prot_Ecto-sp13_S_contig16287.4554.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16287.4554.1
Unique Nameprot_Ecto-sp13_S_contig16287.4554.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.840e-36
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 GVRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVFDSAVGEVIEARRVRAA 77
            GVRAGAVELIVRVA+ALGALDTQVFL PVLRPHLRYSLPGGSLDEA LLDALRPPVPRPVFDSAVGEVIEARRVRAA
Sbjct:  482 GVRAGAVELIVRVAEALGALDTQVFLYPVLRPHLRYSLPGGSLDEAALLDALRPPVPRPVFDSAVGEVIEARRVRAA 558          
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Match: A0A6H5JSX2_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX2_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.000e-35
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0
Query:    2 VRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVFDSAVGEVIEARRVRA 76
            VRAGAVELIVRVA+ALGALDTQVFL PVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVFDSAVGEVIE RRVRA
Sbjct:  690 VRAGAVELIVRVAEALGALDTQVFLYPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVFDSAVGEVIETRRVRA 764          
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Match: UPI00125E4EDB (serine/threonine-protein kinase VPS15 isoform X1 n=6 Tax=Ipomoea TaxID=4119 RepID=UPI00125E4EDB)

HSP 1 Score: 52.4 bits (124), Expect = 5.170e-5
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    2 VRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVF 61
            VR  AV  I   +++LGA+D+ VFL PV+RP LR   P     E TL   L+PPVPR ++
Sbjct:  800 VRRSAVAFIAASSESLGAVDSYVFLVPVIRPFLRRQ-PASLASEKTLFSCLKPPVPREIY 858          
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Match: A0A7C9DL06_OPUST (Non-specific serine/threonine protein kinase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DL06_OPUST)

HSP 1 Score: 51.6 bits (122), Expect = 9.100e-5
Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    2 VRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVFDSAV 65
            VR  AV  I   +++LGA+D+ VFL PV+RP LR   P     E  LL  L+PPV R VF  A+
Sbjct:   89 VRRSAVSFIAASSESLGAVDSYVFLAPVVRPFLRRQ-PASLASEKALLSCLKPPVSRQVFYQAL 151          
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Match: A0A2P6SBM7_ROSCH (Non-specific serine/threonine protein kinase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6SBM7_ROSCH)

HSP 1 Score: 51.6 bits (122), Expect = 9.560e-5
Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    2 VRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLDALRPPVPRPVF 61
            VR  AV  I   +D LGA+D+ VFL PV+RP LR   P     E  LL  L+PPV R VF
Sbjct:  804 VRRSAVSFIAASSDCLGAVDSYVFLAPVIRPLLRRQ-PASLASEKALLSCLKPPVSRQVF 862          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16287.4554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LRQ5_ECTSI1.840e-3696.10Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5JSX2_9PHAE3.000e-3596.00Non-specific serine/threonine protein kinase n=1 T... [more]
UPI00125E4EDB5.170e-546.67serine/threonine-protein kinase VPS15 isoform X1 n... [more]
A0A7C9DL06_OPUST9.100e-546.88Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2P6SBM7_ROSCH9.560e-550.00Non-specific serine/threonine protein kinase n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16287contigEcto-sp13_S_contig16287:2720..3900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16287.4554.1mRNA_Ecto-sp13_S_contig16287.4554.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16287 2719..3900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16287.4554.1 ID=prot_Ecto-sp13_S_contig16287.4554.1|Name=mRNA_Ecto-sp13_S_contig16287.4554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
GVRAGAVELIVRVADALGALDTQVFLNPVLRPHLRYSLPGGSLDEATLLD
ALRPPVPRPVFDSAVGEVIEARRVRAAGGGGGGGAGAEDGGQPLQQFPAR
DNNAAAAGDYQRQAADSRGGGNGGPDHSQTSQQQQQQQQQQRRNLSG
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