCRRGDGDKIGADLSLLQAELALAVAPYPHATLQRIFVFEHSFEAGSIPGY-DANRDIILPPEPEGEGGAELLRRFLAEPLHNIAVALITQIEGWVRAYAAALSGGVAGKLSQYMASARGGGXXXXXXAGGDGALPPLRSPLDTDDDNPLANMGASSASLMSAASAVSLTGGGGKAADRARARRRWGRLRKWLGDLALLAGTPKDAVELYDAAAAEL-AKADPLWHAGALEGFAAALVALADDETPTAVPPEIFKLI 363
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A4D9D6X0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6X0_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.900e-42 Identity = 106/345 (30.72%), Postives = 165/345 (47.83%), Query Frame = 1
Query: 97 SHRSAQVLLVPLGNIPPNVYAKYCEILRR-FSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQ-DTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRD------------IVFPPEQE-FEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPP------------------------------------SAAGRAVAVLRGNNDAA--PPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAM 972
+HR +V +VPLG +P + Y +LRR F +PM NL+ PG W +++ KHF+W +G ++D+ + S+W+D++A+RR IG+VH PSC G +E +F+ + + H A ++F FGHSF G+ PQ++ ++FPPE + E G S E HM V L D+AV ++ L A++ ++ G+ +A LR D P L + + GR KW+GD CLL G+P+DALE Y+Q+++E KA+ +PLW AG LEG+ A + +
Sbjct: 16 AHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFEAFRRTWAVIGIVHLPSCAPGTVG--GVEAEFHARLKEFPHALAKKVFCFGHSFGAGEGGMDGAPQQESLETLYRHKEELVIFPPEGDPKERGVSMVEAHMGVMLSDLAVVVLSRLEAEVAGAKAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKGTGLAKRGGQWLAQLRSPADGGGGPRLARGGQAGGQHVELGGGGGDRGRWGKWVGDLCLLAGTPQDALEAYAQALAECKAAGEPLWQAGALEGWIASVGVL 358
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A6A3NFJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NFJ8_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.440e-29 Identity = 139/504 (27.58%), Postives = 219/504 (43.45%), Query Frame = 1
Query: 46 LTSTMPPTRVWVKQGLDSHRSAQVL--LVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEG-CFNFHFIDQ----DTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGG-STTELHMAVSLYDVAVSIIKNLAADIK--TWRSSASPPSAAGRAVAVLRGN---------NDAAPPL----------------TSWYEREEVLS------------DSKNA--KRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETK--------ASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSV-PDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAML 1383
++S+ PP R W R AQ L LVP+G+IPP+V+A Y +L+R S +P+++LT PG + + + +W+ G F F+ D DG ED QA RRV+G +GV H PS H + +QF V + + ++FAF H+FE + ++FP E +G G ST LH+ V + +AV+ + L + I+ T ++AS P A +L N A+ PL TS + S D +N KR++ R K +GD +L+ DAL+HY+ ++ + A D LW A LEG+ CL++ + T ++A + AK +E ++L E + A+A R G +V T R W+ L R L + P++ Q+E I+ + + E +G +R+ ALF H +A L
Sbjct: 1 MSSSAPPPR-WT-------RPAQFLVYLVPVGDIPPDVFASYARLLQRHSDLPLRSLTRPGGYAAELSPFRSLDWAGGGVLRFRFVSAAERVDACDG-----EDVQASRRVVGVLGVCHSPSLTL-HGGLRAAYEQFEASVRRFPGLLLHKLFAFEHAFEDATAAECEGLADLVMFPVHHELQGTGESTVSLHLQVVMDTLAVNALMALESAIRSATASAAASTPRVGDLASVLLDVNVEPQQQQTQQSASSPLVLSRDVKADAAFTASPTSRATGPSLTSIPSPLAAGVAALDPRNRRRKRQLARREKLLGDYSVLVSCISDALDHYTVAVEMLREEERRSGGAPGDALWLAAALEGFVFCLNSEAQDKFSTELVEKASEAVALYAKAGTVELE--------SLLIENLGWYYAAVAMATLRRASTSGEAKVLESLWTKRL--------LWD----VLERGLMLFPELQPQRQVEFLIQTSRMLETVGHRRRVALFLHEAASL 470
