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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 344 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 342 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462857.2932777-CDS-Ecto-sp13_S_contig1628:4564..4686 | 1681462857.2932777-CDS-Ecto-sp13_S_contig1628:4564..4686 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1628 4565..4686 + |
| 1681462857.3031697-CDS-Ecto-sp13_S_contig1628:5052..5169 | 1681462857.3031697-CDS-Ecto-sp13_S_contig1628:5052..5169 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1628 5053..5169 + |
| 1681462857.3123615-CDS-Ecto-sp13_S_contig1628:13374..13414 | 1681462857.3123615-CDS-Ecto-sp13_S_contig1628:13374..13414 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1628 13375..13414 + |
| 1681462857.3210886-CDS-Ecto-sp13_S_contig1628:13611..13674 | 1681462857.3210886-CDS-Ecto-sp13_S_contig1628:13611..13674 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1628 13612..13674 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1628.4550.1 >prot_Ecto-sp13_S_contig1628.4550.1 ID=prot_Ecto-sp13_S_contig1628.4550.1|Name=mRNA_Ecto-sp13_S_contig1628.4550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
GTVAHAPVPTACSVLQRITSGRSRTSVRCPPTEYIGLSPCCSLRTIGSDK
ARAVVEATGAAKAETAALESCIDPPVVRDRTTLSATTEVTRIQARCLLLV
WNSRLVIGLWQPR* back to topmRNA from alignment at Ecto-sp13_S_contig1628:4565..13674+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1628.4550.1 ID=mRNA_Ecto-sp13_S_contig1628.4550.1|Name=mRNA_Ecto-sp13_S_contig1628.4550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9110bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1628:4565..13674+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCACCGTCGCTCACGCCCCCGTACCTACTGCATGCAGCGTGCTTCAGCG
GATAACCTCCGGCAGATCGAGGACGAGCGTTCGGTGTCCCCCCACTGAAT
ACATTGGTCTTTCCCCTTGTTGGTGAGTAGTACTCCTTGGCAAATGCTCA
CAAGTTGCTGGCGACATTGCGTTTCAAAGTGCAGCTGTCTAGAGTAGTAG
TGCCTCACTGCTGTGGCGCGTGGGTTGTTGGGTGGCAAGAGGAACCCTGA
