prot_Ecto-sp13_S_contig16259.4538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16259.4538.1
Unique Nameprot_Ecto-sp13_S_contig16259.4538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length189
Homology
BLAST of mRNA_Ecto-sp13_S_contig16259.4538.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 1.700e-86
Identity = 156/185 (84.32%), Postives = 161/185 (87.03%), Query Frame = 0
Query:    1 MPRQTRQASSPATNPSPSTAGSFPPAXXXXXXXXXXXXXXXXXXXXXXXAGSPEQVPADRELQYLCPRTGCNTNLSLKENIRKDRADYPVCRNFSAGTCAWTGLLIKYPGKVSWLCASEFEVGEVVWAYTIPDVERPACYMNRCLNAEACIVLKEDGVPANVRLAGEDD---VGKRCRDCKRARP 182
            MPRQ+RQASSPAT P           XXXXXXXXXXXXXXXXXXXXXXX  SPEQVPADRELQYLCPRTGCNTNL LKENIRKDRADYP CRNF+AGTCAWTGLLIKYPGKV WLCASEFEVGEVVWA+TIPDVERPAC++N CLNAEACIVLK DGVP NVRLAGEDD   VGKRCRDCKRA P
Sbjct:    1 MPRQSRQASSPATKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEQVPADRELQYLCPRTGCNTNLFLKENIRKDRADYPACRNFNAGTCAWTGLLIKYPGKVCWLCASEFEVGEVVWAHTIPDVERPACHINWCLNAEACIVLKGDGVPVNVRLAGEDDANCVGKRCRDCKRADP 185          
BLAST of mRNA_Ecto-sp13_S_contig16259.4538.1 vs. uniprot
Match: D8LET1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET1_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 4.190e-66
Identity = 104/132 (78.79%), Postives = 109/132 (82.58%), Query Frame = 0
Query:   51 GSPEQVPADRELQYLCPRTGCNTNLSLKENIRKDRADYPVCRNFSAGTCAWTG--LLIKYPGKVSWLCASEFEVGEVVWAYTIPDVERPACYMNRCLNAEACIVLKEDGVPANVRLAGEDDVGKRCRDCKRA 180
            GSPEQVPADRELQ+LCP TGCNTNL LKENI KDRADY  C    AGT A     LLIKYPGKV WLCASEFEVGEVVWAYT PDVERPACY+N CLN +ACI+LKE+G P NVRLAGEDDV KRC DCKRA
Sbjct:   53 GSPEQVPADRELQHLCPGTGCNTNLFLKENIHKDRADY--CTT-PAGTLAPVPARLLIKYPGKVCWLCASEFEVGEVVWAYTTPDVERPACYINWCLNEDACIILKEEGAPVNVRLAGEDDVAKRCSDCKRA 181          
BLAST of mRNA_Ecto-sp13_S_contig16259.4538.1 vs. uniprot
Match: D8LKW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW7_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.090e-58
Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 0
Query:   55 QVPADRELQYLCPRTGCNTNLSLKENIRKDRADYPVCRNFSAGTCAWTGLLIKYPGKVSWLCASEFEVGEVVWAYTIPDVERPACYMNRCLNAEACIVLKEDGVPANVRLAGEDDV 170
            +  ADRE QYLCP TGCNTNL       KDRADYP CR FS GTC WTGLLIKYPG V WLCASEFEVGEVVWAYTIPDVERPACY+  CLN +A I+LKE+GVP N RLAGEDDV
Sbjct:   99 RAKADREPQYLCPGTGCNTNL------HKDRADYPACRTFSVGTCVWTGLLIKYPGNVCWLCASEFEVGEVVWAYTIPDVERPACYITWCLNGDAGIILKEEGVPVNARLAGEDDV 208          
BLAST of mRNA_Ecto-sp13_S_contig16259.4538.1 vs. uniprot
Match: D7FWQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ2_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.280e-15
Identity = 35/45 (77.78%), Postives = 36/45 (80.00%), Query Frame = 0
Query:   51 GSPEQVPADRELQYLCPRTGCNTNLSLKENIRKDRADYPVCRNFS 95
            GS EQVPADRE QYLCP TGCNTNL LKENI K RADYP CR  +
Sbjct:   83 GSAEQVPADRESQYLCPGTGCNTNLFLKENIHKGRADYPACRTLA 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16259.4538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KCU2_9PHAE1.700e-8684.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LET1_ECTSI4.190e-6678.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKW7_ECTSI1.090e-5875.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWQ2_ECTSI1.280e-1577.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16259contigEcto-sp13_S_contig16259:593..2476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16259.4538.1mRNA_Ecto-sp13_S_contig16259.4538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16259 593..2907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16259.4538.1 ID=prot_Ecto-sp13_S_contig16259.4538.1|Name=mRNA_Ecto-sp13_S_contig16259.4538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
MPRQTRQASSPATNPSPSTAGSFPPAASSAAPAPPPARAAGSSASAGSSA
GSPEQVPADRELQYLCPRTGCNTNLSLKENIRKDRADYPVCRNFSAGTCA
WTGLLIKYPGKVSWLCASEFEVGEVVWAYTIPDVERPACYMNRCLNAEAC
IVLKEDGVPANVRLAGEDDVGKRCRDCKRARPYWTRTS*
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