prot_Ecto-sp13_S_contig16274.4547.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16274.4547.1
Unique Nameprot_Ecto-sp13_S_contig16274.4547.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp13_S_contig16274.4547.1 vs. uniprot
Match: A0A6H5KFI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI5_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 6.300e-63
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0
Query:    1 LGAGAQGSTEHAGGAGGRASSSSVVAILELQDPESGLLASASRAFIRYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLV---------FSHETMGFGTVHLYLARPRPNTR 116
            L AGA G+T+ AGGAGG+ASSSSVVAILELQDPESGLLASASRAFI+YGAP+LGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLV         FSHETMGFGTVHLYLARPRPNTR
Sbjct:  200 LDAGAHGATDDAGGAGGQASSSSVVAILELQDPESGLLASASRAFIKYGAPLLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVAPLPPGLEVFSHETMGFGTVHLYLARPRPNTR 324          
BLAST of mRNA_Ecto-sp13_S_contig16274.4547.1 vs. uniprot
Match: D8LTT5_ECTSI (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT5_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 3.390e-47
Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0
Query:    1 LGAGAQGSTEHAGGAGGRASSSSVVAILELQDPESGLLASASRAFIRYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLV 93
            L AGAQG+TE AGGAGG ASSSSVVAILELQDPESGLLASA+RAFI+YGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALM DAGKIHLV
Sbjct:  152 LDAGAQGATEDAGGAGGHASSSSVVAILELQDPESGLLASATRAFIKYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMGDAGKIHLV 244          
BLAST of mRNA_Ecto-sp13_S_contig16274.4547.1 vs. uniprot
Match: A0A0G4EH38_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EH38_VITBC)

HSP 1 Score: 62.8 bits (151), Expect = 3.110e-9
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   25 VAILELQDPE-SGLLASASRAFIRYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVFSHETMGFGTVHLYLARPR 112
            +AILE+ +P  +GLLA  +R FIR  A V  W +SG   EY HL +SI  FP   ++  +++ AG    V   ETMGFGTV +++A P+
Sbjct:  205 LAILEISEPAGTGLLARLARWFIRLNALVGAW-LSGRRREYRHLLDSIQAFPKQDDFCYMIDKAG--FTVLGVETMGFGTVKIFVAEPK 290          
BLAST of mRNA_Ecto-sp13_S_contig16274.4547.1 vs. uniprot
Match: A0A1H9ZTT1_9DELT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=2 Tax=Stigmatella erecta TaxID=83460 RepID=A0A1H9ZTT1_9DELT)

HSP 1 Score: 51.6 bits (122), Expect = 3.220e-5
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   25 VAILELQDPESGLLASASRAFIRYGAPVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVFSHETMGFGTVHLYLARPR 112
            +AILEL +P+ GLL    R  IR   P LG  +SG+G EY +L+ SI  FP    +  +M +AG + ++  H+ +  G   L++A+PR
Sbjct:  230 IAILELSEPQGGLLGPLLRFQIRKVVPWLGAKLSGSG-EYRYLQESIAAFPQPEAFADIMREAG-LEVLQVHK-LTLGVCCLFVAQPR 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16274.4547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KFI5_9PHAE6.300e-6386.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTT5_ECTSI3.390e-4792.47Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
A0A0G4EH38_VITBC3.110e-943.82Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A1H9ZTT1_9DELT3.220e-538.64Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 20..109
e-value: 1.9E-6
score: 29.4
IPR004033UbiE/COQ5 methyltransferasePFAMPF01209Ubie_methyltrancoord: 24..106
e-value: 5.1E-8
score: 32.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16274contigEcto-sp13_S_contig16274:1806..3950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16274.4547.1mRNA_Ecto-sp13_S_contig16274.4547.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16274 1806..3950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16274.4547.1 ID=prot_Ecto-sp13_S_contig16274.4547.1|Name=mRNA_Ecto-sp13_S_contig16274.4547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
LGAGAQGSTEHAGGAGGRASSSSVVAILELQDPESGLLASASRAFIRYGA
PVLGWVMSGNGAEYGHLKNSILRFPSVSEWTALMEDAGKIHLVFSHETMG
FGTVHLYLARPRPNTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004033UbiE/COQ5_MeTrFase