TGCCTGTGCGGCCGAACTGCACTGTACAACTGGCAACAGACATCAGTGTG
GAACTAAACATGGCTAAGGCCCAAACATTCTCTTAGTGTTAGAGTAGTTG
ACTACATGTAGTTGGACACTGTGTTCATGACCTTTTGCTGCATCACTGCC
CTTCACCTGGGAAACACAGCAAATGGTACTGAACGAAATCTTAGGCGCGC
GCTTTCACCGACTCTTGTAAAATTCCCCTAACCCGCAGCAGCCTCCGGAC
AATCGGCAGCGACAAGGCAAGGGCGGTAGTCGAGGCAACAGGGGCGGCCA
AAGCTGAAACAGCAGCCTTGGAATCATGTATTGACCCGCCGGTCGTGAGG
GACAGGTGTGTCCTTGACTGACGCTTGGTGTGCAACAGTAACTACGTATG
TACCTCGGCTGCTGCTCTTTCTTCTAAACTGTTTAACCTCGAGATTAGGC
CGCTAACGACCAGCAAGACACGGCGCAAGGCGGTTTCTTACGCATGGTGC
TCTCTGGCTTTTGGTTGGGGGGGGTCCTTTTCTTAGCCCAAAGGATTATT
TGGGCTGCTTACGAGGAGGAAATGGCAAATTATCACAGCCCAGCCCAAAT
TATCTCAGCCCGAATATTTCCAAGGATTCCGGCCTCCCTGTTAATTAATT
GGTCCATTTTCTAACAGCGACATTGCTCTGCTAAGGTTCTTGCCTTTCGC
CCGAAAAAGGCAGTTTTTTGCGCCTGCTGCATGTGTGACCAGTTGAAAGC
GCACGTCAGAGAGAGGCTTCAGGCCGTCGACATCCACGAACTGCAGCCAA
TGGCTTGTGGTCATTCACGTACCCTCTGCTCGCGTCCCAAAAACAGAGCG
TATTGTCCAGTTTTGAGTGCACACGGGCTGCAAATGTGAACAGAACTGTG
TTTCGGTGTTGATTTTGTGGACTTTTTTCTTTTTCCGCCGCGAGTGTGCT
CCGTGTGTCACCCACCACCAGTCCAAAACGCATGCCAGAGAGAAGCTTTA
GGCCGATGACATCCACAAACTGTAGCCAATGGCGTGTGGTCGTGCACATA
CCCTCTGCTCGCGTCCCAGAAACGGAGCGCATTGTCCAATTTTGATTGCA
CACTGCCTACAAACGCGAACCGAACTGTGTGTTTCGGTGATGACTTTTTG
GACGTTGCTTTATTTTCAGATGTAACTTTTGGAAGTGCTGGGTGCAGGTG
GATAGTTGGCGCTTCATACGTCGCAACAACTGTCTACAGACCATACTCTA
TGAATCACTCGGTTGCGATTTTTTATCCGCGCCCGGGAATACCGAGAGCA
AGTGTGTTTTTACTGGATTTTACAAGGATTTCGCCAATTGCTCGTTTTCT
CTCCCTTGAGCTAAAAAACCTGAACCGAGTGATCTCTTCCTTTGGGTTTT
GTGTACACACCGGACGAAACCGCATCCCGATCCAAGCTGTTGCGGTCGGG
AGATTGCAAAAGCCGTATCGGAACTCTTGGACAGCTTTTGACTTGATGAA
CAGCATGCCAACACAACATAACCAAAAGTTCGTTGCGTGCTTGAACAAAA
AAGAATAAGAAATTTTTAACTTCAGAGAGACGCACACAACGCACACAGCA
GCCGCGCCTGTCCGATATCATACAAGCACTGTCCACCAGCACAGTTCGCA
CACGCACACACGGCGTTGAATCCGAGTGCCGCCCCGATTTCCTGGCAGGA
AGAACAGCAGTGGAAACACATCGCAATAAACGGGTGTGCATACAGCAGCA
GCAAAGTCGGAACATCATCCTAACCTCAACACTCAAAGAACTGGTTTACG
TCGCACTACTTGAAGAGAGAGTAGGTGCCGATTTTTTTTCATTGTTTTTT
TCATGCGCACGCCCGCACACCTTTGTTGTTTTGTGTGAGACTCCATGCGA