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A6A3P5S4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P5S4_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.910e-29 Identity = 139/504 (27.58%), Postives = 219/504 (43.45%), Query Frame = 1
Query: 46 LTSTMPPTRVWVKQGLDSHRSAQVL--LVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEG-CFNFHFIDQ----DTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGG-STTELHMAVSLYDVAVSIIKNLAADIK--TWRSSASPPSAAGRAVAVLRGN---------NDAAPPL----------------TSWYEREEVLS------------DSKNA--KRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETK--------ASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSV-PDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAML 1383
++S+ PP R W R AQ L LVP+G+IPP+V+A Y +L+R S +P+++LT PG + + + +W+ G F F+ D DG ED QA RRV+G +GV H PS H + +QF V + + ++FAF H+FE + ++FP E +G G ST LH+ V + +AV+ + L + I+ T ++AS P A +L N A+ PL TS + S D +N KR++ R K +GD +L+ DAL+HY+ ++ + A D LW A LEG+ CL++ + T ++A + AK +E ++L E + A+A R G +V T R W+ L R L + P++ Q+E I+ + + E +G +R+ ALF H +A L
Sbjct: 1 MSSSAPPPR-WT-------RPAQFLVYLVPVGDIPPDVFASYARLLQRHSDLPLRSLTRPGGYAAELSPFRSLDWAGGGVLRFRFVSAAERVDACDG-----EDVQASRRVVGVLGVCHSPSLTL-HGGLRAAYEQFEASVRRFPGLLLHKLFAFEHAFEDATAAECEGLADLVMFPVHHELQGTGESTVSLHLQVVMDTLAVNALMALESAIRSATASAAASTPRVGDLASVLLDVNVEPQQQQTQQSASSPLVLSRDVKADAAFTASPTSRATGPSLTSIPSPLAAGVAALDPRNRRRKRQLARREKLLGDYSVLVSCISDALDHYTVAVEMLREEERRSGGAPGDALWLAAALEGFVFCLNSEAQDKFSTELVEKASEAVALYAKAGTVELE--------SLLIENLGWYYAAVAMATLRRASTSGEAKVLESLWTKRL--------LWD----VLERGLMLFPELQPQRQVEFLIQTSRMLETVGHRRRVALFLHEAASL 470
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A3M6VCA2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCA2_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.760e-25 Identity = 131/498 (26.31%), Postives = 216/498 (43.37%), Query Frame = 1
Query: 103 RSAQVL--LVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWS-EGCFNFHFIDQ----DTTDGGLSDWEDYQAYRRVLGAIGVVHFPSC--EGG----HADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGG-STTELHMAVSLYDVAVSIIKNLAADIKTWRS----SASPPSAAGRAVAVLRGNNDAAPPLTSWYEREE------------------------------------------VLSDSKNAKRR--VGRLHKWIGDTCLLLGSPKDALEHYSQSMSETK--------ASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSV-PDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAML 1383
R AQ L LVP+G+IP +++A Y +L+ ++T+P+++LT PG + + + +W+ G +FHFI +T +G ED A RV+GA+GV H PS GG HA+FK + N ++ +H ++FAF H+FE + ++FP E G G ST LH+ V + +AV+I+ +L + I++ S + S SA G +A + + + P T+ ++ + SD +N + R K +GD +L+ A+ HY+ ++ + AS D LW A LEGY CL S D+ L L + A + A + ++L E + S + A+A +R G T R W+ L R +++ P++ Q++ IE + E +G +R+AALF H +A L
Sbjct: 9 RPAQFLVYLVPIGDIPLDLFASYVRLLKTYNTLPLRSLTRPGGYAAELSPFQDLDWTGPGAIHFHFISTAERIETFNG-----EDVHASHRVIGALGVCHSPSLLLSGGLRAAHAEFKASVRHLNGLL-----LH--KLFAFEHAFEDITAKECKGLDDLVMFPVHHELPGTGESTVSLHLQVVMETLAVNIVMSLESAIRSATSIKALNGSTLSAVGGDLASVLLDVNVEPRPTNGVQQSQFSPLVLSRDARVDATTGSALSPTTHTSGSSISTIPSPLANGVAASDRRNRXXXXXLARREKLLGDYNVLVCCISGAMNHYTVAVEMLREEERRSGGASADALWLAAALEGYVFCLYTESQ--------DKFLTELVEKASEAVAFYAKAGTTELESLLIENLGSYYARVAMATLARTSMTGEANFLESIWTKRL--------LWD----VLERGMTMFPELHPQRQVQFLIETSRALETVGHRRRAALFLHEAASL 474
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A176VZU1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZU1_MARPO) HSP 1 Score: 120 bits (300), Expect = 6.110e-25 Identity = 122/433 (28.18%), Postives = 179/433 (41.34%), Query Frame = 1
Query: 91 LDSHRSAQVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGL--SDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAML 1383
++S R +V +V +GNIP Y ++ R + ++ Q +W G F F+ GG S WED+QA R+ LG IG++H P+ D F + Y R FA + Q + D Q ++FPP+++ E H+ + D A S++ ++W A P A+L D+ L S EEV SK KRR+GR+ K IGD CLL GSP DA HYS ++ + + D LWHAG +EG + AL + R KD +LE V + E + ++ R L S E+E K ARF + + E L + S M +L ++E A I +G +RKAA +A A L
Sbjct: 7 IESARMIRVAVVAVGNIPSAQLRDYVALVLRHRVVSLECARLFYK-EHQKSPFAQQSWDTGSLCFKFL-----VGGAPRSPWEDFQANRKCLGVIGLMHCPTTP----DIGAAYDHFMAICRAYPSAQEKRCFALYPTDGQVEL-DEKKRQHLVMFPPDRQM------LEYHLQTLMQDFAASLLMAF----ESWVLHAEP------VGAILTTPLDSQASLNS----EEV---SKAKKRRLGRVQKTIGDYCLLAGSPVDANAHYSTAIDLARLTGDLLWHAGAIEGSVS-----------------ALVVDRGGLKDPQLEEE---------------VRYRYLEVIQLYHRKTAL-SFELEATLKLARFLCRKELAGQVVELLMGAVEG-SKTLMDASDRLVLNVEVARIFGALGYERKAAFYARQVAQL 371
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A061S328_9CHLO (Trafficking protein particle complex subunit 9-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S328_9CHLO) HSP 1 Score: 115 bits (289), Expect = 1.530e-23 Identity = 123/465 (26.45%), Postives = 195/465 (41.94%), Query Frame = 1
Query: 112 QVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTD--GGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDA---APPLTSWYE-REEVLSDSKNAK-RRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAAC--LSAMSDADHPTVHG------DQALALLRDMA------------KDKELERAGQEGSSTWTVLAE----AVVSEKCQEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHV--QLERSIEAAVICEGMGLKRKAALFAHLSAMLCSDFETWN 1407
+V L+P+G++P V+ KY ++L + S + + ++ + +Q W G F +I + S A +VLG IG+ H PS H ++ +F Q+ + R FAF S + + D I+FPP+ E E H+ V + D A ++ L + W +ASP A+ + DA + P+++ E ++ + SD + +K RR GRL K +GD CLL GSP +A+EHY ++ ++ D +W LEG A L A ++A G D A R + + G+ G + V+ E +SE EA A + R P L EL K AR A A P R + + + A+ + QL ++EAA +C + RK AL + L E N
