prot_Ecto-sp13_S_contig16303.4569.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig16303.4569.1
Unique Name	prot_Ecto-sp13_S_contig16303.4569.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	139

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16303.4569.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.050e-76
Identity = 132/139 (94.96%), Postives = 134/139 (96.40%), Query Frame = 0

Query:    1 ERKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGASLPAITEEEIVAAEKKCRMEEGGADMLDRPPESFREAVLPEHLRYKAQFEYKAGIMSKGIAALIISASDPDLKEAASPVLHGIILDCIRLTTPPPPTPQAAE 139
            ERKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGG SLPAITEEEIVAAEKKCRMEEGGADMLDRPPESFREAVLP HLRYKAQFEYKA +MSKGIAALI+SASDPDLKEAASPVLHGIILDCIR TTPPPP PQAAE
Sbjct:   82 ERKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGVSLPAITEEEIVAAEKKCRMEEGGADMLDRPPESFREAVLPAHLRYKAQFEYKARMMSKGIAALIVSASDPDLKEAASPVLHGIILDCIRFTTPPPPAPQAAE 220

[Close]

BLAST of mRNA_Ecto-sp13_S_contig16303.4569.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.200e-70
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0

Query:    1 ERKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGASLPAITEEEIVAAEKKCRMEEGGADMLDRPPESFREAVLPEHLRYKAQFEYKAGIMSKGIAALIISASDPDLKEAASPVLHGIILDCIRLTTP 130
            +RKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGASLPAITEEEIVAAEKKCRMEEGGADML RPPESFREAVLPEHLRYKAQFEYKA +MSKGIAAL++SASDPDLKE ASPVLHGIILDCIRLTTP
Sbjct: 1151 QRKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGASLPAITEEEIVAAEKKCRMEEGGADMLGRPPESFREAVLPEHLRYKAQFEYKARMMSKGIAALLVSASDPDLKETASPVLHGIILDCIRLTTP 1280

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig16303.4569.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig16303.4569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KAF7_9PHAE	1.050e-76	94.96	FAT domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LFI6_ECTSI	1.200e-70	94.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..42
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 43..139
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig16303	contig	Ecto-sp13_S_contig16303:1210..2109 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig16303.4569.1	mRNA_Ecto-sp13_S_contig16303.4569.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig16303 1210..2111 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig16303.4569.1 ID=prot_Ecto-sp13_S_contig16303.4569.1|Name=mRNA_Ecto-sp13_S_contig16303.4569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
ERKSVIRDTLQESLSRHKRLAFRLVLSCMAPVLAGGASLPAITEEEIVAA
EKKCRMEEGGADMLDRPPESFREAVLPEHLRYKAQFEYKAGIMSKGIAAL
IISASDPDLKEAASPVLHGIILDCIRLTTPPPPTPQAAE