prot_Ecto-sp13_S_contig1631.4571.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1631.4571.1
Unique Name	prot_Ecto-sp13_S_contig1631.4571.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	381

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1631.4571.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 490 bits (1261), Expect = 6.940e-156
Identity = 283/312 (90.71%), Postives = 286/312 (91.67%), Query Frame = 0

Query:    8 AGEGGWLVLRKHLLQWLLAVSARCGDVQASSEYFAGLAELTAALEDERGKADRYLVTLPLPPSEGVSPGGRMLPPVPLVMEALGNVATASSTAGAAPSIASARESRVSWSDRMMRRATAEHGPPPPSMQAQQTFLPSTPSTTTASITSTSGPATGNSSRDAFLGSNHVRSPTMPASPVQHRFETLASDFLQPASSXXXXXXXXXXXXTATAAGAKKSRKISLPKSIGRKIQASRSSGVVGRREASFSATAPPLLPVEGGGG---------SVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDVARVQLSG 310
            AGEGGWLVLRK+LLQWLLAVSARCGDVQASSEYFAGLAELTAALEDERGKADRYLVTLPLPPSEGVSPGGRMLPPVPLVMEALGNVATASSTAGAAPSIASARESRVSWSDRMMRRATAEHGPPPPSMQAQQTFLP TPSTT+AS TSTSGPATGNSSRDAFLGS HVRSPTMPASP+QHRFETLASDFL PASS XXXXXXXXXXX     GAKKSRKISLPKSIGRKIQASRSSGVVGRREASFSA APPLLPVE             SVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDVARVQ  G
Sbjct:  512 AGEGGWLVLRKYLLQWLLAVSARCGDVQASSEYFAGLAELTAALEDERGKADRYLVTLPLPPSEGVSPGGRMLPPVPLVMEALGNVATASSTAGAAPSIASARESRVSWSDRMMRRATAEHGPPPPSMQAQQTFLPPTPSTTSASFTSTSGPATGNSSRDAFLGSGHVRSPTMPASPIQHRFETLASDFLHPASSSXXXXXXXXXXXXX---GAKKSRKISLPKSIGRKIQASRSSGVVGRREASFSAMAPPLLPVEAAXXXXXXXXXXXSVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDVARVQGGG 820

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BLAST of mRNA_Ecto-sp13_S_contig1631.4571.1 vs. uniprot
Match: D8LGF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF7_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 5.350e-78
Identity = 184/210 (87.62%), Postives = 188/210 (89.52%), Query Frame = 0

Query:  180 MPASPVQHRFETLASDFLQPASSXXXXXXXXXXXXTATAA--GAKKSRKISLPKSIGRKIQASRSSGVVGRREASFSATAPPLLPVEGGGG----SVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDVARVQLSGIPRLESARLLHLHGGLALLPGDGAASQAXXXXXXXXXXXXXXXAL-FYNPFEEAVAGMDDE-ESDNGDGDIDS 381
            MPASP+QHRFETLASDFLQPASSXXXXXXXXXXXX       GAKKSRKISLPKSIGRKIQASRSSGV+GRREASFSAT PPLLP+E  G     SVCAVAHRAALTLEEQWETLSDMALCTSRLSPED ARVQLSGIPRLESARLLHLHGGLALLPGDGAASQAXXXXXXXXXXXXXXX   FYNPFEEAV GMDD  ES+NGDGDIDS
Sbjct:    1 MPASPIQHRFETLASDFLQPASSXXXXXXXXXXXXXXXXXXXGAKKSRKISLPKSIGRKIQASRSSGVLGRREASFSATGPPLLPIEAAGXXXXXSVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDAARVQLSGIPRLESARLLHLHGGLALLPGDGAASQAXXXXXXXXXXXXXXXXXXFYNPFEEAVGGMDDXXESENGDGDIDS 210

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1631.4571.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1631.4571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J9H9_9PHAE	6.940e-156	90.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGF7_ECTSI	5.350e-78	87.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..36 score: 0.598

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1631	contig	Ecto-sp13_S_contig1631:2589..7033 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1631.4571.1	mRNA_Ecto-sp13_S_contig1631.4571.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1631 2589..7033 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1631.4571.1 ID=prot_Ecto-sp13_S_contig1631.4571.1|Name=mRNA_Ecto-sp13_S_contig1631.4571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=381bp
TPLAGRGAGEGGWLVLRKHLLQWLLAVSARCGDVQASSEYFAGLAELTAA
LEDERGKADRYLVTLPLPPSEGVSPGGRMLPPVPLVMEALGNVATASSTA
GAAPSIASARESRVSWSDRMMRRATAEHGPPPPSMQAQQTFLPSTPSTTT
ASITSTSGPATGNSSRDAFLGSNHVRSPTMPASPVQHRFETLASDFLQPA
SSSSSSSAAMVAAGTATAAGAKKSRKISLPKSIGRKIQASRSSGVVGRRE
ASFSATAPPLLPVEGGGGSVCAVAHRAALTLEEQWETLSDMALCTSRLSP
EDVARVQLSGIPRLESARLLHLHGGLALLPGDGAASQAASASQAAAAAAA
ASSALFYNPFEEAVAGMDDEESDNGDGDIDS