CGACCTTGGGCTGCCCCCAACCGCCAGGACGGTTGACCAACCGAACATCT
ACTCTCACACTTGAGCATTGGTCGTTACCGGATGAGTGTGGTGAGGGATT
GTAGACAAACATACGGTCTCTTGAGCAGCGCACGGCTTACGGACACAGAG
CCGCAACCCCACAGTTACTTGCAGCCGCTGTACGGCACACACATCGTTTG
TGGCGTGGGAAACCGGCAGATCACTGTGGACCTTAGCTCAAGCACGTCTT
ACACGTGTATCGGTTCGGGCGTAAGGTCGCGCGTTGGCGAGTTCACGAGT
ATGACGCTTGGTCACTACGTGGGACATGGATGATATCTGCGTGTGCACAC
CAGCACCGCAGCACAGGAGGAGCACCGGGCAGCACAGAGAACTGCTGTTG
TCTCCGCAATGTAAACAGCAGCCAAACCCTCAACACAGCTTGTATGTATG
GGTTCTGCGTGCGGTCACCCCACGATTCCAGGATGTCGTTAACCCAGCCA
TACAACGCGTATGGAGGCCGTCAAGCCGTGAAGAAGCTCGCACATCATCT
GCAACACTGCTGCTGTAGCGGAGAGAACTTGCCTTTCCCTGCTATGTGTC
AACAGCAGCACGACACCGACCGTGGTGATCACGCAATACGCCGTACCCCG
CCTTTTCGCTCCAACGCGAAATGCCAACAACAGCCACATTTTGCATTGGT
CAACTTCCTTCGACGCACGCCACACCCAATATCACGTACGTTTACTCTCA
GCCGGGTGTGCTGTGCGCAAGCCGCTTGCTTAGCGGAGCCGCACAGATTT
TTCAAGAATATGCTTCACACGGAACCGCAATTGTGGTGTAACTTGTCTAC
ACCTTACGAACGATATAGCGAAGATCTTGTTCTCGACGGCAAGCCACACA
TTCTTCTGTTCAAGCTCGAGACAGTCAGAGAACTGCACATTGTGGGTACC
ACGTATCACCAGGGCGTTAGTGCCAAGCGAACCCAGTTGCCTTGAAGGTT
TGTGCTCGGTATGACTGCTATTGTTTACCGTGTCCAAGACGGTAAACGTT
GAACCGTACTTAAGTCGATTTGACGTTGAATCCCTTTTTACTCTACGAGG
CCATTTGTATTGCTGAACTCGTGGGTACGAAAGTAAGTCTCGCGACATGG
TTGCTTTAACTACGAAACATTGGTAGGTTGTTTTGGGAAGGCCGAGGCGC
ATACATGACGCCTTTCGCCCGCCTCAGTGCGGGGGGTCTCCACTTGACGA
ACATTTTATCATGCACGCTTTCGTCCCACTCGTAGACATGGAACACAGTC
AACTTTGCCCAGCCCTGCATCCTCAATGCCGCCGTTTGAGTGCTTTTTAC
TTTGTCATTCGGGCTTCGATGGGCGGGGGAGCCCTTCCATAAACTACGTA
GACGCATAGTGTTGGGGTTGAACTTGAGAAGAGGCACCAAAGCGTTTTCT
TGCAAACAGACGTCAAGACGTCCGCTCCATGTCGCATTGTGATTGACTCT
AGTTTTCTCTCGTTTTGGGTCGTTTTGGGTCGTTTTGGGTCGAGTTGTAC
CCATTGGGCGTCAACAGCTATGTCGTACGTACAACATCTTCCAGCCGTTG
AGCTCGTGTTGTGTTCCACATCAATCACTATGGAATCCTTGCACTCTTAT
CTTGAATCTACACCCCTTGATCAGAGTTGGAAGTCGGGTTCCAATTCTCC
CTTCTTGCTTACGTGGGTTTCGTTCGAGTTGTGTCTTTCTTCTCGAAGTT
GTATGTTGCGTTCGTGCAGACATGAGCATCGTGGAAAAGTAAGCGGGTAG
GCGCGTGGTTGCCAGCCTTTCCTGTGGTTTTGGGGCACTGCTCGGCGTCG
ATATTCCAGTCATTCTTTGCGGTGTTGCTTAGTTTCCTCTTCTGCATGTG
TTTTCGGATCCTGCAGCCTACGAGACGTTATCTGGTTCTTGCGTAAGTAC
TAGCATCTCCACGAAAAATTTCTTTCTAGGCCTTCGTCACCTCACATACA
GGTACCCGTGCGTTCTCATCACACGTTATGCTGTGCCTCGCCTGTCCACT
CTCACCGCGCATGGGAACAAATTCTCATCAGCTTTCCAACTTCGCCCTCT
TCTTTTTTATCCCCCCTTTCGCCGTCGTCGACTACTCTCGCTTGCGATTC
GGGCTCCAGCGCCCGCTGGGGGCGCGGGAGCCGTGGTCTTCCCCATATCG
TTCATAACGTGTAGACAAGTTACGAAGCGTTATGGCGCAGCCGTGTGAAC
AAAATTTTTCAAAAGATTTGCGCGGTTCTGCTGAGCAAGCGGCTTGCGCA
CAGCACACCCCGGCTGAGAGTAATCAGTCAGGCTCGCATGCATAGGTCAA
CGACGGAAAATAGCAGTAGGGAGACGCTGGCCAGTCAGGCGGATACACAC
GTCAACGCCTAGAAACACCAGTAGCAGCGGAGAGGTTCAGCTGTTTGCCC
CTCACAACTTGGTGTGTGTAAGACATCGTGCTATGCTGCGACCACTGCCT
CAACCCTAACCGATCCAACGCAACCGGAACAGGCATTAAACAAAACATCG
TCCCGGCAAGTCCGTGATGTGCGTGGGTCCACCAGAAGCGGTTGGGTCAG
ACGCATTCGTCAATGCCAGAAAACATCAGTAGTGTAGCAGAGAGGTTCCG
TTGTGTCCCGCTCACAGCTTGGTTTGTGTGTAACCATCGTGCTACACAGC
GTGTGTCTGTGCAGTTTTATCGCAAGTTGACCCACCTTTCTGTAGTCGGA
CACGACATCCTCTCGTGCACACAGGCTGCGCTACATGAACACCCGACTAC
AAACAGTTGTGCATCTTTTTGGTCATCGCGAGTGTCCTCGCGTGCGACAC
CCGAGGACTTTTCCGCGAAAATCTTTCACCTTCAGACTCTCCGCAGCCAA
TGGTTGTGCAACCTGCAAACAAGCCTATGGAAAAGGAACAGTGAGACTCC
CCCTCCAGGTGCTTCATGGCTGCAATACTCACCGACTCGATTGACTAAGA
GGTTCCGAACATCCCCACGCCCACATGCAATAGATCGGTGTCAGGCTGCA
GCGTGGGCTGTGGACCGTAGGAGCTGATTTTCGGGTCTCGCTGTCGAAAT
CAACTTTGCGATCTGGACTAAAAATGCATTACAATCGGCTTCTTTCCTCT
TGAGTCGAGAATCAAGGAATAAAATGGCAGGCTGCCACCTGTCTTCAATC
TCTGTCCGTGGCAATGCGGGTGGGGTTTGTTGGTCATTGCGCTTAATCTC
GAACCTAGTTTGCTTCTGAGACGAGCGAAGCCAACTTAACGAGTAGGACT
TTCCTTTCTCGCTTTCCCAACGGAAAATCAAGCACCAATGGACTGTATCG
TCCGTGTTGTACGTCATACAGCCGAAAAAGGCACACAACACGCCAGCGTG
GTGCAGCGCTTGCAAGTAGCTAGGCTCCCGTGTGCAGCGGCACGTGCAGC
GACGCGTGCGCGATGAGCGCATAGATCCGTGCTGCTTAGTGTGGTGAATA
ACATTCAGATCGGTTGCTGTCGGCTTGATTCACCGGAAATGCAAAGAACA
TATAAATTCATCTTTGGTTTTCTATGTGGAACAGTCAAGTGGCAAACCTC
CGACAAATGTTTAGTGGGAGCAGAAGGCAGTGGCTTTGGCCTCTTGGGTC
CCACATCATGGTAGAGCCTTGAGGGCTGTTTCCCTTACTCACTAAACTCC
GCCTGGGTGAGCTTGCTCTCACTCAGGTTAGACATATCGCGAGACATGAT
GAATCGAAACCGCGAGGATTTGAAGAAGCAGAACGAGAGCGCGCGACGGT
GAGAAATGAGAAACAACTCGTTCGAGAAACCGCGAACCTTGCGGAAATGC
GGTTCGTTGTACAGCATGGTCTCTCATCCCCGTTCTCGCCCGGGGTGGTT
GTAGGTGCACAGTGAATCGAGCGATGAAGTCAGCAAATAAGCAAACTACA
CGGCCACTGGCGGCAAACACTATCAGAGGTGGAAGCCCCGAAAGCTTTTG
CTCCACCCTTGACCTGAGAGGTCAAAGATTGCTTGGCGTGCCATCCCCTT
TGACATCCATGCTGGTGATTCGTGCGGTGTATAGGCAAACATGTCTCTTT
TTGTGTGGAAACAGAAGCGAAGACAAGCCTGGCCATGGGTCCATACGCTT
ATGCCAAGTATCAACGGTCTGTAGGTGGCCGCATGGTATAGGGCAACCTC
TGGCAGTCACCAAACCGTGGGAATTACGGCTGCAGTCGGTGATATACGCT
TCCAGATGTGGAGCGTGCTCGCTCAATTTTTAGGTGCTTGTTTGAAGGCA
ACTTGGCGATTTTTCCCTTTCATTTTCAGCGATATTTCTCACAGAGAGCC
ATCTACGTTCCACGCTTGTTGGTCCTTCAGAATACCGCTTATGGCTTGGA
ACTTTGTGTGCCAAAGGCTAGTAGGGGCAGGAAGACTTACAGACAACTGT
CAGAGCGCCGGCTGGTGTAGGCAGCAAGCTTTACGCCTGCTTGTGTGTGG
TGCGCTCTCTTCTTTGTTTCAACCTCTCGAATTGGGAAGATCCGGTCTAT
TGCTGAAGTTTAACGCAGTGGCATGCCCTGTGCCTGGTCTCTTGGCCCCA
GGATTCGGTACGAAACGGAGGTACTCTATGGGTTCGTTCTACCCTCAGCC
AGAGTCGACCTCGACAACTACTTGCTCTCCCTCACGAGTAGCTATGGCCT
CTCCTGATATATGCGTCTGCGTGGAAAAAACGCAAGTTAACGGCGGTTAA
CCTCGGTTAGCCGCGGGTTTGGCAACGTGATACTAGATAGGGCGGGGTAA
TGAGCCGGGGTAATGAGCCGCCGGGTAGCGGACCCAGTACCTTGCAGTAG
TCTTGTATCTGCGACCCTGTTTGCTTTTTGAAGGCGTGGCGGATGCAGTC
GATCATTTTGAATTTTTATTCCAAGTCAACAAAGAATATTCTACGGAAAA
AAGTGCAACGAACGGCGGTTGGGATTCGTGACACAAGGTACCACACCCTG
GACCAGTTTTCAAAGCTCGGTTGCTCCACACCACAACCAATGGTGTGGGA
ACGTCTCGTCGAGAGCTTTCCGACAACGCCTCGCTGGGTTTACGCATCCT
TTTCGTCGTGGAGCGTTTTGCTTTAAATGTTGACACAGGCGGTGATTCAA
GTATCGACACAGGGAATGTGGTATCCTATGTCACCTACGGTATACATCAC
ACATACGTGCACCTACCATTTTGATTTTTTGGTGATTTCTCTGCACAGAG
TGACGCAGCAGCAATGATAAAGCTGTCCCCGTGAGCTCTGTGTATGCTCG
TGTGTGGCTGCTAGTCCAGGCCACGGGGCCATGGGACCCGCGGAAGCAGA
GGTGGCGAGAGTCGGCAGTACATGTACGCGAGAAAAACAACCCTGGCGCA
AGACAGAATGTCTTTCTTTGTGTGTTTTTTCCCCCTTACACACGTTTGTT
TCCAGGTGACCCCTCCCCACACACCGAAGCAACAGCAATACCATTGTGTC
AGCCACGAGCTGTGTCCATGCTCCATCTTATGTGGTAATGAACACCGACC
ACGAGGCTGTAGGACGATAAGAAACTGAGAGCGCGAGAGTCTGGCACAGC
CTGAAAAACCGCCGCGTCTGCTGGGATTGGTTTGTACGTGTTTTTGTGCC
CCATTCGCAGGTTTGGTTTACCGATGATCCCTCCCCAGACAACGAAGCTC
AGCAATGACATTGACACCCGCCATGAGCTCTGTGTATGTACGTATCCCTT
CCCTCGCCAACGCTGTCTCGCCCCTCCCAGCGGTGTTGCGTGGTTAGCTC
AGTGCTTCCTCTGTTCCCTCTTGTTTGAAACACACAACCGCATGTGCATG
TGTGGGAGATCTCCGATTTTGTGTACCTCCTCTACAACTCCCGGGGATTC
AAAATGTTCTTCTTCAATTTGGGGACAAATGCCTGTCAACGACGGCCATC
TGCAACCATCTGTTGTCGGTGCGCGACCAAACCGGCGTGACGAAGAATGC
CCTACTTTTCTTTGTCCTCACAAGCCATCGGATCGTGAATCGGTGCTCTC
TAGCCTTCTTCTGGTCGAACAATGGCGATTATTTTCGAACGGTCCGAAGT
ATGGCGAAAATTGCAGAAGGGCGCCTACATCGTCGCGTTGGTTGGAAGAG
CCCGATACGTAGAGCCTTGTTTCCCTCCTGGGGATGAAGGGACAAAGTGT
CGCGCTTCGCACTCCGCACAGTGATAGAAACCGCGTCCACGGTTCCTTCT
GAATCCCCACGGGGCGGCACGGTGAGGTTCATCCCGAAACGTTGCAGCGC
AGTGCGGTGCGGCCCTGTCACATCGAGGTGCGGTGCGATGCGGTTTGACC
GCACCGCACCGCACCGCACCGCACCGCACCGCACCGCACCGCACCGCACC
GCACCGCACCACACCGTCGAAAAAAAACGCACCGTGAACGTCGCTGTTTT
TTTTTTTCAAATAATCTGCTGGTGCACGCAAAGCGTATTGTGTACACAGA
GATCGTTGGAATGTGTGTGATGGCTACGGGCAGGAACATCTATCGCATGC
AATTTATCGGTTTTTCCGAGGCGTCGGGGACGGCCGCAGTAGACGCGATA
CTCTTTGGTTGACCCGTTGTTCCGCGTAACTTTTCCTGTTTTTTGGATCA
CCTCGTGCAGGACAACTCTGAGTGCAACAACAGAGGTGACAAGGATTCAG
GTACGAAAAGGACCAGCAAACAAAGGAGAGCGGAGGGAGGACTGCGTTTG
GCACTGGTGGTGAATGGCAGTCAGTACTGTATACTGCCGGCCAACTTTGT
CATCCCACCTGCACGACCTCTTTGCGAAGTATCTACTATTCTGCATTCGC
AACCACGGTGCCCTGCTTGCTGCGTCCCGTGTCTATGTTGCACACAGGCT
CGATGCCTCCTGCTGGTTTGGAATTCGAGATTGGTGATTGGGCTATGGCA
GCCAAGGTAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1628:4565..13674+ >mRNA_Ecto-sp13_S_contig1628.4550.1 ID=mRNA_Ecto-sp13_S_contig1628.4550.1|Name=mRNA_Ecto-sp13_S_contig1628.4550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=342bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1628:4565..13674+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCACCGTCGCTCACGCCCCCGTACCTACTGCATGCAGCGTGCTTCAGCG
GATAACCTCCGGCAGATCGAGGACGAGCGTTCGGTGTCCCCCCACTGAAT
ACATTGGTCTTTCCCCTTGTTGCAGCCTCCGGACAATCGGCAGCGACAAG
GCAAGGGCGGTAGTCGAGGCAACAGGGGCGGCCAAAGCTGAAACAGCAGC
CTTGGAATCATGTATTGACCCGCCGGTCGTGAGGGACAGGACAACTCTGA
GTGCAACAACAGAGGTGACAAGGATTCAGGCTCGATGCCTCCTGCTGGTT
TGGAATTCGAGATTGGTGATTGGGCTATGGCAGCCAAGGTAA back to top
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