Sbjct: 19 RVALLPVGDVPDQVWDKYVDLLMKRSKMEL-SVVSSFYLEKQKSPFTQLRWGTGSMYFKYIKGPAGELPAPASHRACLSASHKVLGVIGICHCPS----HEQIRQAYSEFEQMCRQFPDAFTVRCFAFEPSDQPAEQEDKSAAYL-IMFPPDDE-----EKLEYHVDVMMSDFAACLLMEL----EKWMLNASP------AMVGMNTWLDAPEFSVPVSALEEVQKRLTSDEETSKKRRHGRLRKAMGDHCLLAGSPGNAMEHYGTAIDLSRTVNDFVWLGAALEGLACAKLLHAAAEAAASEATGAQQRPADPAAGTARTETAAGGAQPAGTTPRQRSPSGDGRAGEKRFQVVNEPSMMGEISELISEAQAAY-RKPRTFFLLSELVLKHARILAEADPVRRRLDVMDLVNEAIDGARLLSSAEDQLAATMEAADVCRAVRAGRKRALLLQRAIELSRSTEWRN 461
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Match: A0A8J9SL70_9CHLO (Probable trafficking protein particle complex subunit 9 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SL70_9CHLO) HSP 1 Score: 110 bits (274), Expect = 1.190e-21 Identity = 134/499 (26.85%), Postives = 189/499 (37.88%), Query Frame = 1
Query: 55 TMPPTRVWVKQGLDSHRSAQVLLVPLGNIPPNVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSF-----EQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWY------EREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAA------CLSA------------MSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCQEAL-----AVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEA--LAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAMLCSDFETWNTAHL-LARMAGE 1440
T P + L S QV++VP+G+IPP A+YC ++ R + +Q L + +Q F W G +F F+ ++ S YR+VLG IG+ H P+ AD +QF Y R F F S ++ D P ++ +FPP + GG H V + D A S++ L + T AG A+ L D + L S +R + KRR R+ K +GD LL GSP DA EHY ++ + +D WH L G A+ C+ + + A HP V QA D +G G W L + V E AL AV R L L VE ARF + T E L + + L +L +EAA + +G RK L + E N A L +AR A E
Sbjct: 5 TTPSRLLEAGTSLFSPAEIQVVVVPVGDIPPETLAQYCRLVTRHRQVELQLLRSFYK-EQQKSPFMFFPWKNGFMHFRFLTEEAA-AQKSALTPLHTYRKVLGIIGICHGPAM----ADIGTAYRQFEARCRTYSDAITQRCFFFEPSDAVVKEDKSDKPHLM------MFPPTES--GGLDQLASHAEVVMLDFAASMLAELERFMLT----------AGPAMIDLNTFCDTSDKLMSSVSVVEEVQRRLYTDEEMMRKRRYCRVQKAMGDVSLLAGSPADAAEHYLTAVDLARTCSDTAWHGAALAGLASAKIVESCIKSGAMRSVTSSSGMEAQARHPAVARVQA----EDAGSAXXXXXSGFGGPEFWASLRQVVGLEAEARALLADARAVLKRRSVL-PLMVEQDLAWARFIIGLRGTKARREVSDLISGVVELGAGLQFTEDKLTNIMEAAQVMGMVGSLRKRVLLLWQAVEFSRSSERPNVATLQIARKALE 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1631.4572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1631.4572.1 >prot_Ecto-sp13_S_contig1631.4572.1 ID=prot_Ecto-sp13_S_contig1631.4572.1|Name=mRNA_Ecto-sp13_S_contig1631.4572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=502bp KGRWSSTQQQLKACTLTSTMPPTRVWVKQGLDSHRSAQVLLVPLGNIPPNback to top mRNA from alignment at Ecto-sp13_S_contig1631:7053..13383- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1631.4572.1 ID=mRNA_Ecto-sp13_S_contig1631.4572.1|Name=mRNA_Ecto-sp13_S_contig1631.4572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6331bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1631:7053..13383- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1631:7053..13383- >mRNA_Ecto-sp13_S_contig1631.4572.1 ID=mRNA_Ecto-sp13_S_contig1631.4572.1|Name=mRNA_Ecto-sp13_S_contig1631.4572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1631:7053..13383- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |