prot_Ecto-sp13_S_contig16307.4570.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16307.4570.1
Unique Nameprot_Ecto-sp13_S_contig16307.4570.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length395
Homology
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: D8LGR4_ECTSI (Domain repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR4_ECTSI)

HSP 1 Score: 564 bits (1453), Expect = 1.480e-196
Identity = 367/395 (92.91%), Postives = 370/395 (93.67%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADSVDLGVNGTNTVGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALARTVVSTAAXXXXXXXXXXXXXXXTLTPVVAATSQPATSQPVSTPSPTLAAALPTPSPVAPPXPAXVVPVTAXXTPSPTAAIAVEAEEDTDRGGIAGAIDEMDTTVVVAVAAPVGAMLLLGCLVCAAKRKKR 395
            GNVRCWGDAEYGALG GDETTTGNGD TIADSVDLGVNGTNTVGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLP VPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSE ILTVGDDPDEMGDALPT+DLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGD+LPAVNLGTNRTAVALARTVVSTA XXXXXXXXXXXXXXX    VVAATSQP     VSTPSPTLAAALPTPSPVAP X  X   VT XXT SPTAAIAVEAEEDTDRGG+AGAID MD TVVVAVAAPVG MLLLGCLVCAAKRKKR
Sbjct:  162 GNVRCWGDAEYGALGGGDETTTGNGDGTIADSVDLGVNGTNTVGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPTVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEAILTVGDDPDEMGDALPTVDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDSLPAVNLGTNRTAVALARTVVSTAXXXXXXXXXXXXXXXXXXXXVVAATSQP-----VSTPSPTLAAALPTPSPVAPXXXXXXXXVTTXXTXSPTAAIAVEAEEDTDRGGVAGAIDGMDKTVVVAVAAPVGVMLLLGCLVCAAKRKKR 551          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A0K1EC39_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EC39_CHOCO)

HSP 1 Score: 190 bits (483), Expect = 3.050e-52
Identity = 101/199 (50.75%), Postives = 128/199 (64.32%), Query Frame = 0
Query:    3 VRCWGDAEYGALGAGDETTTGNGDSTIAD---SVDLGVNGTNTVGAIGGGP-CAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRA 197
            ++CWGD  YG LG GD T  GN   T+ D   +VDLGV+G  T   +G    CA+   G++KCWG   +GQ G G AD  GD PGEMG++LP V LG G LV +++ GR + CA+L+DG +KCWG  E GQLG  D    GD P EMGDALP +DLGS + AV ++    HTCALL  G +KCWG +++G LGL D  A
Sbjct:  204 LKCWGDNGYGQLGLGDVTPRGNLPGTMGDDLPAVDLGVDGAGTAVFMGAAHVCALLTRGAVKCWGANGHGQLGLGDADHRGDAPGEMGDALPDVDLGAGNLVAALALGRMHSCALLKDGSVKCWGDNERGQLGLGDTELRGDAPGEMGDALPRVDLGSGKRAVAITAGDLHTCALLDDGSLKCWGDSYWGQLGLGDREA 402          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A7C1YKS1_9ACTN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YKS1_9ACTN)

HSP 1 Score: 189 bits (480), Expect = 2.040e-50
Identity = 108/266 (40.60%), Postives = 138/266 (51.88%), Query Frame = 0
Query:    3 VRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNT-VGAIGGGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            +RCWG    G LG G  T+ G+    + D+   +DLG   T   V       CA+  DGSLKCWG  F G  GQG  ++LGD+P EMG++LP + LG G     + GG  + CA+L +G +KCWG    GQLG      +GD+P EMGD LP+IDLG+  TAV ++  S HTCA+L  G +KCWG      LGL D                                        +  RG   G+MGDNLPAVNLGT RTAVA++
Sbjct:   61 LRCWGQGTNGQLGQGSTTSIGDNPGEMGDNLPAIDLGTGHTAARVATTYSRTCAILDDGSLKCWGNNFGGSLGQGNTNNLGDQPNEMGDNLPSIDLGTGRTAVMVVGGLSHVCALLDNGTVKCWGHNTAGQLGQGHTNDIGDNPGEMGDNLPSIDLGTGRTAVAIAAGSHHTCAILDDGSLKCWGANTSAQLGLGD----------------------------------------AQNRGDQPGEMGDNLPAVNLGTGRTAVAVS 286          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A4U1JAV6_9DELT (Uncharacterized protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JAV6_9DELT)

HSP 1 Score: 187 bits (474), Expect = 4.230e-50
Identity = 113/268 (42.16%), Postives = 139/268 (51.87%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNTVGAIGGGP-CAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            G V+CWG+   G LG G   + G+    + D+   VDLG   T    A G    CA+  DG +KCWG G YG  G G     GDEPGEMG++LP V LG G +V +ISGG+ + CA+L DG +KCWG    GQLG+ D  T GDDP EMGDALP IDLG+   A+ ++    HTCALL  G VKCWG    G+ G  D                                        S  RG   G+MGD LPAV+LG   TA+A+A
Sbjct:  244 GRVKCWGNNSNGVLGLGHSKSVGDEPGDMGDALPFVDLGTGATAVSIAAGVSHICALLADGRVKCWGYGTYGALGLGDMKDRGDEPGEMGDALPAVDLGAGAVVRAISGGQYHSCALLADGRVKCWGHGFSGQLGTGDKETRGDDPGEMGDALPAIDLGTGAKALAIAAWGQHTCALLHEGRVKCWGNGINGSTGQGD----------------------------------------SLSRGDEPGEMGDVLPAVDLGVGVTAIAIA 471          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN)

HSP 1 Score: 186 bits (472), Expect = 3.200e-49
Identity = 110/268 (41.04%), Postives = 138/268 (51.49%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIAD---SVDLGVNGTNTVGAIGGG-PCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            G V+CWG+   G LG G   T G+  +   D   +VDLG   T T  A G    CA+  DG++KCWG    GQ GQG  D +GD PGEMG++LP V LG G    +IS G  + CA+L DG +KCWG    G+LG  D+   GD   EMGD LP ++LG+  TA  VS  ++HTCALL  G VKCWG  F G LG  D                                            G + G+MGDNLP V+LG+ RTA+A+A
Sbjct:  128 GTVKCWGNGGSGRLGQGSTDTIGDSTAERGDGLPTVDLGTGRTATAIAAGQQYTCALLDDGTVKCWGNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLGTGRTATAISAGSSHTCALLDDGTVKCWGSGSFGRLGYGDLTKRGDGAGEMGDNLPPLELGTGRTATAVSAGNTHTCALLDDGTVKCWGGGFNGQLGTGDVTG----------------------------------------LGDNPGEMGDNLPPVDLGSGRTAIAIA 355          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A150G0E4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G0E4_GONPE)

HSP 1 Score: 177 bits (450), Expect = 3.640e-49
Identity = 109/268 (40.67%), Postives = 137/268 (51.12%), Query Frame = 0
Query:    3 VRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNTVGAIGGG---PCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            V+CWG A  G LG GD    G+    + D+   VDLG   T  V  + GG    CAV  +G  KCWG     Q G G  ++ GD PGEMG+SLP V LG G    +++GG  + CAVL +G  KCWG +  GQLG  D    GD+P EMGD+LP +DLG+  TAV ++  + H+CA+L +   KCWG  +FG LG  D                                           RG   G+MGDNLP V+LGT RTAVALA
Sbjct:   50 VKCWGRAANGQLGYGDTNNRGDNPGEMGDNLPFVDLGTGRTAVV--LAGGHYHTCAVLDNGRAKCWGWNNAAQLGYGDTNNRGDNPGEMGDSLPFVDLGTGRTAVAMAGGELHTCAVLDNGRAKCWGVSSLGQLGYGDTSIRGDNPGEMGDSLPYVDLGTGRTAVVITAGTYHSCAVLDNARAKCWGPYYFGQLGYGDLNT----------------------------------------RGDGPGEMGDNLPYVDLGTGRTAVALA 275          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 180 bits (456), Expect = 2.400e-48
Identity = 107/267 (40.07%), Postives = 137/267 (51.31%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNTVGAIGG-GPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVAL 263
            G+V+CWG   YG LG GD +  G+G   + D+   + LG   T    ++GG   CA+  +GS+KCWG   YGQ G G   S GD PGEMG++LP + LG G   ++IS G  + CA+L +G +KCWG    GQLG  D     D P EMGD LP + LG+  TA  +S    HTCALL +G VKCWG    G LGL D                                        +  RG   G+MGD LPA+ LGT RTA+A+
Sbjct:  181 GSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGD----------------------------------------TSYRGNGPGEMGDTLPAITLGTGRTAMAI 407          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A0K1ECX1_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1ECX1_CHOCO)

HSP 1 Score: 176 bits (446), Expect = 4.890e-47
Identity = 109/276 (39.49%), Postives = 133/276 (48.19%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADSVDLGVNGTNTVG-AIGGGP---CAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALARTVVSTAA 272
            G V+CWGD   G LG GD  T G G   +   +     GT +   A+  G    CA+   GS+KCWG   YGQ G G   + G++PGEMG++LP V LG G    +I  G  + CA+L DGG+KCWG  + GQLG  D+   GDD  EMGD LP +D               HTCALLG GGVKCWG    G LGL D  A                                        RG  AG+MGD+LPAV+LG  + AVA+A     T A
Sbjct:   63 GRVKCWGDNWVGQLGIGDTRTRGEGPGQMGTRLPAAELGTGSAAVAVAAGAWHSCALLHGGSVKCWGFNEYGQLGVGDYRNRGNDPGEMGDALPAVDLGAGKTATAIVAGAWHSCALLHDGGVKCWGDNQSGQLGLGDVEARGDDAGEMGDGLPAVDXXXXXXXXXXXXXXXHTCALLGDGGVKCWGDNRSGRLGLGDVEA----------------------------------------RGDDAGEMGDSLPAVDLGAGQAAVAIAAGEAHTCA 298          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: L7UHS0_MYXSD (RCC1 repeat-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) TaxID=1278073 RepID=L7UHS0_MYXSD)

HSP 1 Score: 173 bits (439), Expect = 6.980e-47
Identity = 106/268 (39.55%), Postives = 136/268 (50.75%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNTVGAIG-GGPCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            G V+CWG    G LG GD    G G   + D+   VDLGV       A G    CA+ +DG++KCWG    GQ G G   + GD  G MG++LP V LG     ++I+ GR + CA+L DG +KCWG  E GQLG  D  + G +PDEMGDALP + LG   TA  ++  + HTCA+L  G VKCWG   +G LGL D                                           RG + G+MGD LP+V+LGT RTA A++
Sbjct:   33 GVVKCWGRNTEGQLGLGDTVNRGAGPREMDDALAFVDLGVGRVAKALATGYEHACAILEDGAVKCWGYNMNGQLGLGVRSNHGDSQGSMGDALPTVNLGTKRTAKAITAGRAHSCAILDDGAVKCWGGNEYGQLGLGDKASRGVEPDEMGDALPEVKLGVGRTATAIAAGNLHTCAILDDGAVKCWGDNGYGRLGLGD----------------------------------------KSGRGDAPGEMGDALPSVDLGTGRTAKAIS 260          
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Match: A0A840I6P4_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein/outer membrane protein OmpA-like peptidoglycan-associated protein n=1 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840I6P4_9ACTN)

HSP 1 Score: 181 bits (460), Expect = 1.230e-46
Identity = 109/268 (40.67%), Postives = 137/268 (51.12%), Query Frame = 0
Query:    1 GNVRCWGDAEYGALGAGDETTTGNGDSTIADS---VDLGVNGTNTVGAIGGG-PCAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLVESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALPTIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPRGVSAGQMGDNLPAVNLGTNRTAVALA 264
            G V+CWG    G LG GD    G+    + D+   VDLG   T T  A G    CA+  DGS+KCWG    GQ GQG   + G +PGE+G++LP V LG G    +I+ G  + CA+L DG +KCWG    GQLG  D    GD P E+GDALP +DLGS  TAV VS    H+CALL  G ++CWG    G LGL D                                        ++PRG   G++GD LP V+LG+ RTA A+A
Sbjct:  537 GTVKCWGANNGGRLGLGDTAARGDAPGEMGDALPPVDLGSGRTATAIAAGSSHACALLDDGSVKCWGANASGQLGQGDRAARGGQPGELGDALPPVDLGSGATATAIATGSHHSCALLADGTVKCWGDNGSGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTAVAVSAGRDHSCALLDDGTIRCWGGNSDGQLGLGD----------------------------------------TEPRGDQPGELGDALPPVDLGSRRTATAIA 764          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16307.4570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGR4_ECTSI1.480e-19692.91Domain repeat protein n=2 Tax=Ectocarpus TaxID=287... [more]
A0A0K1EC39_CHOCO3.050e-5250.75Uncharacterized protein n=1 Tax=Chondromyces croca... [more]
A0A7C1YKS1_9ACTN2.040e-5040.60Fibronectin type-III domain-containing protein (Fr... [more]
A0A4U1JAV6_9DELT4.230e-5042.16Uncharacterized protein n=1 Tax=Polyangium fumosum... [more]
A0A7C1YRK2_9ACTN3.200e-4941.04Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A150G0E4_GONPE3.640e-4940.67Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A835T669_9CHLO2.400e-4840.07Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A0K1ECX1_CHOCO4.890e-4739.49Uncharacterized protein n=1 Tax=Chondromyces croca... [more]
L7UHS0_MYXSD6.980e-4739.55RCC1 repeat-containing protein n=1 Tax=Myxococcus ... [more]
A0A840I6P4_9ACTN1.230e-4640.67Alpha-tubulin suppressor-like RCC1 family protein/... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 156..276
e-value: 2.6E-15
score: 58.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..140
e-value: 4.0E-15
score: 57.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..237
NoneNo IPR availablePANTHERPTHR45982FAMILY NOT NAMEDcoord: 1..185
coord: 158..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..390
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 391..395
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..368
NoneNo IPR availableTMHMMTMhelixcoord: 368..390
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 117..176
score: 8.755
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 217..265
score: 9.017

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16307contigEcto-sp13_S_contig16307:1..3828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16307.4570.1mRNA_Ecto-sp13_S_contig16307.4570.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16307 1..3828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16307.4570.1 ID=prot_Ecto-sp13_S_contig16307.4570.1|Name=mRNA_Ecto-sp13_S_contig16307.4570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=395bp
GNVRCWGDAEYGALGAGDETTTGNGDSTIADSVDLGVNGTNTVGAIGGGP
CAVFQDGSLKCWGEGFYGQNGQGTADSLGDEPGEMGESLPIVPLGEGVLV
ESISGGRDYQCAVLQDGGLKCWGRAEGGQLGSEDILTVGDDPDEMGDALP
TIDLGSAETAVEVSTASSHTCALLGSGGVKCWGKAFFGNLGLEDFRANVA
LSVAAAGQRTCAILEGGSLKCWGGNSGGQLGLEDSDPRGVSAGQMGDNLP
AVNLGTNRTAVALARTVVSTAAAATAAPTPAPTAAPTTLTPVVAATSQPA
TSQPVSTPSPTLAAALPTPSPVAPPTPAPVVPVTAPPTPSPTAAIAVEAE
EDTDRGGIAGAIDEMDTTVVVAVAAPVGAMLLLGCLVCAAKRKKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens